RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 NACAE9PAV3 2078 aa8.42□□□□□ -1.06
USP6NL-202ENST00000379237 M0R1W7 72 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 DSCR8Q96T75 97 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 LEPROTO15243 131 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 ATP5G1P05496 136 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 PAX8Q06710 450 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 IGFBPL1Q8WX77 278 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 LINC01587Q99440 93 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
USP6NL-202ENST00000379237 NDPQ00604 133 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 H7C423 109 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 RNF152Q8N8N0 203 aa8.41□□□□□ -1.06
USP6NL-202ENST00000379237 BAALC-AS2P0C853 105 aa8.4□□□□□ -1.06
USP6NL-202ENST00000379237 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
USP6NL-202ENST00000379237 C17orf100A8MU93 164 aa8.4□□□□□ -1.06
USP6NL-202ENST00000379237 IMUPQ9GZP8 106 aa8.4□□□□□ -1.06
USP6NL-202ENST00000379237 A0A0J9YXV3 536 aa8.4□□□□□ -1.07
USP6NL-202ENST00000379237 TNFRSF13BO14836 293 aaPredicted RBP8.4□□□□□ -1.07
USP6NL-202ENST00000379237 LHBP01229 141 aa8.4□□□□□ -1.07
USP6NL-202ENST00000379237 IGKV3-20P01619 116 aa8.4□□□□□ -1.07
USP6NL-202ENST00000379237 CRYGBP07316 175 aa8.4□□□□□ -1.07
USP6NL-202ENST00000379237 HOXB4P17483 251 aaPredicted RBP8.4□□□□□ -1.07
USP6NL-202ENST00000379237 COL4A2P08572 1712 aa8.4□□□□□ -1.07
USP6NL-202ENST00000379237 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 IGHV1-69DA0A0B4J2H0 117 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 FAM27E3Q08E93 113 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 ZNF876PQ49A33 203 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 TMEM263Q8WUH6 116 aaKnown RBP8.39□□□□□ -1.07
USP6NL-202ENST00000379237 WNK1Q9H4A3 2382 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 TEX22C9J3V5 150 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 WT1P19544 449 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-202ENST00000379237 FDCSPQ8NFU4 85 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 TRBV30A0A0K0K1B3 111 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 BUB1B-PAK6H3BSN5 160 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 NSUN5P1Q3KNT7 163 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 DAND5Q8N907 189 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
USP6NL-202ENST00000379237 OPRPNQ99935 248 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-202ENST00000379237 MSMPQ1L6U9 139 aa8.38□□□□□ -1.07
USP6NL-202ENST00000379237 C15orf32Q32M92 178 aa8.38□□□□□ -1.07
USP6NL-202ENST00000379237 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
USP6NL-202ENST00000379237 FREM2Q5SZK8 3169 aa8.38□□□□□ -1.07
USP6NL-202ENST00000379237 CD59P13987 128 aa8.38□□□□□ -1.07
USP6NL-202ENST00000379237 ZNF415Q09FC8 603 aa8.38□□□□□ -1.07
USP6NL-202ENST00000379237 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
USP6NL-202ENST00000379237 TNRC18O15417 2968 aaPredicted RBP8.38□□□□□ -1.07
USP6NL-202ENST00000379237 IGLV2-18A0A075B6J9 118 aa8.37□□□□□ -1.07
USP6NL-202ENST00000379237 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
USP6NL-202ENST00000379237 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
USP6NL-202ENST00000379237 SONP18583 2426 aaKnown RBP8.37□□□□□ -1.07
USP6NL-202ENST00000379237 GATA4P43694 442 aa8.37□□□□□ -1.07
USP6NL-202ENST00000379237 TMEM105Q8N8V8 129 aa8.37□□□□□ -1.07
USP6NL-202ENST00000379237 FAM240AA0A1B0GVK7 77 aa8.37□□□□□ -1.07
USP6NL-202ENST00000379237 LY6G6EA0A0G2JKS1 128 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 GNRH2O43555 120 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 U3KQA8 63 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 LY6G5BQ8NDX9 201 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 TMEM243Q9BU79 118 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 DSCAMO60469 2012 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 I3L3M4 83 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 IGLV1-44P01699 117 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 TMEM258P61165 79 aa8.36□□□□□ -1.07
USP6NL-202ENST00000379237 PIEZO1Q92508 2521 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 TMEM178BH3BS89 294 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 ELANEP08246 267 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 CNFNQ9BYD5 112 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 UCNP55089 124 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 CEP192Q8TEP8 1941 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 B9A039 149 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 DAZ2Q13117 558 aaKnown RBP8.35□□□□□ -1.07
USP6NL-202ENST00000379237 DAZ4Q86SG3 579 aaKnown RBP8.35□□□□□ -1.07
USP6NL-202ENST00000379237 DAZ1Q9NQZ3 744 aaKnown RBP8.35□□□□□ -1.07
USP6NL-202ENST00000379237 DAZ3Q9NR90 486 aaKnown RBP8.35□□□□□ -1.07
USP6NL-202ENST00000379237 CELSR3Q9NYQ7 3312 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 TRBV7-7A0A0K0K1E9 115 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 LOXP28300 417 aaPredicted RBP8.35□□□□□ -1.07
USP6NL-202ENST00000379237 C11orf21Q9P2W6 132 aa8.35□□□□□ -1.07
USP6NL-202ENST00000379237 HOXD3P31249 432 aaPredicted RBP8.34□□□□□ -1.07
USP6NL-202ENST00000379237 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
USP6NL-202ENST00000379237 SPENQ96T58 3664 aaKnown RBP8.34□□□□□ -1.07
USP6NL-202ENST00000379237 C8orf31Q8N9H6 132 aa8.34□□□□□ -1.07
USP6NL-202ENST00000379237 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.07
USP6NL-202ENST00000379237 LINC00477Q96M19 166 aa8.34□□□□□ -1.07
USP6NL-202ENST00000379237 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 RBMY1BA6NDE4 496 aaKnown RBP8.33□□□□□ -1.08
USP6NL-202ENST00000379237 RBMY1EA6NEQ0 496 aaKnown RBP8.33□□□□□ -1.08
USP6NL-202ENST00000379237 RBMY1DP0C7P1 496 aaKnown RBP8.33□□□□□ -1.08
USP6NL-202ENST00000379237 RBMY1A1P0DJD3 496 aaKnown RBP8.33□□□□□ -1.08
USP6NL-202ENST00000379237 RBMY1CP0DJD4 496 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 RBMY1FQ15415 496 aaKnown RBP8.33□□□□□ -1.08
USP6NL-202ENST00000379237 MDS2Q8NDY4 140 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 PRSS33Q8NF86 280 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 DYNLRB2Q8TF09 96 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms