RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 TAL2Q16559 108 aa9.04□□□□□ -0.96
RFC3-201ENST00000380071 FAM74A4Q5TZK3 123 aa9.04□□□□□ -0.96
RFC3-201ENST00000380071 PRADC1Q9BSG0 188 aa9.04□□□□□ -0.96
RFC3-201ENST00000380071 CYSLTR1Q9Y271 337 aa9.04□□□□□ -0.96
RFC3-201ENST00000380071 LGALS1P09382 135 aaKnown RBP9.03□□□□□ -0.96
RFC3-201ENST00000380071 IGHV3-16A0A0C4DH30 117 aa9.03□□□□□ -0.96
RFC3-201ENST00000380071 A0A0J9YX75 114 aa9.03□□□□□ -0.96
RFC3-201ENST00000380071 IGIPA6NJ69 53 aa9.03□□□□□ -0.96
RFC3-201ENST00000380071 RPL24P83731 157 aaKnown RBP9.03□□□□□ -0.96
RFC3-201ENST00000380071 SPINK13Q1W4C9 94 aa9.03□□□□□ -0.96
RFC3-201ENST00000380071 Q8N1Y9 231 aa9.03□□□□□ -0.96
RFC3-201ENST00000380071 LINC01356Q8N9X3 169 aa9.03□□□□□ -0.96
RFC3-201ENST00000380071 KLHL30-AS1Q8NEE0 82 aa9.03□□□□□ -0.96
RFC3-201ENST00000380071 SDHAF1A6NFY7 115 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 TGFAP01135 160 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 GATA3P23771 443 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 CD300EQ496F6 205 aaPredicted RBP9.02□□□□□ -0.97
RFC3-201ENST00000380071 ZNF479Q96JC4 524 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 USP9YO00507 2555 aaPredicted RBP9.02□□□□□ -0.97
RFC3-201ENST00000380071 FBN2P35556 2912 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 C11orf86A6NJI1 115 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 K7EQG2 157 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 VCYO14598 125 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 PLEKHB2Q96CS7 222 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 C9orf85Q96MD7 179 aa9.02□□□□□ -0.97
RFC3-201ENST00000380071 A0A096LNT2 108 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 SNRPD3P62318 126 aaKnown RBP9.01□□□□□ -0.97
RFC3-201ENST00000380071 RPL32P62910 135 aaKnown RBP9.01□□□□□ -0.97
RFC3-201ENST00000380071 SAMD13Q5VXD3 122 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 MORN3Q6PF18 240 aaPredicted RBP9.01□□□□□ -0.97
RFC3-201ENST00000380071 FOXI2Q6ZQN5 318 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 H3BMG7 143 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 LGALS9O00182 355 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 DSCR9P59020 149 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 AMTNQ6UX39 209 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
RFC3-201ENST00000380071 ZNF256Q9Y2P7 627 aaPredicted RBP9.01□□□□□ -0.97
RFC3-201ENST00000380071 POLQO75417 2590 aa9□□□□□ -0.97
RFC3-201ENST00000380071 COX6B1P14854 86 aa9□□□□□ -0.97
RFC3-201ENST00000380071 WFDC2Q14508 124 aa9□□□□□ -0.97
RFC3-201ENST00000380071 PMVKQ15126 192 aa9□□□□□ -0.97
RFC3-201ENST00000380071 MTURNQ8N3F0 131 aa9□□□□□ -0.97
RFC3-201ENST00000380071 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 TMEM238C9JI98 176 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 LINC01619G3V211 115 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 M0QY20 66 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 SCGB2A2Q13296 93 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 ZNF56Q15929 161 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 ODF3Q96PU9 254 aa8.99□□□□□ -0.97
RFC3-201ENST00000380071 HOXD3P31249 432 aaPredicted RBP8.99□□□□□ -0.97
RFC3-201ENST00000380071 OPRPNQ99935 248 aaPredicted RBP8.99□□□□□ -0.97
RFC3-201ENST00000380071 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
RFC3-201ENST00000380071 MXRA5Q9NR99 2828 aa8.98□□□□□ -0.97
RFC3-201ENST00000380071 A0A1B0GWB2 263 aa8.98□□□□□ -0.97
RFC3-201ENST00000380071 TMEM89A2RUT3 159 aa8.98□□□□□ -0.97
RFC3-201ENST00000380071 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
RFC3-201ENST00000380071 SCGB1D4Q6XE38 83 aa8.98□□□□□ -0.97
RFC3-201ENST00000380071 ZNRF2Q8NHG8 242 aa8.98□□□□□ -0.97
RFC3-201ENST00000380071 BEX4Q9NWD9 120 aaPredicted RBP8.98□□□□□ -0.97
RFC3-201ENST00000380071 MYO18BQ8IUG5 2567 aa8.98□□□□□ -0.97
RFC3-201ENST00000380071 ANKRD17O75179 2603 aaKnown RBP8.98□□□□□ -0.97
RFC3-201ENST00000380071 TRBV6-5A0A0K0K1A5 114 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 HOXA3O43365 443 aaPredicted RBP8.97□□□□□ -0.97
RFC3-201ENST00000380071 C18orf65Q6ZTR6 163 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 ZNF702PQ9H963 129 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 CACNA1AO00555 2505 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 PRB1P04280 392 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 ZNF876PQ49A33 203 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 SH2D6Q7Z4S9 175 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 SYT8Q8NBV8 401 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 TIMM17AQ99595 171 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
RFC3-201ENST00000380071 F8W1H4 67 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 PRM2P04554 102 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 RBMY1A1P0DJD3 496 aaKnown RBP8.96□□□□□ -0.97
RFC3-201ENST00000380071 RBMY1CP0DJD4 496 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 P0DMU3 169 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 FAM231AP0DMU4 169 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 FAM231CP0DMU5 169 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 HTN1P15515 57 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 RBMY1FQ15415 496 aaKnown RBP8.96□□□□□ -0.97
RFC3-201ENST00000380071 DEFB136Q30KP8 78 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 TMEM170BQ5T4T1 132 aa8.96□□□□□ -0.97
RFC3-201ENST00000380071 ZNF469Q96JG9 3925 aaPredicted RBP8.96□□□□□ -0.97
RFC3-201ENST00000380071 CENPEQ02224 2701 aa8.96□□□□□ -0.98
RFC3-201ENST00000380071 KNCNA6PVL3 124 aa8.96□□□□□ -0.98
RFC3-201ENST00000380071 SRSF9Q13242 221 aaKnown RBP eCLIP8.96□□□□□ -0.98
RFC3-201ENST00000380071 ETDBQ3ZM63 59 aa8.96□□□□□ -0.98
RFC3-201ENST00000380071 Q6YL49 198 aa8.96□□□□□ -0.98
RFC3-201ENST00000380071 PRO0461Q9UI25 63 aa8.96□□□□□ -0.98
RFC3-201ENST00000380071 J3QLI3 93 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 ELANEP08246 267 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 SLURP1P55000 103 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 TCTEX1D4Q5JR98 221 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 UBE2E2Q96LR5 201 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms