RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
PRPF4-202ENST00000374199 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 LOC389332A0A1B0GUA5 103 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 CD7P09564 240 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 CMC4P56277 68 aaPredicted RBP9.18□□□□□ -0.94
PRPF4-202ENST00000374199 HIST2H2BDQ6DRA6 164 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 MORN3Q6PF18 240 aaPredicted RBP9.18□□□□□ -0.94
PRPF4-202ENST00000374199 CMYA5Q8N3K9 4069 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 IGLL1P15814 213 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 S100A4P26447 101 aaKnown RBP9.18□□□□□ -0.94
PRPF4-202ENST00000374199 SUMO2P61956 95 aaKnown RBP9.18□□□□□ -0.94
PRPF4-202ENST00000374199 C14orf178Q8N769 122 aaPredicted RBP9.18□□□□□ -0.94
PRPF4-202ENST00000374199 DYNLRB2Q8TF09 96 aa9.18□□□□□ -0.94
PRPF4-202ENST00000374199 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
PRPF4-202ENST00000374199 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
PRPF4-202ENST00000374199 LAGE3Q14657 143 aa9.17□□□□□ -0.94
PRPF4-202ENST00000374199 GIG44P09565 113 aaPredicted RBP9.16□□□□□ -0.94
PRPF4-202ENST00000374199 TOMM6Q96B49 74 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 FASNP49327 2511 aaKnown RBP9.16□□□□□ -0.94
PRPF4-202ENST00000374199 NSD1Q96L73 2696 aaPredicted RBP9.16□□□□□ -0.94
PRPF4-202ENST00000374199 AGRNO00468 2067 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 TRBV27A0A0K0K1C4 114 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 DLEU1O43261 78 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 LINC00482Q8N8I6 264 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 M0QY20 66 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 IFI27L1Q96BM0 104 aa9.16□□□□□ -0.94
PRPF4-202ENST00000374199 SPRY2O43597 315 aa9.15□□□□□ -0.94
PRPF4-202ENST00000374199 RPL39LQ96EH5 51 aaKnown RBP9.15□□□□□ -0.94
PRPF4-202ENST00000374199 UQCR10Q9UDW1 63 aa9.15□□□□□ -0.94
PRPF4-202ENST00000374199 NACAE9PAV3 2078 aa9.15□□□□□ -0.94
PRPF4-202ENST00000374199 CRLF1O75462 422 aa9.15□□□□□ -0.94
PRPF4-202ENST00000374199 SYT8Q8NBV8 401 aa9.15□□□□□ -0.94
PRPF4-202ENST00000374199 DNAH3Q8TD57 4116 aa9.15□□□□□ -0.95
PRPF4-202ENST00000374199 ODF1Q14990 250 aa9.14□□□□□ -0.95
PRPF4-202ENST00000374199 KHDC1LQ5JSQ8 128 aa9.14□□□□□ -0.95
PRPF4-202ENST00000374199 MRPS16Q9Y3D3 137 aaKnown RBP9.14□□□□□ -0.95
PRPF4-202ENST00000374199 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
PRPF4-202ENST00000374199 RIPPLY3P57055 190 aa9.14□□□□□ -0.95
PRPF4-202ENST00000374199 ORMDL2Q53FV1 153 aa9.14□□□□□ -0.95
PRPF4-202ENST00000374199 JPT2Q9H910 190 aa9.14□□□□□ -0.95
PRPF4-202ENST00000374199 TMEM158Q8WZ71 300 aa9.14□□□□□ -0.95
PRPF4-202ENST00000374199 C1orf158Q8N1D5 194 aa9.13□□□□□ -0.95
PRPF4-202ENST00000374199 CSNK1G2-AS1Q8NCQ2 148 aa9.13□□□□□ -0.95
PRPF4-202ENST00000374199 LINC01549A6NIU2 74 aa9.13□□□□□ -0.95
PRPF4-202ENST00000374199 INAFM1C9JVW0 142 aa9.13□□□□□ -0.95
PRPF4-202ENST00000374199 FGF6P10767 208 aa9.13□□□□□ -0.95
PRPF4-202ENST00000374199 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
PRPF4-202ENST00000374199 INSP01308 110 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 IGKV3-20P01619 116 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 A0A1W2PRX2 142 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 M0R2P5 195 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 SMIM17P0DL12 118 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 CITED1Q99966 193 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 SPXQ9BT56 116 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 CCDC168Q8NDH2 2452 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 MYO9AB2RTY4 2548 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 WIPF1O43516 503 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 ATP5LO75964 103 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
PRPF4-202ENST00000374199 SETXQ7Z333 2677 aaKnown RBP9.12□□□□□ -0.95
PRPF4-202ENST00000374199 RNASE8Q8TDE3 154 aaKnown RBP9.11□□□□□ -0.95
PRPF4-202ENST00000374199 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
PRPF4-202ENST00000374199 TLN2Q9Y4G6 2542 aa9.11□□□□□ -0.95
PRPF4-202ENST00000374199 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
PRPF4-202ENST00000374199 NSUN5P1Q3KNT7 163 aa9.11□□□□□ -0.95
PRPF4-202ENST00000374199 ZNF415Q09FC8 603 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 C11orf44Q8N8P7 122 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 TIMM8BQ9Y5J9 83 aaPredicted RBP9.1□□□□□ -0.95
PRPF4-202ENST00000374199 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 FXYD7P58549 80 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 ACANP16112 2415 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 hDV102S1A0JD36 115 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 IGIPA6NJ69 53 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 RS1O15537 224 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 ZFP2Q6ZN57 461 aa9.1□□□□□ -0.95
PRPF4-202ENST00000374199 CBY3A6NI87 242 aa9.09□□□□□ -0.95
PRPF4-202ENST00000374199 A8MWV9 139 aa9.09□□□□□ -0.95
PRPF4-202ENST00000374199 COX8AP10176 69 aa9.09□□□□□ -0.95
PRPF4-202ENST00000374199 ZNF876PQ49A33 203 aa9.09□□□□□ -0.95
PRPF4-202ENST00000374199 HIVEP1P15822 2718 aa9.09□□□□□ -0.95
PRPF4-202ENST00000374199 SONP18583 2426 aaKnown RBP9.09□□□□□ -0.95
PRPF4-202ENST00000374199 CFAP126Q5VTH2 177 aa9.09□□□□□ -0.95
PRPF4-202ENST00000374199 CSTL1Q9H114 145 aa9.09□□□□□ -0.95
PRPF4-202ENST00000374199 A0A087WX48 190 aa9.09□□□□□ -0.96
PRPF4-202ENST00000374199 VCYO14598 125 aa9.09□□□□□ -0.96
PRPF4-202ENST00000374199 PCP4P48539 62 aa9.09□□□□□ -0.96
PRPF4-202ENST00000374199 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
PRPF4-202ENST00000374199 A0A087WWL8 130 aa9.08□□□□□ -0.96
PRPF4-202ENST00000374199 TSHBP01222 138 aa9.08□□□□□ -0.96
PRPF4-202ENST00000374199 RHOHQ15669 191 aa9.08□□□□□ -0.96
PRPF4-202ENST00000374199 INSL3P51460 131 aa9.08□□□□□ -0.96
PRPF4-202ENST00000374199 MCRIP2Q9BUT9 160 aaKnown RBP9.08□□□□□ -0.96
PRPF4-202ENST00000374199 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
PRPF4-202ENST00000374199 SAP30O75446 220 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 MGPP08493 103 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 GAGE1Q13065 139 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 STHQ8IWL8 128 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms