RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GAGE12IP0CL82 117 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 TMEM136Q6ZRR5 245 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 EVI2AP22794 236 aa16.82■□□□□ 0.28
TSPAN4-202ENST00000397396 ZFP2Q6ZN57 461 aa16.81■□□□□ 0.28
TSPAN4-202ENST00000397396 C14orf178Q8N769 122 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-202ENST00000397396 OR4C5Q8NGB2 326 aa16.81■□□□□ 0.28
TSPAN4-202ENST00000397396 FRZBQ92765 325 aa16.81■□□□□ 0.28
TSPAN4-202ENST00000397396 DEFB130BP0DP73 79 aa16.8■□□□□ 0.28
TSPAN4-202ENST00000397396 DEFB130AP0DP74 79 aa16.8■□□□□ 0.28
TSPAN4-202ENST00000397396 RPS10P46783 165 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-202ENST00000397396 DAD1P61803 113 aa16.8■□□□□ 0.28
TSPAN4-202ENST00000397396 CFAP126Q5VTH2 177 aa16.8■□□□□ 0.28
TSPAN4-202ENST00000397396 FAM104BQ5XKR9 115 aa16.8■□□□□ 0.28
TSPAN4-202ENST00000397396 TRAPPC1Q9Y5R8 145 aa16.8■□□□□ 0.28
TSPAN4-202ENST00000397396 MEGF8Q7Z7M0 2845 aa16.79■□□□□ 0.28
TSPAN4-202ENST00000397396 A0A0J9YWU9 116 aa16.79■□□□□ 0.28
TSPAN4-202ENST00000397396 APCSP02743 223 aa16.78■□□□□ 0.28
TSPAN4-202ENST00000397396 CRYGDP07320 174 aa16.78■□□□□ 0.28
TSPAN4-202ENST00000397396 FAM74A4Q5TZK3 123 aa16.78■□□□□ 0.28
TSPAN4-202ENST00000397396 JPT2Q9H910 190 aa16.78■□□□□ 0.28
TSPAN4-202ENST00000397396 KIF25-AS1Q9Y6Z4 181 aa16.78■□□□□ 0.28
TSPAN4-202ENST00000397396 A0A087WWL8 130 aa16.77■□□□□ 0.28
TSPAN4-202ENST00000397396 MGPP08493 103 aa16.77■□□□□ 0.28
TSPAN4-202ENST00000397396 AMN1Q8IY45 258 aa16.77■□□□□ 0.28
TSPAN4-202ENST00000397396 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-202ENST00000397396 MRPL18Q9H0U6 180 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-202ENST00000397396 ZNF56Q15929 161 aa16.76■□□□□ 0.27
TSPAN4-202ENST00000397396 CELA1Q9UNI1 258 aa16.76■□□□□ 0.27
TSPAN4-202ENST00000397396 PPBPP02775 128 aa16.75■□□□□ 0.27
TSPAN4-202ENST00000397396 RAB4AP20338 218 aa16.75■□□□□ 0.27
TSPAN4-202ENST00000397396 UFSP1Q6NVU6 142 aa16.75■□□□□ 0.27
TSPAN4-202ENST00000397396 POM121L12Q8N7R1 296 aa16.75■□□□□ 0.27
TSPAN4-202ENST00000397396 MRAP2Q96G30 205 aa16.75■□□□□ 0.27
TSPAN4-202ENST00000397396 SAMD10Q9BYL1 202 aa16.75■□□□□ 0.27
TSPAN4-202ENST00000397396 FABP9Q0Z7S8 132 aa16.74■□□□□ 0.27
TSPAN4-202ENST00000397396 F5H697 171 aa16.73■□□□□ 0.27
TSPAN4-202ENST00000397396 H7C1H1 209 aa16.73■□□□□ 0.27
TSPAN4-202ENST00000397396 ATP5G1P05496 136 aa16.73■□□□□ 0.27
TSPAN4-202ENST00000397396 SLAQ13239 276 aa16.73■□□□□ 0.27
TSPAN4-202ENST00000397396 C11orf45Q8TAV5 145 aa16.73■□□□□ 0.27
TSPAN4-202ENST00000397396 RNF185Q96GF1 192 aa16.73■□□□□ 0.27
TSPAN4-202ENST00000397396 LINC00315P59091 139 aa16.72■□□□□ 0.27
TSPAN4-202ENST00000397396 ZNF479Q96JC4 524 aa16.72■□□□□ 0.27
TSPAN4-202ENST00000397396 NBEAL2Q6ZNJ1 2754 aa16.72■□□□□ 0.27
TSPAN4-202ENST00000397396 PPP1R17O96001 155 aa16.71■□□□□ 0.27
TSPAN4-202ENST00000397396 IGHV3-53P01767 116 aa16.71■□□□□ 0.27
TSPAN4-202ENST00000397396 MRPL51Q4U2R6 128 aaKnown RBP16.71■□□□□ 0.27
TSPAN4-202ENST00000397396 EDA2RQ9HAV5 297 aa16.71■□□□□ 0.27
TSPAN4-202ENST00000397396 TRGV4A0A0C4DH28 118 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 CKS2P33552 79 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 ORMDL3Q8N138 153 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 LAMTOR2Q9Y2Q5 125 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 IGHV3-73A0A0B4J1V6 119 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 TRGC2P03986 189 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 C12orf74Q32Q52 190 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 U3KQK5 164 aa16.7■□□□□ 0.26
TSPAN4-202ENST00000397396 SUMO4Q6EEV6 95 aa16.69■□□□□ 0.26
TSPAN4-202ENST00000397396 TRBV6-4A0A1B0GX49 114 aa16.68■□□□□ 0.26
TSPAN4-202ENST00000397396 D6R8Y8 96 aa16.68■□□□□ 0.26
TSPAN4-202ENST00000397396 GATA1P15976 413 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-202ENST00000397396 PHOX2AO14813 284 aa16.67■□□□□ 0.26
TSPAN4-202ENST00000397396 TRBV10-1A0A0K0K1A3 114 aa16.66■□□□□ 0.26
TSPAN4-202ENST00000397396 C1orf196B1AJZ1 125 aa16.66■□□□□ 0.26
TSPAN4-202ENST00000397396 K7EQD1 137 aa16.66■□□□□ 0.26
TSPAN4-202ENST00000397396 FHL2Q14192 279 aa16.66■□□□□ 0.26
TSPAN4-202ENST00000397396 RHOHQ15669 191 aa16.66■□□□□ 0.26
TSPAN4-202ENST00000397396 PRELID3AQ96N28 172 aa16.66■□□□□ 0.26
TSPAN4-202ENST00000397396 PRO0255Q9UI72 69 aa16.66■□□□□ 0.26
TSPAN4-202ENST00000397396 TRAV26-2A0A0B4J265 109 aa16.65■□□□□ 0.26
TSPAN4-202ENST00000397396 KIAA1644Q3SXP7 199 aa16.65■□□□□ 0.26
TSPAN4-202ENST00000397396 PRADC1Q9BSG0 188 aa16.65■□□□□ 0.26
TSPAN4-202ENST00000397396 NACAE9PAV3 2078 aa16.64■□□□□ 0.26
TSPAN4-202ENST00000397396 M0QY20 66 aa16.64■□□□□ 0.25
TSPAN4-202ENST00000397396 DNAJC30Q96LL9 226 aa16.64■□□□□ 0.25
TSPAN4-202ENST00000397396 HUWE1Q7Z6Z7 4374 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-202ENST00000397396 DNAH9Q9NYC9 4486 aa16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 NCR2O95944 276 aa16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 SRIP30626 198 aa16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 NANOS2P60321 138 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 OR10J3Q5JRS4 329 aa16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 Q6ZTC4 211 aa16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 ALKBH7Q9BT30 221 aaPredicted RBP16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 NIT2Q9NQR4 276 aa16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 HHLA3Q9XRX5 114 aa16.63■□□□□ 0.25
TSPAN4-202ENST00000397396 F5H768 121 aa16.62■□□□□ 0.25
TSPAN4-202ENST00000397396 TRAV10A0A0B4J240 114 aa16.61■□□□□ 0.25
TSPAN4-202ENST00000397396 SMKR1H3BMG3 65 aa16.61■□□□□ 0.25
TSPAN4-202ENST00000397396 HTN3P15516 51 aa16.61■□□□□ 0.25
TSPAN4-202ENST00000397396 HOXA5P20719 270 aa16.61■□□□□ 0.25
TSPAN4-202ENST00000397396 RAB5BP61020 215 aa16.61■□□□□ 0.25
TSPAN4-202ENST00000397396 SLC25A29Q8N8R3 303 aa16.61■□□□□ 0.25
TSPAN4-202ENST00000397396 C20orf78Q9BR46 151 aa16.61■□□□□ 0.25
TSPAN4-202ENST00000397396 TRBV6-5A0A0K0K1A5 114 aa16.6■□□□□ 0.25
TSPAN4-202ENST00000397396 TNFRSF6BO95407 300 aa16.6■□□□□ 0.25
TSPAN4-202ENST00000397396 CRYBA4P53673 196 aa16.6■□□□□ 0.25
TSPAN4-202ENST00000397396 RPL36AP83881 106 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-202ENST00000397396 Q6ZSN1 163 aa16.6■□□□□ 0.25
TSPAN4-202ENST00000397396 NRACQ8N912 160 aa16.6■□□□□ 0.25
TSPAN4-202ENST00000397396 RPL36ALQ969Q0 106 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-202ENST00000397396 PAX4O43316 350 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms