RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 NXPH4O95158 308 aa13.66□□□□□ -0.22
PCCA-202ENST00000376285 MGPP08493 103 aa13.66□□□□□ -0.22
PCCA-202ENST00000376285 RPL24P83731 157 aaKnown RBP13.66□□□□□ -0.22
PCCA-202ENST00000376285 SONP18583 2426 aaKnown RBP13.65□□□□□ -0.22
PCCA-202ENST00000376285 PSMG4Q5JS54 123 aa13.65□□□□□ -0.22
PCCA-202ENST00000376285 FAM159AQ6UWV7 190 aa13.65□□□□□ -0.22
PCCA-202ENST00000376285 MRPL35Q9NZE8 188 aaKnown RBP13.65□□□□□ -0.22
PCCA-202ENST00000376285 SMIM13P0DJ93 91 aa13.65□□□□□ -0.22
PCCA-202ENST00000376285 SYNJ2BPP57105 145 aa13.65□□□□□ -0.22
PCCA-202ENST00000376285 TMEM86BQ8N661 226 aa13.65□□□□□ -0.22
PCCA-202ENST00000376285 ITPR2Q14571 2701 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 AKAP9Q99996 3911 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 FXYD2P54710 66 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 KRTAP1-1Q07627 177 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 AGRNO00468 2067 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 K7ERJ3 54 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 LINC00315P59091 139 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 ORMDL2Q53FV1 153 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 ZC2HC1BQ5TFG8 222 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 KIF25-AS1Q9Y6Z4 181 aa13.64□□□□□ -0.23
PCCA-202ENST00000376285 LGALS9O00182 355 aa13.63□□□□□ -0.23
PCCA-202ENST00000376285 HOXD3P31249 432 aaPredicted RBP13.63□□□□□ -0.23
PCCA-202ENST00000376285 GTSCR1Q86UQ5 136 aa13.63□□□□□ -0.23
PCCA-202ENST00000376285 POM121L12Q8N7R1 296 aa13.63□□□□□ -0.23
PCCA-202ENST00000376285 TMEM160Q9NX00 188 aa13.63□□□□□ -0.23
PCCA-202ENST00000376285 SORL1Q92673 2214 aa13.63□□□□□ -0.23
PCCA-202ENST00000376285 A0A087WX48 190 aa13.63□□□□□ -0.23
PCCA-202ENST00000376285 K7EQG2 157 aa13.63□□□□□ -0.23
PCCA-202ENST00000376285 A0A0J9YX75 114 aa13.62□□□□□ -0.23
PCCA-202ENST00000376285 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.62□□□□□ -0.23
PCCA-202ENST00000376285 SNRPD3P62318 126 aaKnown RBP13.62□□□□□ -0.23
PCCA-202ENST00000376285 TEX48A0A1B0GUV7 120 aa13.62□□□□□ -0.23
PCCA-202ENST00000376285 CD7P09564 240 aa13.62□□□□□ -0.23
PCCA-202ENST00000376285 C18orf65Q6ZTR6 163 aa13.62□□□□□ -0.23
PCCA-202ENST00000376285 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
PCCA-202ENST00000376285 JPT2Q9H910 190 aa13.62□□□□□ -0.23
PCCA-202ENST00000376285 K7EMI3 77 aa13.61□□□□□ -0.23
PCCA-202ENST00000376285 ODF3Q96PU9 254 aa13.61□□□□□ -0.23
PCCA-202ENST00000376285 MYO9AB2RTY4 2548 aa13.61□□□□□ -0.23
PCCA-202ENST00000376285 CUBNO60494 3623 aa13.61□□□□□ -0.23
PCCA-202ENST00000376285 DNAJC9-AS1A6NH13 148 aa13.61□□□□□ -0.23
PCCA-202ENST00000376285 IGKV3-20P01619 116 aa13.61□□□□□ -0.23
PCCA-202ENST00000376285 TRAV12-2A0A075B6T6 113 aa13.6□□□□□ -0.23
PCCA-202ENST00000376285 CHAC1Q9BUX1 264 aa13.6□□□□□ -0.23
PCCA-202ENST00000376285 DEFB136Q30KP8 78 aa13.59□□□□□ -0.23
PCCA-202ENST00000376285 PPP1R17O96001 155 aa13.59□□□□□ -0.23
PCCA-202ENST00000376285 Q6ZSV7 163 aa13.59□□□□□ -0.23
PCCA-202ENST00000376285 SCGB3A1Q96QR1 104 aa13.59□□□□□ -0.23
PCCA-202ENST00000376285 TRAV12-1A0A0B4J245 112 aa13.58□□□□□ -0.23
PCCA-202ENST00000376285 TCTEX1D4Q5JR98 221 aa13.58□□□□□ -0.23
PCCA-202ENST00000376285 NHP2Q9NX24 153 aaKnown RBP13.58□□□□□ -0.23
PCCA-202ENST00000376285 UNC79Q9P2D8 2635 aa13.58□□□□□ -0.23
PCCA-202ENST00000376285 C2orf66Q6UXQ4 117 aa13.58□□□□□ -0.24
PCCA-202ENST00000376285 ESM1Q9NQ30 184 aa13.58□□□□□ -0.24
PCCA-202ENST00000376285 PLNP26678 52 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 SLURP1P55000 103 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 HIGD1BQ9P298 99 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 TRBV25-1A0A075B6N4 114 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 A0A087WWL8 130 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 IGHV3-16A0A0C4DH30 117 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 F8VRH5 84 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 GTSF1LQ9H1H1 148 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 ACANP16112 2415 aa13.57□□□□□ -0.24
PCCA-202ENST00000376285 H7C1H1 209 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 CIDEAO60543 219 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 SPINK13Q1W4C9 94 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 C9orf85Q96MD7 179 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 YAE1D1Q9NRH1 226 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 MDFICQ9P1T7 246 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 HLA-DRB4P13762 266 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 C4orf3Q8WVX3 66 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 HLA-DRB4X5D2U9 266 aa13.56□□□□□ -0.24
PCCA-202ENST00000376285 ANK3Q12955 4377 aaKnown RBP13.56□□□□□ -0.24
PCCA-202ENST00000376285 GCN1Q92616 2671 aaKnown RBP13.55□□□□□ -0.24
PCCA-202ENST00000376285 Q8N1Y9 231 aa13.55□□□□□ -0.24
PCCA-202ENST00000376285 OR11H1Q8NG94 326 aa13.55□□□□□ -0.24
PCCA-202ENST00000376285 CHTOPQ9Y3Y2 248 aaKnown RBP13.55□□□□□ -0.24
PCCA-202ENST00000376285 LINC01619G3V211 115 aa13.54□□□□□ -0.24
PCCA-202ENST00000376285 AZU1P20160 251 aa13.54□□□□□ -0.24
PCCA-202ENST00000376285 PHLDA1Q8WV24 401 aaPredicted RBP13.54□□□□□ -0.24
PCCA-202ENST00000376285 BAALCQ8WXS3 180 aa13.54□□□□□ -0.24
PCCA-202ENST00000376285 POLR2KP53803 58 aaKnown RBP13.54□□□□□ -0.24
PCCA-202ENST00000376285 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
PCCA-202ENST00000376285 KHDC1LQ5JSQ8 128 aa13.54□□□□□ -0.24
PCCA-202ENST00000376285 MAPKAPK5-AS1Q8N8E1 139 aa13.54□□□□□ -0.24
PCCA-202ENST00000376285 SMAGPQ0VAQ4 97 aa13.53□□□□□ -0.24
PCCA-202ENST00000376285 CEND1Q8N111 149 aa13.53□□□□□ -0.24
PCCA-202ENST00000376285 IGHV1OR15-1A0A075B7D0 117 aa13.53□□□□□ -0.24
PCCA-202ENST00000376285 HIST2H2BDQ6DRA6 164 aa13.53□□□□□ -0.24
PCCA-202ENST00000376285 AMTNQ6UX39 209 aa13.53□□□□□ -0.24
PCCA-202ENST00000376285 FOXI2Q6ZQN5 318 aa13.53□□□□□ -0.24
PCCA-202ENST00000376285 DUX3Q96PT4 197 aa13.53□□□□□ -0.24
PCCA-202ENST00000376285 F5H697 171 aa13.52□□□□□ -0.24
PCCA-202ENST00000376285 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.24
PCCA-202ENST00000376285 WFDC2Q14508 124 aa13.52□□□□□ -0.24
PCCA-202ENST00000376285 NF1P21359 2839 aa13.52□□□□□ -0.25
PCCA-202ENST00000376285 FAM74A4Q5TZK3 123 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms