RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 HLA-DRB4P13762 266 aa18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 ZNF124Q15973 351 aa18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 SYT8Q8NBV8 401 aa18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 HLA-DRB4X5D2U9 266 aa18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 RBMY1A1P0DJD3 496 aaKnown RBP18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 RBMY1CP0DJD4 496 aa18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 NMUP48645 174 aa18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 RBMY1FQ15415 496 aaKnown RBP18.9■□□□□ 0.62
SMARCD3-203ENST00000392811 A8MTW9 85 aa18.89■□□□□ 0.61
SMARCD3-203ENST00000392811 F5H697 171 aa18.89■□□□□ 0.61
SMARCD3-203ENST00000392811 H3BMM0 161 aa18.89■□□□□ 0.61
SMARCD3-203ENST00000392811 YAE1D1Q9NRH1 226 aa18.89■□□□□ 0.61
SMARCD3-203ENST00000392811 MRPL35Q9NZE8 188 aaKnown RBP18.89■□□□□ 0.61
SMARCD3-203ENST00000392811 DEFB114Q30KQ6 69 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 Q6ZVH6 145 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 NEGR1Q7Z3B1 354 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 A0A087WX48 190 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 FAM74A4Q5TZK3 123 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 PCP2Q8IVA1 136 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 C11orf44Q8N8P7 122 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 SCGB3A1Q96QR1 104 aa18.88■□□□□ 0.61
SMARCD3-203ENST00000392811 RBMY1BA6NDE4 496 aaKnown RBP18.87■□□□□ 0.61
SMARCD3-203ENST00000392811 RBMY1EA6NEQ0 496 aaKnown RBP18.87■□□□□ 0.61
SMARCD3-203ENST00000392811 RBMY1DP0C7P1 496 aaKnown RBP18.87■□□□□ 0.61
SMARCD3-203ENST00000392811 RAX2Q96IS3 184 aa18.87■□□□□ 0.61
SMARCD3-203ENST00000392811 RPL32P62910 135 aaKnown RBP18.86■□□□□ 0.61
SMARCD3-203ENST00000392811 GAGE1Q13065 139 aa18.86■□□□□ 0.61
SMARCD3-203ENST00000392811 AKAP9Q99996 3911 aa18.86■□□□□ 0.61
SMARCD3-203ENST00000392811 TRGV11A0A075B6L2 103 aa18.86■□□□□ 0.61
SMARCD3-203ENST00000392811 C2orf66Q6UXQ4 117 aa18.86■□□□□ 0.61
SMARCD3-203ENST00000392811 MAP6D1Q9H9H5 199 aa18.86■□□□□ 0.61
SMARCD3-203ENST00000392811 TMEM160Q9NX00 188 aa18.86■□□□□ 0.61
SMARCD3-203ENST00000392811 IGKV2D-26A0A0A0MRZ7 120 aa18.85■□□□□ 0.61
SMARCD3-203ENST00000392811 CBY3A6NI87 242 aa18.85■□□□□ 0.61
SMARCD3-203ENST00000392811 A0A1W2PRX2 142 aa18.84■□□□□ 0.61
SMARCD3-203ENST00000392811 CRYGDP07320 174 aa18.84■□□□□ 0.61
SMARCD3-203ENST00000392811 POLR2KP53803 58 aaKnown RBP18.84■□□□□ 0.61
SMARCD3-203ENST00000392811 CD300EQ496F6 205 aaPredicted RBP18.84■□□□□ 0.61
SMARCD3-203ENST00000392811 CD28P10747 220 aa18.84■□□□□ 0.61
SMARCD3-203ENST00000392811 COX11Q9Y6N1 276 aa18.84■□□□□ 0.61
SMARCD3-203ENST00000392811 TRAV12-1A0A0B4J245 112 aa18.83■□□□□ 0.61
SMARCD3-203ENST00000392811 ZC2HC1BQ5TFG8 222 aa18.83■□□□□ 0.61
SMARCD3-203ENST00000392811 GTSCR1Q86UQ5 136 aa18.83■□□□□ 0.61
SMARCD3-203ENST00000392811 NPSP0C0P6 89 aa18.83■□□□□ 0.6
SMARCD3-203ENST00000392811 ZNF876PQ49A33 203 aa18.83■□□□□ 0.6
SMARCD3-203ENST00000392811 ZNF56Q15929 161 aa18.82■□□□□ 0.6
SMARCD3-203ENST00000392811 ORAOV1Q8WV07 137 aa18.82■□□□□ 0.6
SMARCD3-203ENST00000392811 SIVA1O15304 175 aa18.81■□□□□ 0.6
SMARCD3-203ENST00000392811 FHL3Q13643 280 aa18.81■□□□□ 0.6
SMARCD3-203ENST00000392811 TMEM97Q5BJF2 176 aa18.81■□□□□ 0.6
SMARCD3-203ENST00000392811 VCYO14598 125 aa18.81■□□□□ 0.6
SMARCD3-203ENST00000392811 HTN1P15515 57 aa18.81■□□□□ 0.6
SMARCD3-203ENST00000392811 NEXN-AS1Q8NBZ9 246 aa18.81■□□□□ 0.6
SMARCD3-203ENST00000392811 TRBV6-5A0A0K0K1A5 114 aa18.8■□□□□ 0.6
SMARCD3-203ENST00000392811 SDHAF1A6NFY7 115 aa18.8■□□□□ 0.6
SMARCD3-203ENST00000392811 H7C1H1 209 aa18.8■□□□□ 0.6
SMARCD3-203ENST00000392811 PLNP26678 52 aa18.8■□□□□ 0.6
SMARCD3-203ENST00000392811 ZNF256Q9Y2P7 627 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-203ENST00000392811 M0QY20 66 aa18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 CCL24O00175 119 aa18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 MORN3Q6PF18 240 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 DEFB104AQ8WTQ1 72 aa18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 SPAG8Q99932 426 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 F8VRH5 84 aa18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 ZFP2Q6ZN57 461 aa18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 ERASQ7Z444 233 aa18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 BAALCQ8WXS3 180 aa18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 HELZ2Q9BYK8 2649 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-203ENST00000392811 TAX1BP3O14907 124 aa18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 RNASE1P07998 156 aaKnown RBP18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 CITED2Q99967 270 aaPredicted RBP18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 TTTY13Q9BZ97 58 aa18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 CHTOPQ9Y3Y2 248 aaKnown RBP18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 LINC01006Q8NI28 216 aa18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 KIR2DL4Q99706 377 aa18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 CYSLTR1Q9Y271 337 aa18.78■□□□□ 0.6
SMARCD3-203ENST00000392811 ITPR2Q14571 2701 aa18.77■□□□□ 0.6
SMARCD3-203ENST00000392811 TRBV27A0A0K0K1C4 114 aa18.77■□□□□ 0.6
SMARCD3-203ENST00000392811 ACANP16112 2415 aa18.77■□□□□ 0.59
SMARCD3-203ENST00000392811 PRM2P04554 102 aa18.76■□□□□ 0.59
SMARCD3-203ENST00000392811 NF1P21359 2839 aa18.76■□□□□ 0.59
SMARCD3-203ENST00000392811 C16orf95Q9H693 158 aa18.76■□□□□ 0.59
SMARCD3-203ENST00000392811 TP53TG1Q9Y2A0 90 aa18.76■□□□□ 0.59
SMARCD3-203ENST00000392811 HSD52Q0P140 79 aa18.75■□□□□ 0.59
SMARCD3-203ENST00000392811 TRPT1Q86TN4 253 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-203ENST00000392811 CUBNO60494 3623 aa18.74■□□□□ 0.59
SMARCD3-203ENST00000392811 TRAV25A0A0B4J276 109 aa18.74■□□□□ 0.59
SMARCD3-203ENST00000392811 TSSC4Q9Y5U2 329 aaPredicted RBP18.74■□□□□ 0.59
SMARCD3-203ENST00000392811 SEC11AP67812 179 aa18.73■□□□□ 0.59
SMARCD3-203ENST00000392811 ODF3L2Q3SX64 289 aa18.73■□□□□ 0.59
SMARCD3-203ENST00000392811 PRSS29PA6NIE9 313 aa18.73■□□□□ 0.59
SMARCD3-203ENST00000392811 UNC79Q9P2D8 2635 aa18.72■□□□□ 0.59
SMARCD3-203ENST00000392811 ANK3Q12955 4377 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-203ENST00000392811 TSHBP01222 138 aa18.72■□□□□ 0.59
SMARCD3-203ENST00000392811 RIPPLY3P57055 190 aa18.72■□□□□ 0.59
SMARCD3-203ENST00000392811 RPL39P62891 51 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-203ENST00000392811 IGIPA6NJ69 53 aa18.71■□□□□ 0.59
SMARCD3-203ENST00000392811 JMJD8Q96S16 334 aa18.71■□□□□ 0.59
SMARCD3-203ENST00000392811 LINC01549A6NIU2 74 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms