RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 FAM19A2Q8N3H0 131 aa12.2□□□□□ -0.46
PHGDH-202ENST00000369409 GOLT1BQ9Y3E0 138 aa12.2□□□□□ -0.46
PHGDH-202ENST00000369409 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
PHGDH-202ENST00000369409 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 MRAP2Q96G30 205 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 COL6A5A8TX70 2615 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 LINC00614P0C842 121 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 FAM74A4Q5TZK3 123 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
PHGDH-202ENST00000369409 LAMTOR2Q9Y2Q5 125 aa12.19□□□□□ -0.46
PHGDH-202ENST00000369409 NACAE9PAV3 2078 aa12.18□□□□□ -0.46
PHGDH-202ENST00000369409 IFI27P40305 119 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-202ENST00000369409 LINC00315P59091 139 aa12.18□□□□□ -0.46
PHGDH-202ENST00000369409 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
PHGDH-202ENST00000369409 NRACQ8N912 160 aa12.18□□□□□ -0.46
PHGDH-202ENST00000369409 MAP1LC3AQ9H492 121 aa12.18□□□□□ -0.46
PHGDH-202ENST00000369409 M0R2P5 195 aa12.17□□□□□ -0.46
PHGDH-202ENST00000369409 FA2HQ7L5A8 372 aa12.17□□□□□ -0.46
PHGDH-202ENST00000369409 CSTL1Q9H114 145 aa12.17□□□□□ -0.46
PHGDH-202ENST00000369409 CMYA5Q8N3K9 4069 aa12.17□□□□□ -0.46
PHGDH-202ENST00000369409 PMCHL1Q16048 86 aa12.17□□□□□ -0.46
PHGDH-202ENST00000369409 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
PHGDH-202ENST00000369409 POM121L12Q8N7R1 296 aa12.16□□□□□ -0.46
PHGDH-202ENST00000369409 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
PHGDH-202ENST00000369409 SPXQ9BT56 116 aa12.16□□□□□ -0.46
PHGDH-202ENST00000369409 AP5S1Q9NUS5 200 aa12.16□□□□□ -0.46
PHGDH-202ENST00000369409 MRPL16Q9NX20 251 aaKnown RBP12.16□□□□□ -0.46
PHGDH-202ENST00000369409 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
PHGDH-202ENST00000369409 CRYGDP07320 174 aa12.15□□□□□ -0.46
PHGDH-202ENST00000369409 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
PHGDH-202ENST00000369409 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
PHGDH-202ENST00000369409 LINC00587B1AMM8 73 aa12.14□□□□□ -0.47
PHGDH-202ENST00000369409 F5H697 171 aa12.14□□□□□ -0.47
PHGDH-202ENST00000369409 ZNF56Q15929 161 aa12.14□□□□□ -0.47
PHGDH-202ENST00000369409 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
PHGDH-202ENST00000369409 ZNF705AQ6ZN79 300 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-202ENST00000369409 Q6ZWC4 215 aa12.14□□□□□ -0.47
PHGDH-202ENST00000369409 RASL10AQ92737 203 aa12.14□□□□□ -0.47
PHGDH-202ENST00000369409 RPL39LQ96EH5 51 aaKnown RBP12.14□□□□□ -0.47
PHGDH-202ENST00000369409 PTH2Q96A98 100 aa12.13□□□□□ -0.47
PHGDH-202ENST00000369409 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
PHGDH-202ENST00000369409 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
PHGDH-202ENST00000369409 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
PHGDH-202ENST00000369409 PKD1L1Q8TDX9 2849 aa12.12□□□□□ -0.47
PHGDH-202ENST00000369409 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
PHGDH-202ENST00000369409 NXT2Q9NPJ8 142 aaKnown RBP12.12□□□□□ -0.47
PHGDH-202ENST00000369409 A8MWV9 139 aa12.11□□□□□ -0.47
PHGDH-202ENST00000369409 ANK2Q01484 3957 aa12.11□□□□□ -0.47
PHGDH-202ENST00000369409 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 IGHV3-73A0A0B4J1V6 119 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 Q8N8P6 123 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 IGLV2-18A0A075B6J9 118 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 KIR2DL5BA0A0G2JN68 375 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 KIR2DL5BA0A0G2JPC4 375 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 APOC4P55056 127 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 SUMO2P61956 95 aaKnown RBP12.1□□□□□ -0.47
PHGDH-202ENST00000369409 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 KIR2DL5AQ8N109 375 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 KIR2DL5BQ8NHK3 375 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 SMIM2Q9BVW6 85 aa12.1□□□□□ -0.47
PHGDH-202ENST00000369409 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
PHGDH-202ENST00000369409 KRTDAPP60985 99 aa12.09□□□□□ -0.47
PHGDH-202ENST00000369409 EGFEM1PQ0D2K5 195 aa12.09□□□□□ -0.47
PHGDH-202ENST00000369409 JOSD1Q15040 202 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-202ENST00000369409 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
PHGDH-202ENST00000369409 NOP10Q9NPE3 64 aaKnown RBP12.09□□□□□ -0.47
PHGDH-202ENST00000369409 A0A096LNJ9 63 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 PPP1R17O96001 155 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 DEFB135Q30KP9 77 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 Q6ZTI0 123 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 C20orf78Q9BR46 151 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 M0QY20 66 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 LEPROTL1O95214 131 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 UFSP1Q6NVU6 142 aa12.08□□□□□ -0.48
PHGDH-202ENST00000369409 LINC01546A6NGU7 62 aa12.07□□□□□ -0.48
PHGDH-202ENST00000369409 G3V4G9 280 aa12.07□□□□□ -0.48
PHGDH-202ENST00000369409 RS1O15537 224 aa12.07□□□□□ -0.48
PHGDH-202ENST00000369409 DAZ2Q13117 558 aaKnown RBP12.07□□□□□ -0.48
PHGDH-202ENST00000369409 LINC00173Q6ZV60 143 aa12.07□□□□□ -0.48
PHGDH-202ENST00000369409 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
PHGDH-202ENST00000369409 RHODO00212 210 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 C3orf79P0CE67 100 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 ST20Q9HBF5 79 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 X6R8D5 127 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 TCAPO15273 167 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 SCGB1D1O95968 90 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 HBDP02042 147 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
PHGDH-202ENST00000369409 NEGR1Q7Z3B1 354 aa12.05□□□□□ -0.48
PHGDH-202ENST00000369409 MDFIQ99750 246 aa12.05□□□□□ -0.48
PHGDH-202ENST00000369409 EMP1P54849 157 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 OR4C5Q8NGB2 326 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 TMEM70Q9BUB7 260 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 H7C1H1 209 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 P0DMU3 169 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms