RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TRIAP1O43715 76 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 DUX3Q96PT4 197 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 IGHV1-69DA0A0B4J2H0 117 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 IGIPA6NJ69 53 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 IGHV3-23P01764 117 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 POM121L12Q8N7R1 296 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 TRGV11A0A075B6L2 103 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 SMIM9A6NGZ8 99 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 OOSP1A8MZH6 123 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 H3BT86 120 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 NPFFO15130 113 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 DEFB121Q5J5C9 76 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 ZNRF2Q8NHG8 242 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 CCL17Q92583 94 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 DPH3P1Q9H4G8 78 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 BSNQ9UPA5 3926 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 HELZ2Q9BYK8 2649 aaKnown RBP9.78□□□□□ -0.84
PRPF4-201ENST00000374198 IGHV3OR16-8A0A075B7F1 116 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 CD3EP07766 207 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 GNLYP22749 145 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 TP53TG1Q9Y2A0 90 aa9.78□□□□□ -0.84
PRPF4-201ENST00000374198 C17orf100A8MU93 164 aa9.77□□□□□ -0.84
PRPF4-201ENST00000374198 M0R381 172 aa9.77□□□□□ -0.84
PRPF4-201ENST00000374198 IMUPQ9GZP8 106 aa9.77□□□□□ -0.84
PRPF4-201ENST00000374198 ZGRF1Q86YA3 2104 aa9.77□□□□□ -0.85
PRPF4-201ENST00000374198 LRRC75A-AS1Q8N1F1 130 aa9.77□□□□□ -0.85
PRPF4-201ENST00000374198 GCN1Q92616 2671 aaKnown RBP9.76□□□□□ -0.85
PRPF4-201ENST00000374198 CTSGP08311 255 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 HERVK_113P63121 156 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 J3KT08 172 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 MGPP08493 103 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 SEM1Q6ZVN7 128 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 TMEM141Q96I45 108 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 PLCE1Q9P212 2302 aa9.76□□□□□ -0.85
PRPF4-201ENST00000374198 UQCRQO14949 82 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 SPRY2O43597 315 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 ZNF22P17026 224 aaPredicted RBP9.75□□□□□ -0.85
PRPF4-201ENST00000374198 ZNF876PQ49A33 203 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 CEMP1Q6PRD7 247 aaPredicted RBP9.75□□□□□ -0.85
PRPF4-201ENST00000374198 FAM19A5Q7Z5A7 132 aaPredicted RBP9.75□□□□□ -0.85
PRPF4-201ENST00000374198 GPHB5Q86YW7 130 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 PRRC2CQ9Y520 2896 aaKnown RBP9.75□□□□□ -0.85
PRPF4-201ENST00000374198 PPP1R17O96001 155 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 MYO18BQ8IUG5 2567 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 BAHCC1Q9P281 2608 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 LEPROTO15243 131 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 NBR2O15453 112 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 C22orf34Q6ZV56 151 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 LINC00526Q96FQ7 95 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 METTL26Q96S19 204 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 KAAG1Q9UBP8 84 aa9.75□□□□□ -0.85
PRPF4-201ENST00000374198 IGHV3-35A0A0C4DH35 117 aa9.74□□□□□ -0.85
PRPF4-201ENST00000374198 A0A1B0GX51 115 aa9.74□□□□□ -0.85
PRPF4-201ENST00000374198 TMEM223A0PJW6 202 aa9.74□□□□□ -0.85
PRPF4-201ENST00000374198 COX7A1P24310 79 aa9.74□□□□□ -0.85
PRPF4-201ENST00000374198 IGFBPL1Q8WX77 278 aa9.74□□□□□ -0.85
PRPF4-201ENST00000374198 RPL39P62891 51 aaKnown RBP9.74□□□□□ -0.85
PRPF4-201ENST00000374198 TIMM17AQ99595 171 aa9.74□□□□□ -0.85
PRPF4-201ENST00000374198 ICOSQ9Y6W8 199 aa9.74□□□□□ -0.85
PRPF4-201ENST00000374198 BUB3O43684 328 aa9.73□□□□□ -0.85
PRPF4-201ENST00000374198 C9orf47Q6ZRZ4 202 aa9.73□□□□□ -0.85
PRPF4-201ENST00000374198 NUP37Q8NFH4 326 aa9.73□□□□□ -0.85
PRPF4-201ENST00000374198 MBD3L4A6NDZ8 208 aaPredicted RBP9.73□□□□□ -0.85
PRPF4-201ENST00000374198 MBD3L3A6NE82 208 aaPredicted RBP9.73□□□□□ -0.85
PRPF4-201ENST00000374198 MBD3L5A6NJ08 208 aaPredicted RBP9.73□□□□□ -0.85
PRPF4-201ENST00000374198 LY6LH3BQJ8 138 aa9.73□□□□□ -0.85
PRPF4-201ENST00000374198 WIPF1O43516 503 aa9.73□□□□□ -0.85
PRPF4-201ENST00000374198 PRR9Q5T870 116 aa9.73□□□□□ -0.85
PRPF4-201ENST00000374198 MBD3L2Q8NHZ7 208 aaPredicted RBP9.73□□□□□ -0.85
PRPF4-201ENST00000374198 A0A0G2JNJ9 132 aa9.72□□□□□ -0.85
PRPF4-201ENST00000374198 COX6CP09669 75 aa9.72□□□□□ -0.85
PRPF4-201ENST00000374198 UBE2E1P51965 193 aa9.72□□□□□ -0.85
PRPF4-201ENST00000374198 Q9UFV3 132 aa9.72□□□□□ -0.85
PRPF4-201ENST00000374198 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
PRPF4-201ENST00000374198 PHLDA3Q9Y5J5 127 aa9.72□□□□□ -0.85
PRPF4-201ENST00000374198 ADIPOQQ15848 244 aa9.72□□□□□ -0.85
PRPF4-201ENST00000374198 DEFB104AQ8WTQ1 72 aa9.72□□□□□ -0.85
PRPF4-201ENST00000374198 ACYP1P07311 99 aa9.71□□□□□ -0.85
PRPF4-201ENST00000374198 S100A4P26447 101 aaKnown RBP9.71□□□□□ -0.85
PRPF4-201ENST00000374198 IGHV3-66A0A0C4DH42 116 aa9.71□□□□□ -0.86
PRPF4-201ENST00000374198 A0A0J9YX75 114 aa9.71□□□□□ -0.86
PRPF4-201ENST00000374198 NPBQ8NG41 125 aa9.71□□□□□ -0.86
PRPF4-201ENST00000374198 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.86
PRPF4-201ENST00000374198 TRAV25A0A0B4J276 109 aa9.7□□□□□ -0.86
PRPF4-201ENST00000374198 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
PRPF4-201ENST00000374198 LST1O00453 97 aa9.7□□□□□ -0.86
PRPF4-201ENST00000374198 CLEC2BQ92478 149 aa9.7□□□□□ -0.86
PRPF4-201ENST00000374198 LINC00527Q9UJ94 153 aa9.7□□□□□ -0.86
PRPF4-201ENST00000374198 RPS28P62857 69 aaKnown RBP9.7□□□□□ -0.86
PRPF4-201ENST00000374198 UBTD1Q9HAC8 227 aa9.7□□□□□ -0.86
PRPF4-201ENST00000374198 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 A0A0J9YXY3 114 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 ATP5G1P05496 136 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 POLR2KP53803 58 aaKnown RBP9.69□□□□□ -0.86
PRPF4-201ENST00000374198 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
PRPF4-201ENST00000374198 IGF1P05019 195 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms