RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NDPQ00604 133 aa14.28□□□□□ -0.12
HOXC6-202ENST00000394331 TMEM101Q96IK0 257 aa14.28□□□□□ -0.12
HOXC6-202ENST00000394331 CHCHD5Q9BSY4 110 aa14.28□□□□□ -0.12
HOXC6-202ENST00000394331 RNF223E7ERA6 249 aa14.28□□□□□ -0.12
HOXC6-202ENST00000394331 TSPEAR-AS2P59090 65 aa14.28□□□□□ -0.12
HOXC6-202ENST00000394331 A0A1B0GX51 115 aa14.28□□□□□ -0.12
HOXC6-202ENST00000394331 WIPF1O43516 503 aa14.28□□□□□ -0.12
HOXC6-202ENST00000394331 PMVKQ15126 192 aa14.27□□□□□ -0.13
HOXC6-202ENST00000394331 TMEM170BQ5T4T1 132 aa14.27□□□□□ -0.13
HOXC6-202ENST00000394331 SPTA1P02549 2419 aa14.26□□□□□ -0.13
HOXC6-202ENST00000394331 TMEM141Q96I45 108 aa14.26□□□□□ -0.13
HOXC6-202ENST00000394331 KALRNO60229 2985 aa14.26□□□□□ -0.13
HOXC6-202ENST00000394331 J3QQQ9 107 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 NDUFA7O95182 113 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 ATP5G1P05496 136 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 POM121L12Q8N7R1 296 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 DPH3P1Q9H4G8 78 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 PRAC2D3DTV9 90 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 C2orf82Q6UX34 121 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 C3orf22Q8N5N4 141 aa14.25□□□□□ -0.13
HOXC6-202ENST00000394331 MRPL53Q96EL3 112 aaKnown RBP14.25□□□□□ -0.13
HOXC6-202ENST00000394331 CEP295Q9C0D2 2601 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 IGIPA6NJ69 53 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 TSHBP01222 138 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 ZFP36P26651 326 aaKnown RBP14.24□□□□□ -0.13
HOXC6-202ENST00000394331 ZNF56Q15929 161 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 IGFL4Q6B9Z1 124 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 IGHV7-81A0A0B4J1V7 117 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 ELANEP08246 267 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 CTSGP08311 255 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 LINC00694P0DN24 101 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 LGALS3P17931 250 aaKnown RBP14.24□□□□□ -0.13
HOXC6-202ENST00000394331 ARHGAP32A7KAX9 2087 aa14.24□□□□□ -0.13
HOXC6-202ENST00000394331 A0A0J9YX75 114 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 ATP5J2P56134 94 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 TIMM17AQ99595 171 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 SIRPDQ9H106 197 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 J3KT08 172 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 UQCRQO14949 82 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 ACYP1P07311 99 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 AGPAT4-IT1Q9H0P7 198 aa14.23□□□□□ -0.13
HOXC6-202ENST00000394331 IGHV3-23P01764 117 aa14.22□□□□□ -0.13
HOXC6-202ENST00000394331 Q8N9W7 124 aa14.22□□□□□ -0.13
HOXC6-202ENST00000394331 SMIM9A6NGZ8 99 aa14.21□□□□□ -0.13
HOXC6-202ENST00000394331 H7C423 109 aa14.21□□□□□ -0.13
HOXC6-202ENST00000394331 RPS28P62857 69 aaKnown RBP14.21□□□□□ -0.13
HOXC6-202ENST00000394331 LINC00526Q96FQ7 95 aa14.21□□□□□ -0.13
HOXC6-202ENST00000394331 LEPROTO15243 131 aa14.21□□□□□ -0.14
HOXC6-202ENST00000394331 IGHV4-39P01824 125 aa14.21□□□□□ -0.14
HOXC6-202ENST00000394331 ZNF876PQ49A33 203 aa14.21□□□□□ -0.14
HOXC6-202ENST00000394331 RPL39LQ96EH5 51 aaKnown RBP14.21□□□□□ -0.14
HOXC6-202ENST00000394331 TRIAP1O43715 76 aa14.2□□□□□ -0.14
HOXC6-202ENST00000394331 UBE2E1P51965 193 aa14.2□□□□□ -0.14
HOXC6-202ENST00000394331 Q1RN00 199 aa14.2□□□□□ -0.14
HOXC6-202ENST00000394331 C9orf153Q5TBE3 101 aa14.2□□□□□ -0.14
HOXC6-202ENST00000394331 FAM110DQ8TAY7 271 aaPredicted RBP14.2□□□□□ -0.14
HOXC6-202ENST00000394331 SDHAF1A6NFY7 115 aa14.2□□□□□ -0.14
HOXC6-202ENST00000394331 NPFFO15130 113 aa14.2□□□□□ -0.14
HOXC6-202ENST00000394331 C9orf47Q6ZRZ4 202 aa14.2□□□□□ -0.14
HOXC6-202ENST00000394331 MED14OSP0DP75 135 aa14.19□□□□□ -0.14
HOXC6-202ENST00000394331 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.19□□□□□ -0.14
HOXC6-202ENST00000394331 MUSTN1Q8IVN3 82 aa14.19□□□□□ -0.14
HOXC6-202ENST00000394331 C14orf178Q8N769 122 aaPredicted RBP14.19□□□□□ -0.14
HOXC6-202ENST00000394331 FAM236AA0A1B0GUQ0 79 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 FAM236BA0A1B0GV22 79 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 METTL26Q96S19 204 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 LENEPQ9Y5L5 61 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 KLK9Q2XQG4 91 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 ZNRF2Q8NHG8 242 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 KLK9Q9UKQ9 250 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
HOXC6-202ENST00000394331 A0A1W2PPR1 153 aa14.17□□□□□ -0.14
HOXC6-202ENST00000394331 TMEM223A0PJW6 202 aa14.17□□□□□ -0.14
HOXC6-202ENST00000394331 ZZEF1O43149 2961 aa14.17□□□□□ -0.14
HOXC6-202ENST00000394331 H7C2G1 150 aa14.17□□□□□ -0.14
HOXC6-202ENST00000394331 C15orf32Q32M92 178 aa14.17□□□□□ -0.14
HOXC6-202ENST00000394331 GPHB5Q86YW7 130 aa14.17□□□□□ -0.14
HOXC6-202ENST00000394331 TRGV11A0A075B6L2 103 aa14.16□□□□□ -0.14
HOXC6-202ENST00000394331 HERVK_113P63121 156 aa14.16□□□□□ -0.14
HOXC6-202ENST00000394331 COX6CP09669 75 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 ECSCRQ19T08 205 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 RNF182Q8N6D2 247 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 UBTD1Q9HAC8 227 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 ICOSQ9Y6W8 199 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 IGHV4OR15-8A0A075B7B6 117 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 A0A087WW49 117 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 C3orf56Q8N813 242 aa14.15□□□□□ -0.14
HOXC6-202ENST00000394331 BUB3O43684 328 aa14.14□□□□□ -0.15
HOXC6-202ENST00000394331 EMP1P54849 157 aa14.14□□□□□ -0.15
HOXC6-202ENST00000394331 SAA4P35542 130 aa14.14□□□□□ -0.15
HOXC6-202ENST00000394331 TMEM219Q86XT9 240 aa14.14□□□□□ -0.15
HOXC6-202ENST00000394331 LST1O00453 97 aa14.14□□□□□ -0.15
HOXC6-202ENST00000394331 ATP6V0E1O15342 81 aa14.14□□□□□ -0.15
HOXC6-202ENST00000394331 TRAV25A0A0B4J276 109 aa14.13□□□□□ -0.15
HOXC6-202ENST00000394331 FAM19A5Q7Z5A7 132 aaPredicted RBP14.13□□□□□ -0.15
HOXC6-202ENST00000394331 ZFAND3Q9H8U3 227 aa14.13□□□□□ -0.15
HOXC6-202ENST00000394331 IGHV3-35A0A0C4DH35 117 aa14.13□□□□□ -0.15
HOXC6-202ENST00000394331 DUX3Q96PT4 197 aa14.12□□□□□ -0.15
HOXC6-202ENST00000394331 DCHS1Q96JQ0 3298 aa14.12□□□□□ -0.15
HOXC6-202ENST00000394331 IGHV3OR16-8A0A075B7F1 116 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms