RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CCL3L1P16619 93 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 DEFB121Q5J5C9 76 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 NRACQ8N912 160 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 FDCSPQ8NFU4 85 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 S4R3C0 116 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 PIEZO2Q9H5I5 2752 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 LAMA1P25391 3075 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 DOPEY2Q9Y3R5 2298 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 NDUFC2O95298 119 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 AVPP01185 164 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 LOXP28300 417 aaPredicted RBP8.13□□□□□ -1.11
TRERF1-203ENST00000372917 C2orf66Q6UXQ4 117 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 UPK3BQ9BT76 320 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 NBEAQ8NFP9 2946 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 TNRC6BQ9UPQ9 1833 aaKnown RBP8.13□□□□□ -1.11
TRERF1-203ENST00000372917 TMEM223A0PJW6 202 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 RUSC1-AS1Q66K80 236 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 C9orf106Q8NAJ2 232 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 DKK4Q9UBT3 224 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 CELSR3Q9NYQ7 3312 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 ORMDL2Q53FV1 153 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 C6orf226Q5I0X4 101 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 Q6ZSV7 163 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 DEFB124Q8NES8 71 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 IGHV3-35A0A0C4DH35 117 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 WT1-ASQ06250 92 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 THAP8Q8NA92 274 aa8.12□□□□□ -1.11
TRERF1-203ENST00000372917 USP17L23D6RBM5 183 aa8.11□□□□□ -1.11
TRERF1-203ENST00000372917 C9orf139Q6ZV77 190 aa8.11□□□□□ -1.11
TRERF1-203ENST00000372917 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
TRERF1-203ENST00000372917 ZFHX2Q9C0A1 2572 aaPredicted RBP8.11□□□□□ -1.11
TRERF1-203ENST00000372917 HIST1H4AP62805 103 aaKnown RBP8.11□□□□□ -1.11
TRERF1-203ENST00000372917 PRO3102Q9H379 93 aa8.11□□□□□ -1.11
TRERF1-203ENST00000372917 TRBV19A0A075B6N1 114 aa8.11□□□□□ -1.11
TRERF1-203ENST00000372917 RPL27AP46776 148 aaKnown RBP8.1□□□□□ -1.11
TRERF1-203ENST00000372917 TIMM21Q9BVV7 248 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 SERP1Q9Y6X1 66 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 LST1O00453 97 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 ZNF80P51504 273 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-203ENST00000372917 DAZ4Q86SG3 579 aaKnown RBP8.1□□□□□ -1.11
TRERF1-203ENST00000372917 LINC01600Q96MT4 127 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
TRERF1-203ENST00000372917 NDUFA4L2Q9NRX3 87 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 IGKV1D-17A0A075B6S4 117 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 HOXB4P17483 251 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-203ENST00000372917 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 SLC50A1Q9BRV3 221 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 KNCNA6PVL3 124 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 TOMM6Q96B49 74 aa8.1□□□□□ -1.11
TRERF1-203ENST00000372917 SPG11Q96JI7 2443 aa8.09□□□□□ -1.11
TRERF1-203ENST00000372917 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
TRERF1-203ENST00000372917 TP53TG1Q9Y2A0 90 aa8.09□□□□□ -1.11
TRERF1-203ENST00000372917 IGHV3OR16-8A0A075B7F1 116 aa8.09□□□□□ -1.11
TRERF1-203ENST00000372917 FAM223BA6NKX1 122 aa8.09□□□□□ -1.11
TRERF1-203ENST00000372917 ADARB2-AS1A8MUL3 147 aa8.09□□□□□ -1.11
TRERF1-203ENST00000372917 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
TRERF1-203ENST00000372917 SS18Q15532 418 aa8.09□□□□□ -1.11
TRERF1-203ENST00000372917 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
TRERF1-203ENST00000372917 SMIM26A0A096LP01 95 aa8.09□□□□□ -1.12
TRERF1-203ENST00000372917 TMEM89A2RUT3 159 aa8.09□□□□□ -1.12
TRERF1-203ENST00000372917 I3L3M4 83 aa8.09□□□□□ -1.12
TRERF1-203ENST00000372917 M0R1W7 72 aa8.09□□□□□ -1.12
TRERF1-203ENST00000372917 TMEM200BQ69YZ2 307 aa8.09□□□□□ -1.12
TRERF1-203ENST00000372917 IGHV1-18A0A0C4DH31 117 aa8.08□□□□□ -1.12
TRERF1-203ENST00000372917 RPL11P62913 178 aaKnown RBP8.08□□□□□ -1.12
TRERF1-203ENST00000372917 PAPPA-AS1Q5QFB9 102 aa8.08□□□□□ -1.12
TRERF1-203ENST00000372917 SRRM5B3KS81 715 aa8.08□□□□□ -1.12
TRERF1-203ENST00000372917 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
TRERF1-203ENST00000372917 DYNAPQ8N1N2 210 aa8.08□□□□□ -1.12
TRERF1-203ENST00000372917 RBMY1BA6NDE4 496 aaKnown RBP8.07□□□□□ -1.12
TRERF1-203ENST00000372917 RBMY1EA6NEQ0 496 aaKnown RBP8.07□□□□□ -1.12
TRERF1-203ENST00000372917 RBMY1DP0C7P1 496 aaKnown RBP8.07□□□□□ -1.12
TRERF1-203ENST00000372917 RBMY1A1P0DJD3 496 aaKnown RBP8.07□□□□□ -1.12
TRERF1-203ENST00000372917 RBMY1CP0DJD4 496 aa8.07□□□□□ -1.12
TRERF1-203ENST00000372917 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
TRERF1-203ENST00000372917 LINC00474Q9P2X8 69 aa8.07□□□□□ -1.12
TRERF1-203ENST00000372917 TIRAPP58753 221 aa8.07□□□□□ -1.12
TRERF1-203ENST00000372917 RBM3P98179 157 aaKnown RBP8.07□□□□□ -1.12
TRERF1-203ENST00000372917 IGFL4Q6B9Z1 124 aa8.07□□□□□ -1.12
TRERF1-203ENST00000372917 CGB1A6NKQ9 187 aa8.07□□□□□ -1.12
TRERF1-203ENST00000372917 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
TRERF1-203ENST00000372917 NDPQ00604 133 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 TMEM30BQ3MIR4 351 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 DNAL4O96015 105 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 GHRHP01286 108 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 PSMB8P28062 276 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 MPLKIPQ8TAP9 179 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 TMEM14CQ9P0S9 112 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 SUMO2P61956 95 aaKnown RBP8.06□□□□□ -1.12
TRERF1-203ENST00000372917 DCANP1Q8TF63 244 aa8.06□□□□□ -1.12
TRERF1-203ENST00000372917 MGPP08493 103 aa8.05□□□□□ -1.12
TRERF1-203ENST00000372917 IGHV3OR16-13A0A075B7E8 117 aa8.05□□□□□ -1.12
TRERF1-203ENST00000372917 IGHV3-74A0A0B4J1X5 117 aa8.05□□□□□ -1.12
TRERF1-203ENST00000372917 FP248Q71RG6 208 aaPredicted RBP8.05□□□□□ -1.12
TRERF1-203ENST00000372917 BAALC-AS2P0C853 105 aa8.05□□□□□ -1.12
TRERF1-203ENST00000372917 GFRALQ6UXV0 394 aa8.05□□□□□ -1.12
TRERF1-203ENST00000372917 TMEM190Q8WZ59 177 aa8.05□□□□□ -1.12
TRERF1-203ENST00000372917 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms