RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 OR11H2Q8NH07 326 aa14.53□□□□□ -0.08
SHROOM1-202ENST00000378676 IGHV4OR15-8A0A075B7B6 117 aa14.53□□□□□ -0.08
SHROOM1-202ENST00000378676 A0A087WW49 117 aa14.53□□□□□ -0.08
SHROOM1-202ENST00000378676 GATA3P23771 443 aa14.53□□□□□ -0.08
SHROOM1-202ENST00000378676 TRBV7-3A0A075B6L6 115 aa14.52□□□□□ -0.08
SHROOM1-202ENST00000378676 A0A096LNT2 108 aa14.52□□□□□ -0.08
SHROOM1-202ENST00000378676 TSHBP01222 138 aa14.52□□□□□ -0.08
SHROOM1-202ENST00000378676 TAL2Q16559 108 aa14.52□□□□□ -0.08
SHROOM1-202ENST00000378676 CD300EQ496F6 205 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-202ENST00000378676 A0A0J9YX75 114 aa14.52□□□□□ -0.09
SHROOM1-202ENST00000378676 MYMXA0A1B0GTQ4 84 aa14.52□□□□□ -0.09
SHROOM1-202ENST00000378676 CRYGDP07320 174 aa14.52□□□□□ -0.09
SHROOM1-202ENST00000378676 POLR2KP53803 58 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-202ENST00000378676 TP53TG1Q9Y2A0 90 aa14.52□□□□□ -0.09
SHROOM1-202ENST00000378676 J3QR89 54 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 LINC01356Q8N9X3 169 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 HIST1H4GQ99525 98 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 GTSF1LQ9H1H1 148 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 IGHV3-16A0A0C4DH30 117 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 K7EQG2 157 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 RPL32P62910 135 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 ZFP2Q6ZN57 461 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 FOXI2Q6ZQN5 318 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 C9orf85Q96MD7 179 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 PRADC1Q9BSG0 188 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 MDFICQ9P1T7 246 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 CYSLTR1Q9Y271 337 aa14.51□□□□□ -0.09
SHROOM1-202ENST00000378676 UBR5O95071 2799 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-202ENST00000378676 SORL1Q92673 2214 aa14.5□□□□□ -0.09
SHROOM1-202ENST00000378676 LGALS1P09382 135 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-202ENST00000378676 RPL39P62891 51 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-202ENST00000378676 FBN2P35556 2912 aa14.5□□□□□ -0.09
SHROOM1-202ENST00000378676 USP9YO00507 2555 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-202ENST00000378676 POLQO75417 2590 aa14.5□□□□□ -0.09
SHROOM1-202ENST00000378676 E9PLD3 99 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 F5H697 171 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 SYNJ2BPP57105 145 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 DSCR9P59020 149 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 FAM74A4Q5TZK3 123 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 DUX5Q96PT3 197 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 CR1P17927 2039 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 GAGE12HA6NDE8 117 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 SMAGPQ0VAQ4 97 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 C12orf74Q32Q52 190 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 ODF3Q96PU9 254 aa14.49□□□□□ -0.09
SHROOM1-202ENST00000378676 IGLV4-69A0A075B6H9 119 aa14.48□□□□□ -0.09
SHROOM1-202ENST00000378676 IGLL5B9A064 214 aa14.48□□□□□ -0.09
SHROOM1-202ENST00000378676 EMP1P54849 157 aa14.48□□□□□ -0.09
SHROOM1-202ENST00000378676 SPINK13Q1W4C9 94 aa14.48□□□□□ -0.09
SHROOM1-202ENST00000378676 SPATA25Q9BR10 227 aa14.48□□□□□ -0.09
SHROOM1-202ENST00000378676 IGIPA6NJ69 53 aa14.48□□□□□ -0.09
SHROOM1-202ENST00000378676 TMEM89A2RUT3 159 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 SDHAF1A6NFY7 115 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 C11orf86A6NJI1 115 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 F8W1H4 67 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 LINC01619G3V211 115 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 LGALS9O00182 355 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 MORN3Q6PF18 240 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 Q8N1Y9 231 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 TSSC4Q9Y5U2 329 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 TGFAP01135 160 aa14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 SNRPD3P62318 126 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-202ENST00000378676 PLEKHB2Q96CS7 222 aa14.46□□□□□ -0.09
SHROOM1-202ENST00000378676 SPANXB1Q9NS25 103 aaPredicted RBP14.46□□□□□ -0.09
SHROOM1-202ENST00000378676 COX6B1P14854 86 aa14.46□□□□□ -0.1
SHROOM1-202ENST00000378676 MXRA5Q9NR99 2828 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 VCYO14598 125 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 FAM208BQ5VWN6 2430 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 ZNF815PA8K554 130 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 ZNF56Q15929 161 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 ZNF479Q96JC4 524 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 CLUHP3Q96NS8 147 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 KIR2DL4Q99706 377 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 LRRK2Q5S007 2527 aa14.45□□□□□ -0.1
SHROOM1-202ENST00000378676 IGHV1OR15-1A0A075B7D0 117 aa14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 ZNF702PQ9H963 129 aa14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 VPREB3Q9UKI3 123 aa14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 TRBV6-5A0A0K0K1A5 114 aa14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 TRBV27A0A0K0K1C4 114 aa14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 HOXD3P31249 432 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 ZNF256Q9Y2P7 627 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 CENPEQ02224 2701 aa14.44□□□□□ -0.1
SHROOM1-202ENST00000378676 PMVKQ15126 192 aa14.43□□□□□ -0.1
SHROOM1-202ENST00000378676 KLHL30-AS1Q8NEE0 82 aa14.43□□□□□ -0.1
SHROOM1-202ENST00000378676 J3QLI3 93 aa14.42□□□□□ -0.1
SHROOM1-202ENST00000378676 M0QY20 66 aa14.42□□□□□ -0.1
SHROOM1-202ENST00000378676 TCTEX1D4Q5JR98 221 aa14.42□□□□□ -0.1
SHROOM1-202ENST00000378676 A0A1B0GWB2 263 aa14.42□□□□□ -0.1
SHROOM1-202ENST00000378676 AMTNQ6UX39 209 aa14.42□□□□□ -0.1
SHROOM1-202ENST00000378676 SYT8Q8NBV8 401 aa14.42□□□□□ -0.1
SHROOM1-202ENST00000378676 TIMM17AQ99595 171 aa14.41□□□□□ -0.1
SHROOM1-202ENST00000378676 FSHBP01225 129 aa14.41□□□□□ -0.1
SHROOM1-202ENST00000378676 TMEM141Q96I45 108 aa14.41□□□□□ -0.1
SHROOM1-202ENST00000378676 RBMY1A1P0DJD3 496 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-202ENST00000378676 RBMY1CP0DJD4 496 aa14.4□□□□□ -0.1
SHROOM1-202ENST00000378676 SCGB2A2Q13296 93 aa14.4□□□□□ -0.1
SHROOM1-202ENST00000378676 RBMY1FQ15415 496 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-202ENST00000378676 RRN3P1Q2M238 152 aa14.4□□□□□ -0.1
SHROOM1-202ENST00000378676 C18orf65Q6ZTR6 163 aa14.4□□□□□ -0.1
SHROOM1-202ENST00000378676 KMT2BQ9UMN6 2715 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms