RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 CRLF1O75462 422 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 IGKCP01834 107 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 CD7P09564 240 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 TRAV12-2A0A075B6T6 113 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 A0A0J9YX75 114 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 C7orf71A4D174 169 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 K7EQG2 157 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
RAPGEF3-203ENST00000395360 LGALS9O00182 355 aa11.54□□□□□ -0.56
RAPGEF3-203ENST00000395360 TMEM86BQ8N661 226 aa11.54□□□□□ -0.56
RAPGEF3-203ENST00000395360 TAX1BP3O14907 124 aa11.54□□□□□ -0.56
RAPGEF3-203ENST00000395360 OCIAD2Q56VL3 154 aa11.54□□□□□ -0.56
RAPGEF3-203ENST00000395360 ERASQ7Z444 233 aa11.54□□□□□ -0.56
RAPGEF3-203ENST00000395360 NXPH4O95158 308 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 TMEM97Q5BJF2 176 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 JPT2Q9H910 190 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 FN1P02751 2386 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 IGKV2D-26A0A0A0MRZ7 120 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 DPM2O94777 84 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 DEFB136Q30KP8 78 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 C18orf65Q6ZTR6 163 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 OR9G4Q8NGQ1 327 aa11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 ZNF418Q8TF45 676 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 MRPL35Q9NZE8 188 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-203ENST00000395360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 LINC00315P59091 139 aa11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 ZC2HC1BQ5TFG8 222 aa11.52□□□□□ -0.57
RAPGEF3-203ENST00000395360 TCTEX1D4Q5JR98 221 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 GTSCR1Q86UQ5 136 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 A0A087WWL8 130 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 SIVA1O15304 175 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 SLURP1P55000 103 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 POM121L12Q8N7R1 296 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 TOMM6Q96B49 74 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
RAPGEF3-203ENST00000395360 A0A087WX48 190 aa11.5□□□□□ -0.57
RAPGEF3-203ENST00000395360 PPP1R17O96001 155 aa11.5□□□□□ -0.57
RAPGEF3-203ENST00000395360 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
RAPGEF3-203ENST00000395360 K7EMI3 77 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 HILS1P60008 231 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 VAMP3Q15836 100 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 SCGB3A1Q96QR1 104 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 CUBNO60494 3623 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 IGHV3-16A0A0C4DH30 117 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 SEC11AP67812 179 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 Q8N1Y9 231 aa11.49□□□□□ -0.57
RAPGEF3-203ENST00000395360 K7ERU9 68 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 C2orf66Q6UXQ4 117 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 Q8N2B8 174 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 DNAJC9-AS1A6NH13 148 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 F5H697 171 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 HSD52Q0P140 79 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 SUMO4Q6EEV6 95 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 FOXI2Q6ZQN5 318 aa11.48□□□□□ -0.57
RAPGEF3-203ENST00000395360 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 OR11H1Q8NG94 326 aa11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 C9orf85Q96MD7 179 aa11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 TEP1Q99973 2627 aaKnown RBP11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 IGHV1OR15-1A0A075B7D0 117 aa11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 PLNP26678 52 aa11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 KHDC1LQ5JSQ8 128 aa11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 DEFB104AQ8WTQ1 72 aa11.47□□□□□ -0.57
RAPGEF3-203ENST00000395360 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.57
RAPGEF3-203ENST00000395360 F8VRH5 84 aa11.46□□□□□ -0.57
RAPGEF3-203ENST00000395360 H7C1H1 209 aa11.46□□□□□ -0.57
RAPGEF3-203ENST00000395360 LINC01619G3V211 115 aa11.46□□□□□ -0.58
RAPGEF3-203ENST00000395360 RNASE1P07998 156 aaKnown RBP11.46□□□□□ -0.58
RAPGEF3-203ENST00000395360 HIST2H2BDQ6DRA6 164 aa11.46□□□□□ -0.58
RAPGEF3-203ENST00000395360 AMTNQ6UX39 209 aa11.46□□□□□ -0.58
RAPGEF3-203ENST00000395360 NEXN-AS1Q8NBZ9 246 aa11.46□□□□□ -0.58
RAPGEF3-203ENST00000395360 ESM1Q9NQ30 184 aa11.46□□□□□ -0.58
RAPGEF3-203ENST00000395360 SYT8Q8NBV8 401 aa11.44□□□□□ -0.58
RAPGEF3-203ENST00000395360 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
RAPGEF3-203ENST00000395360 A6NDN8 102 aa11.44□□□□□ -0.58
RAPGEF3-203ENST00000395360 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
RAPGEF3-203ENST00000395360 POLR2KP53803 58 aaKnown RBP11.44□□□□□ -0.58
RAPGEF3-203ENST00000395360 DEFB131AP59861 70 aa11.44□□□□□ -0.58
RAPGEF3-203ENST00000395360 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
RAPGEF3-203ENST00000395360 TRBV25-1A0A075B6N4 114 aa11.43□□□□□ -0.58
RAPGEF3-203ENST00000395360 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
RAPGEF3-203ENST00000395360 HLA-DRB4P13762 266 aa11.43□□□□□ -0.58
RAPGEF3-203ENST00000395360 C4orf3Q8WVX3 66 aa11.43□□□□□ -0.58
RAPGEF3-203ENST00000395360 HLA-DRB4X5D2U9 266 aa11.43□□□□□ -0.58
RAPGEF3-203ENST00000395360 SDHAF1A6NFY7 115 aa11.43□□□□□ -0.58
RAPGEF3-203ENST00000395360 ZNF56Q15929 161 aa11.43□□□□□ -0.58
RAPGEF3-203ENST00000395360 HTN1P15515 57 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 RPL32P62910 135 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 TMEM61Q8N0U2 210 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 KIR2DL4Q99706 377 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms