RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 DLX4Q92988 240 aaPredicted RBP6.69□□□□□ -1.34
TDP1-202ENST00000393452 JPT2Q9H910 190 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 ESM1Q9NQ30 184 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 PDZD2O15018 2839 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 NUDT3O95989 172 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 HLA-DRB4P13762 266 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 BVES-AS1Q5T3Y7 98 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 DUX3Q96PT4 197 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 FOXC2Q99958 501 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 HLA-DRB4X5D2U9 266 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 ACANP16112 2415 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 H3BMM0 161 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 DEFB131AP59861 70 aa6.68□□□□□ -1.34
TDP1-202ENST00000393452 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.67□□□□□ -1.34
TDP1-202ENST00000393452 IGKCP01834 107 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 POLR2KP53803 58 aaKnown RBP6.67□□□□□ -1.34
TDP1-202ENST00000393452 DEFB114Q30KQ6 69 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 KHDC1LQ5JSQ8 128 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 SUMO4Q6EEV6 95 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 CHTOPQ9Y3Y2 248 aaKnown RBP6.67□□□□□ -1.34
TDP1-202ENST00000393452 A0A087WWL8 130 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 A0A087WX48 190 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 KNCNA6PVL3 124 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 DPM2O94777 84 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 CRYGDP07320 174 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 RBMY1A1P0DJD3 496 aaKnown RBP6.67□□□□□ -1.34
TDP1-202ENST00000393452 RBMY1CP0DJD4 496 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 FHL3Q13643 280 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 RBMY1FQ15415 496 aaKnown RBP6.67□□□□□ -1.34
TDP1-202ENST00000393452 SYT8Q8NBV8 401 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 CSTL1Q9H114 145 aa6.67□□□□□ -1.34
TDP1-202ENST00000393452 WNK1Q9H4A3 2382 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 TRBV6-5A0A0K0K1A5 114 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 SIVA1O15304 175 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 RIPPLY3P57055 190 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 C2orf66Q6UXQ4 117 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
TDP1-202ENST00000393452 RBMY1BA6NDE4 496 aaKnown RBP6.66□□□□□ -1.34
TDP1-202ENST00000393452 RBMY1EA6NEQ0 496 aaKnown RBP6.66□□□□□ -1.34
TDP1-202ENST00000393452 RBMY1DP0C7P1 496 aaKnown RBP6.66□□□□□ -1.34
TDP1-202ENST00000393452 PCP2Q8IVA1 136 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 RAX2Q96IS3 184 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 MAP6D1Q9H9H5 199 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 ZNF256Q9Y2P7 627 aaPredicted RBP6.66□□□□□ -1.34
TDP1-202ENST00000393452 COX11Q9Y6N1 276 aa6.66□□□□□ -1.34
TDP1-202ENST00000393452 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
TDP1-202ENST00000393452 TRBV27A0A0K0K1C4 114 aa6.65□□□□□ -1.34
TDP1-202ENST00000393452 CD300EQ496F6 205 aaPredicted RBP6.65□□□□□ -1.34
TDP1-202ENST00000393452 HIST2H2BDQ6DRA6 164 aa6.65□□□□□ -1.34
TDP1-202ENST00000393452 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
TDP1-202ENST00000393452 DYNLRB2Q8TF09 96 aa6.65□□□□□ -1.34
TDP1-202ENST00000393452 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.34
TDP1-202ENST00000393452 SPAG8Q99932 426 aaPredicted RBP6.65□□□□□ -1.34
TDP1-202ENST00000393452 ITPR2Q14571 2701 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 LINC01549A6NIU2 74 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 F5H697 171 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 F8VRH5 84 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 M0QY20 66 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 VCYO14598 125 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 RNASE1P07998 156 aaKnown RBP6.65□□□□□ -1.35
TDP1-202ENST00000393452 NMUP48645 174 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 ZC2HC1BQ5TFG8 222 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 ERASQ7Z444 233 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 C16orf95Q9H693 158 aa6.65□□□□□ -1.35
TDP1-202ENST00000393452 TRAV25A0A0B4J276 109 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 SDHAF1A6NFY7 115 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 PLNP26678 52 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 TCTAP57738 103 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 ZNF876PQ49A33 203 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 RNASE8Q8TDE3 154 aaKnown RBP6.64□□□□□ -1.35
TDP1-202ENST00000393452 CLUHP3Q96NS8 147 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 YAE1D1Q9NRH1 226 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 AKAP9Q99996 3911 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 CBY3A6NI87 242 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 H7C1H1 209 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 CCL25O15444 150 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 CD28P10747 220 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 RBX1P62877 108 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 TMEM97Q5BJF2 176 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 FAM74A4Q5TZK3 123 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 MORN3Q6PF18 240 aaPredicted RBP6.64□□□□□ -1.35
TDP1-202ENST00000393452 ZFP2Q6ZN57 461 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 NEGR1Q7Z3B1 354 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 LINC01006Q8NI28 216 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 TMEM160Q9NX00 188 aa6.64□□□□□ -1.35
TDP1-202ENST00000393452 NACAE9PAV3 2078 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 MTORP42345 2549 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 CCL24O00175 119 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 SEC11AP67812 179 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 PIK3CD-AS1Q5SR53 167 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 Q6ZVH6 145 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 BAALCQ8WXS3 180 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
TDP1-202ENST00000393452 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms