RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 VSIG2Q96IQ7 327 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 DLEU1O43261 78 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 FOXI1Q12951 378 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 B9D2Q9BPU9 175 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 LENEPQ9Y5L5 61 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 CEND1Q8N111 149 aa7.55□□□□□ -1.2
COL4A6-202ENST00000372216 TECTAO75443 2155 aa7.54□□□□□ -1.2
COL4A6-202ENST00000372216 RIF1Q5UIP0 2472 aaKnown RBP7.54□□□□□ -1.2
COL4A6-202ENST00000372216 WI2-2373I1.2A0A1W2PRP0 233 aa7.54□□□□□ -1.2
COL4A6-202ENST00000372216 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
COL4A6-202ENST00000372216 IGLV1-47P01700 117 aa7.54□□□□□ -1.2
COL4A6-202ENST00000372216 UBE2D1P51668 147 aa7.54□□□□□ -1.2
COL4A6-202ENST00000372216 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
COL4A6-202ENST00000372216 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
COL4A6-202ENST00000372216 ZFP2Q6ZN57 461 aa7.53□□□□□ -1.2
COL4A6-202ENST00000372216 LINC00482Q8N8I6 264 aa7.53□□□□□ -1.2
COL4A6-202ENST00000372216 PKIGQ9Y2B9 76 aa7.53□□□□□ -1.2
COL4A6-202ENST00000372216 TNRC6BQ9UPQ9 1833 aaKnown RBP7.53□□□□□ -1.2
COL4A6-202ENST00000372216 TRBV12-3P01733 135 aa7.53□□□□□ -1.2
COL4A6-202ENST00000372216 ZNF106Q9H2Y7 1883 aaKnown RBP7.52□□□□□ -1.2
COL4A6-202ENST00000372216 K7EMT4 169 aa7.52□□□□□ -1.2
COL4A6-202ENST00000372216 NDUFA1O15239 70 aa7.52□□□□□ -1.2
COL4A6-202ENST00000372216 CASC2Q6XLA1 102 aa7.52□□□□□ -1.2
COL4A6-202ENST00000372216 TRAV26-1A0A087WT03 109 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 TNFRSF13BO14836 293 aaPredicted RBP7.52□□□□□ -1.21
COL4A6-202ENST00000372216 PATE2Q6UY27 113 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 NDUFA11Q86Y39 141 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 LMO4P61968 165 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 IL15RAQ13261 267 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 UTF1Q5T230 341 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 PRO1854Q9UHT4 67 aa7.52□□□□□ -1.21
COL4A6-202ENST00000372216 H3BMG7 143 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 GTF3C1Q12789 2109 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 FAM19A5Q7Z5A7 132 aaPredicted RBP7.51□□□□□ -1.21
COL4A6-202ENST00000372216 NPSP0C0P6 89 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 CRYGDP07320 174 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 SH2D6Q7Z4S9 175 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 PRAC2D3DTV9 90 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 IGLV2-14P01704 120 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 LGALS9BQ3B8N2 356 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 PYY3Q5JQD4 70 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 LGALS9CQ6DKI2 356 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 Q6YL49 198 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 Q8N1Y9 231 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 ANKRD29Q8N6D5 301 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 SND1-IT1Q9HBX3 110 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
COL4A6-202ENST00000372216 DYSFO75923 2080 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 PKDREJQ9NTG1 2253 aa7.51□□□□□ -1.21
COL4A6-202ENST00000372216 E7EUB6 86 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 RPL39P62891 51 aaKnown RBP7.5□□□□□ -1.21
COL4A6-202ENST00000372216 ABCA4P78363 2273 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 NREPQ16612 68 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 FAM19A1Q7Z5A9 133 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 ZGRF1Q86YA3 2104 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 IFITM1P13164 125 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 IGKV1D-37A0A075B6S9 117 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 ODF3BA8MYP8 253 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 DOCK10Q96BY6 2186 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 SPAG11BQ08648 103 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 DAZ2Q13117 558 aaKnown RBP7.5□□□□□ -1.21
COL4A6-202ENST00000372216 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
COL4A6-202ENST00000372216 ZNF664Q8N3J9 261 aa7.5□□□□□ -1.21
COL4A6-202ENST00000372216 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
COL4A6-202ENST00000372216 A0A1B0GX51 115 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 F8VRH5 84 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 UNQ9165/PRO28630Q6UXU0 137 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 Q6ZWC4 215 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 P0DMU3 169 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 FAM231AP0DMU4 169 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 FAM231CP0DMU5 169 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 INSL3P51460 131 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 TMEM258P61165 79 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 C22orf34Q6ZV56 151 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 AKAP6Q13023 2319 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 PCNX2A6NKB5 2137 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 NTN5Q8WTR8 489 aaPredicted RBP7.49□□□□□ -1.21
COL4A6-202ENST00000372216 CCL25O15444 150 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
COL4A6-202ENST00000372216 IGLC2P0DOY2 106 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 IGLC3P0DOY3 106 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 IGHV4-30-4P0DP06 118 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 CEMP1Q6PRD7 247 aaPredicted RBP7.48□□□□□ -1.21
COL4A6-202ENST00000372216 LYPD6Q86Y78 171 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 TMEM61Q8N0U2 210 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 DEFB131BA0A096LNP1 70 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 HILS1P60008 231 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 C10orf91Q5T1B1 145 aa7.48□□□□□ -1.21
COL4A6-202ENST00000372216 LY6G6DO95868 133 aa7.47□□□□□ -1.21
COL4A6-202ENST00000372216 MAP6D1Q9H9H5 199 aa7.47□□□□□ -1.21
COL4A6-202ENST00000372216 NACAE9PAV3 2078 aa7.47□□□□□ -1.21
COL4A6-202ENST00000372216 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
COL4A6-202ENST00000372216 LINC00269Q8N2A0 174 aa7.47□□□□□ -1.21
COL4A6-202ENST00000372216 TRBV20-1A0A075B6N2 111 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms