RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 Q8N1Y9 231 aa11.34□□□□□ -0.59
CPSF7-202ENST00000394888 UBE2E2Q96LR5 201 aa11.34□□□□□ -0.59
CPSF7-202ENST00000394888 H3BRM9 83 aa11.33□□□□□ -0.59
CPSF7-202ENST00000394888 COX6B1P14854 86 aa11.33□□□□□ -0.59
CPSF7-202ENST00000394888 K7EMI3 77 aa11.33□□□□□ -0.6
CPSF7-202ENST00000394888 DEFB136Q30KP8 78 aa11.33□□□□□ -0.6
CPSF7-202ENST00000394888 C9orf118A6NHY6 69 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 PRSS29PA6NIE9 313 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 DUSP14O95147 198 aaKnown RBP11.32□□□□□ -0.6
CPSF7-202ENST00000394888 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 TMEM160Q9NX00 188 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 KMT2BQ9UMN6 2715 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-202ENST00000394888 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 A0A087WWL8 130 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 F8VRH5 84 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 C2orf66Q6UXQ4 117 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 SMIM15Q7Z3B0 74 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 TM2D2Q9BX73 214 aa11.32□□□□□ -0.6
CPSF7-202ENST00000394888 ELANEP08246 267 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 SLURP1P55000 103 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 NAA38Q9BRA0 125 aaKnown RBP11.31□□□□□ -0.6
CPSF7-202ENST00000394888 M0QY20 66 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 TRBV7-3A0A075B6L6 115 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 PRM2P04554 102 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 MGPP08493 103 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 DEFB113Q30KQ7 82 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 ORMDL2Q53FV1 153 aa11.31□□□□□ -0.6
CPSF7-202ENST00000394888 SORL1Q92673 2214 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 TRBV6-5A0A0K0K1A5 114 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 TRBV27A0A0K0K1C4 114 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
CPSF7-202ENST00000394888 SPINK13Q1W4C9 94 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-202ENST00000394888 P0DMU3 169 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
CPSF7-202ENST00000394888 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-202ENST00000394888 CD7P09564 240 aa11.3□□□□□ -0.6
CPSF7-202ENST00000394888 RIPPLY3P57055 190 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 FAM208BQ5VWN6 2430 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 H7C1H1 209 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 PLNP26678 52 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 ID1P41134 155 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 Q9UF83 564 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 K7ERJ3 54 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 AMELXQ99217 191 aa11.29□□□□□ -0.6
CPSF7-202ENST00000394888 EPG5Q9HCE0 2579 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 FAM159AQ6UWV7 190 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 CDKN1BP46527 198 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 VAMP3Q15836 100 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 Q5PR19 223 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 SCGB3A1Q96QR1 104 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
CPSF7-202ENST00000394888 KRTAP1-1Q07627 177 aa11.27□□□□□ -0.61
CPSF7-202ENST00000394888 CEND1Q8N111 149 aa11.27□□□□□ -0.61
CPSF7-202ENST00000394888 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
CPSF7-202ENST00000394888 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.61
CPSF7-202ENST00000394888 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
CPSF7-202ENST00000394888 TSPEAR-AS2P59090 65 aa11.26□□□□□ -0.61
CPSF7-202ENST00000394888 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
CPSF7-202ENST00000394888 ZNRF2Q8NHG8 242 aa11.26□□□□□ -0.61
CPSF7-202ENST00000394888 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
CPSF7-202ENST00000394888 LINC01619G3V211 115 aa11.26□□□□□ -0.61
CPSF7-202ENST00000394888 Q96MF0 132 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 A0A1B0GWB2 263 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 C11orf86A6NJI1 115 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 E9PLD3 99 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 H3BUT2 72 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 ITPR2Q14571 2701 aa11.25□□□□□ -0.61
CPSF7-202ENST00000394888 A0A1W2PPM0 123 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 K7EP34 96 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 FOSL1P15407 271 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 PROK1P58294 105 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-202ENST00000394888 CST9LQ9H4G1 147 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 ESM1Q9NQ30 184 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 H3BMM0 161 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 Q6ZSN1 163 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 OR4C5Q8NGB2 326 aa11.24□□□□□ -0.61
CPSF7-202ENST00000394888 NAV2Q8IVL1 2488 aa11.23□□□□□ -0.61
CPSF7-202ENST00000394888 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
CPSF7-202ENST00000394888 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
CPSF7-202ENST00000394888 C4orf3Q8WVX3 66 aa11.23□□□□□ -0.61
CPSF7-202ENST00000394888 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-202ENST00000394888 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
CPSF7-202ENST00000394888 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
CPSF7-202ENST00000394888 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-202ENST00000394888 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
CPSF7-202ENST00000394888 RAB37Q96AX2 223 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms