RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 Q8N8P6 123 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 KLHL30-AS1Q8NEE0 82 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 PHLDA1Q8WV24 401 aaPredicted RBP5.75□□□□□ -1.49
CDKL5-202ENST00000379996 DAZ1Q9NQZ3 744 aaKnown RBP5.75□□□□□ -1.49
CDKL5-202ENST00000379996 NXPH4O95158 308 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 SAMD13Q5VXD3 122 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 LCNL1Q6ZST4 164 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 METTL26Q96S19 204 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 TPPP3Q9BW30 176 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 ANK2Q01484 3957 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 IGHV3-11P01762 117 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 CKS2P33552 79 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 TMEM97Q5BJF2 176 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 OR9G4Q8NGQ1 327 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 HIGD1BQ9P298 99 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 HSBP1L1C9JCN9 74 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 CCL24O00175 119 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 C18orf65Q6ZTR6 163 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 PCP2Q8IVA1 136 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 OR11H1Q8NG94 326 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 OR8A1Q8NGG7 326 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 NXT2Q9NPJ8 142 aaKnown RBP5.74□□□□□ -1.49
CDKL5-202ENST00000379996 IGHV3-35A0A0C4DH35 117 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 H3BRM9 83 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 UNQ9165/PRO28630Q6UXU0 137 aa5.74□□□□□ -1.49
CDKL5-202ENST00000379996 LINC00482Q8N8I6 264 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 C18orf15Q96N68 181 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 MAP1LC3AQ9H492 121 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 SMPXQ9UHP9 88 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 TRAV25A0A0B4J276 109 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 H0Y8G0 127 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 MUC4Q99102 2169 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 IGHV3-66A0A0C4DH42 116 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 C9orf118A6NHY6 69 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 HSD52Q0P140 79 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 ERASQ7Z444 233 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 WFDC9Q8NEX5 89 aa5.73□□□□□ -1.49
CDKL5-202ENST00000379996 NOTCH2Q04721 2471 aa5.72□□□□□ -1.49
CDKL5-202ENST00000379996 MED14OSP0DP75 135 aa5.72□□□□□ -1.49
CDKL5-202ENST00000379996 AMMECR1LQ6DCA0 310 aa5.72□□□□□ -1.49
CDKL5-202ENST00000379996 C7orf71A4D174 169 aa5.72□□□□□ -1.49
CDKL5-202ENST00000379996 LEPP41159 167 aa5.72□□□□□ -1.49
CDKL5-202ENST00000379996 LINC00315P59091 139 aa5.72□□□□□ -1.49
CDKL5-202ENST00000379996 KIF25-AS1Q9Y6Z4 181 aa5.72□□□□□ -1.49
CDKL5-202ENST00000379996 TRBV7-9A0A0J9YWB2 115 aa5.71□□□□□ -1.49
CDKL5-202ENST00000379996 ORM1P02763 201 aa5.71□□□□□ -1.49
CDKL5-202ENST00000379996 INSL3P51460 131 aa5.71□□□□□ -1.49
CDKL5-202ENST00000379996 DLX4Q92988 240 aaPredicted RBP5.71□□□□□ -1.49
CDKL5-202ENST00000379996 SLURP1P55000 103 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 PSMG4Q5JS54 123 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 RASL10AQ92737 203 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 MRAP2Q96G30 205 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 CST9LQ9H4G1 147 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 TLN2Q9Y4G6 2542 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 TRAV12-1A0A0B4J245 112 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 TRAV26-2A0A0B4J265 109 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 TM2D2Q9BX73 214 aa5.71□□□□□ -1.5
CDKL5-202ENST00000379996 SONP18583 2426 aaKnown RBP5.7□□□□□ -1.5
CDKL5-202ENST00000379996 OVOL1O14753 267 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 RNASE3P12724 160 aaKnown RBP5.7□□□□□ -1.5
CDKL5-202ENST00000379996 FAM110AQ9BQ89 295 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 CBY1Q9Y3M2 126 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 SYNJ2BPP57105 145 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 NEGR1Q7Z3B1 354 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.7□□□□□ -1.5
CDKL5-202ENST00000379996 KLLNB2CW77 178 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 K7EP34 96 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 DEFB136Q30KP8 78 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 OCIAD2Q56VL3 154 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 MAPKAPK5-AS1Q8N8E1 139 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 RHPN1-AS1Q9BWJ2 59 aa5.7□□□□□ -1.5
CDKL5-202ENST00000379996 A0A087WX48 190 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 M0R381 172 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 ZNF207O43670 478 aaKnown RBP5.69□□□□□ -1.5
CDKL5-202ENST00000379996 ATP5LO75964 103 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 IGKCP01834 107 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 SMIM17P0DL12 118 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 TMEM78Q5T7P6 136 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 IGHV3OR16-13A0A075B7E8 117 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 IGHV3-74A0A0B4J1X5 117 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 IGLV1-51P01701 117 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 FXYD2P54710 66 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 RPL32P62910 135 aaKnown RBP5.69□□□□□ -1.5
CDKL5-202ENST00000379996 LAGE3Q14657 143 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 LINC00477Q96M19 166 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 SMIM2Q9BVW6 85 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
CDKL5-202ENST00000379996 TRBV25-1A0A075B6N4 114 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 IGHV3-49A0A0A0MS15 119 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 K7EMI3 77 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 DEFB114Q30KQ6 69 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 MAST4O15021 2626 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 TRBV7-3A0A075B6L6 115 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 VAMP3Q15836 100 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 DCANP1Q8TF63 244 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms