RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 LINC01546A6NGU7 62 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 SYS1-DBNDD2H3BUS1 97 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 TNFRSF6BO95407 300 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 NDUFAF3Q9BU61 184 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 A0A096LNJ9 63 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 H3BMM0 161 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 M0R381 172 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
SCP2-201ENST00000371509 HBDP02042 147 aa12.13□□□□□ -0.47
SCP2-201ENST00000371509 PRB2P02812 416 aaPredicted RBP12.13□□□□□ -0.47
SCP2-201ENST00000371509 Q8N1Y9 231 aa12.13□□□□□ -0.47
SCP2-201ENST00000371509 NRACQ8N912 160 aa12.13□□□□□ -0.47
SCP2-201ENST00000371509 AP1S3Q96PC3 154 aa12.13□□□□□ -0.47
SCP2-201ENST00000371509 DPH3P1Q9H4G8 78 aa12.13□□□□□ -0.47
SCP2-201ENST00000371509 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
SCP2-201ENST00000371509 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
SCP2-201ENST00000371509 SPRY2O43597 315 aa12.12□□□□□ -0.47
SCP2-201ENST00000371509 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
SCP2-201ENST00000371509 GATA1P15976 413 aaPredicted RBP12.12□□□□□ -0.47
SCP2-201ENST00000371509 IGHV3-16A0A0C4DH30 117 aa12.12□□□□□ -0.47
SCP2-201ENST00000371509 SPATA45Q537H7 98 aa12.12□□□□□ -0.47
SCP2-201ENST00000371509 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
SCP2-201ENST00000371509 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
SCP2-201ENST00000371509 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
SCP2-201ENST00000371509 IGHV1OR15-1A0A075B7D0 117 aa12.11□□□□□ -0.47
SCP2-201ENST00000371509 PRSS47A8MTI9 375 aa12.11□□□□□ -0.47
SCP2-201ENST00000371509 PPP1R17O96001 155 aa12.11□□□□□ -0.47
SCP2-201ENST00000371509 CMC4P56277 68 aaPredicted RBP12.11□□□□□ -0.47
SCP2-201ENST00000371509 ZNF705AQ6ZN79 300 aaPredicted RBP12.11□□□□□ -0.47
SCP2-201ENST00000371509 FAM110AQ9BQ89 295 aa12.11□□□□□ -0.47
SCP2-201ENST00000371509 TRAV9-2A0A087WT02 112 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 Q8N8P6 123 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 TRAV26-2A0A0B4J265 109 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 RBMY1A1P0DJD3 496 aaKnown RBP12.1□□□□□ -0.47
SCP2-201ENST00000371509 RBMY1CP0DJD4 496 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 SMIM17P0DL12 118 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 CTAG1AP78358 180 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
SCP2-201ENST00000371509 STHQ8IWL8 128 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 POM121L12Q8N7R1 296 aa12.1□□□□□ -0.47
SCP2-201ENST00000371509 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
SCP2-201ENST00000371509 SYT8Q8NBV8 401 aa12.09□□□□□ -0.47
SCP2-201ENST00000371509 CLUHP3Q96NS8 147 aa12.09□□□□□ -0.47
SCP2-201ENST00000371509 ZMAT5Q9UDW3 170 aaKnown RBP12.09□□□□□ -0.47
SCP2-201ENST00000371509 KIF25-AS1Q9Y6Z4 181 aa12.09□□□□□ -0.47
SCP2-201ENST00000371509 HSBP1L1C9JCN9 74 aa12.08□□□□□ -0.48
SCP2-201ENST00000371509 RPL35AP18077 110 aaKnown RBP12.08□□□□□ -0.48
SCP2-201ENST00000371509 LBHQ53QV2 105 aaPredicted RBP12.08□□□□□ -0.48
SCP2-201ENST00000371509 C14orf178Q8N769 122 aaPredicted RBP12.08□□□□□ -0.48
SCP2-201ENST00000371509 MGAM2Q2M2H8 2515 aa12.08□□□□□ -0.48
SCP2-201ENST00000371509 TRGV11A0A075B6L2 103 aa12.08□□□□□ -0.48
SCP2-201ENST00000371509 FXYD7P58549 80 aa12.08□□□□□ -0.48
SCP2-201ENST00000371509 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
SCP2-201ENST00000371509 MRPL52Q86TS9 123 aaKnown RBP12.08□□□□□ -0.48
SCP2-201ENST00000371509 MDFICQ9P1T7 246 aa12.08□□□□□ -0.48
SCP2-201ENST00000371509 DNAH3Q8TD57 4116 aa12.07□□□□□ -0.48
SCP2-201ENST00000371509 FCER1GP30273 86 aa12.07□□□□□ -0.48
SCP2-201ENST00000371509 LINC00315P59091 139 aa12.07□□□□□ -0.48
SCP2-201ENST00000371509 C20orf78Q9BR46 151 aa12.07□□□□□ -0.48
SCP2-201ENST00000371509 UQCR10Q9UDW1 63 aa12.07□□□□□ -0.48
SCP2-201ENST00000371509 LINC01545Q5VT33 79 aa12.06□□□□□ -0.48
SCP2-201ENST00000371509 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
SCP2-201ENST00000371509 K7EMI3 77 aa12.06□□□□□ -0.48
SCP2-201ENST00000371509 IGHV4-30-4P0DP06 118 aa12.06□□□□□ -0.48
SCP2-201ENST00000371509 ATOH7Q8N100 152 aa12.06□□□□□ -0.48
SCP2-201ENST00000371509 RASL10AQ92737 203 aa12.06□□□□□ -0.48
SCP2-201ENST00000371509 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
SCP2-201ENST00000371509 NOTCH1P46531 2555 aa12.05□□□□□ -0.48
SCP2-201ENST00000371509 MGPP08493 103 aa12.05□□□□□ -0.48
SCP2-201ENST00000371509 LAGE3Q14657 143 aa12.04□□□□□ -0.48
SCP2-201ENST00000371509 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
SCP2-201ENST00000371509 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
SCP2-201ENST00000371509 H0Y8G0 127 aa12.04□□□□□ -0.48
SCP2-201ENST00000371509 SMIM2Q9BVW6 85 aa12.04□□□□□ -0.48
SCP2-201ENST00000371509 IGLC3P0DOY3 106 aa12.03□□□□□ -0.48
SCP2-201ENST00000371509 SUMO2P61956 95 aaKnown RBP12.03□□□□□ -0.48
SCP2-201ENST00000371509 LGALS9BQ3B8N2 356 aa12.03□□□□□ -0.48
SCP2-201ENST00000371509 LGALS9CQ6DKI2 356 aa12.03□□□□□ -0.48
SCP2-201ENST00000371509 LINC00467Q9BRT7 94 aa12.03□□□□□ -0.48
SCP2-201ENST00000371509 JPT2Q9H910 190 aa12.03□□□□□ -0.48
SCP2-201ENST00000371509 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
SCP2-201ENST00000371509 K7EIL1 84 aa12.02□□□□□ -0.48
SCP2-201ENST00000371509 ORMDL2Q53FV1 153 aa12.02□□□□□ -0.48
SCP2-201ENST00000371509 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.48
SCP2-201ENST00000371509 CBY3A6NI87 242 aa12.02□□□□□ -0.49
SCP2-201ENST00000371509 M0R143 59 aa12.02□□□□□ -0.49
SCP2-201ENST00000371509 ATP5LO75964 103 aa12.02□□□□□ -0.49
SCP2-201ENST00000371509 INSP01308 110 aa12.01□□□□□ -0.49
SCP2-201ENST00000371509 MAJINQ3KP22 176 aa12.01□□□□□ -0.49
SCP2-201ENST00000371509 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
SCP2-201ENST00000371509 G0S2P27469 103 aa12□□□□□ -0.49
SCP2-201ENST00000371509 GOLT1BQ9Y3E0 138 aa12□□□□□ -0.49
SCP2-201ENST00000371509 A0A087WWL8 130 aa12□□□□□ -0.49
SCP2-201ENST00000371509 GIG44P09565 113 aaPredicted RBP12□□□□□ -0.49
SCP2-201ENST00000371509 RPL32P62910 135 aaKnown RBP12□□□□□ -0.49
SCP2-201ENST00000371509 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
SCP2-201ENST00000371509 CRYGDP07320 174 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms