RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SLX1AQ9BQ83 275 aa14□□□□□ -0.17
SNX27-202ENST00000368841 TDRG1Q3Y452 100 aa14□□□□□ -0.17
SNX27-202ENST00000368841 FAM110AQ9BQ89 295 aa14□□□□□ -0.17
SNX27-202ENST00000368841 MDFICQ9P1T7 246 aa14□□□□□ -0.17
SNX27-202ENST00000368841 SPTA1P02549 2419 aa14□□□□□ -0.17
SNX27-202ENST00000368841 CTSGP08311 255 aa14□□□□□ -0.17
SNX27-202ENST00000368841 NCOR1P1Q9H4R4 102 aa14□□□□□ -0.17
SNX27-202ENST00000368841 SPANXA1Q9NS26 97 aa14□□□□□ -0.17
SNX27-202ENST00000368841 NREPQ16612 68 aa14□□□□□ -0.17
SNX27-202ENST00000368841 TP53TG3Q9ULZ0 132 aa14□□□□□ -0.17
SNX27-202ENST00000368841 E7EUB6 86 aa13.99□□□□□ -0.17
SNX27-202ENST00000368841 WISP2O76076 250 aa13.99□□□□□ -0.17
SNX27-202ENST00000368841 ACYP1P07311 99 aa13.99□□□□□ -0.17
SNX27-202ENST00000368841 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
SNX27-202ENST00000368841 IGLV11-55A0A075B6I3 123 aa13.99□□□□□ -0.17
SNX27-202ENST00000368841 PATE2Q6UY27 113 aa13.99□□□□□ -0.17
SNX27-202ENST00000368841 DENND4CQ5VZ89 1909 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 CACNA1GO43497 2377 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 TMEM258P61165 79 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 C10orf105Q8TEF2 133 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 NDUFB1O75438 58 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 ANKRD39Q53RE8 183 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 DENND4AQ7Z401 1863 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 NDUFA1O15239 70 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 SIRPDQ9H106 197 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 TRAV26-1A0A087WT03 109 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 UNQ9165/PRO28630Q6UXU0 137 aa13.98□□□□□ -0.17
SNX27-202ENST00000368841 TRBV7-3A0A075B6L6 115 aa13.97□□□□□ -0.17
SNX27-202ENST00000368841 LECT2O14960 151 aa13.97□□□□□ -0.17
SNX27-202ENST00000368841 A0A1B0GX51 115 aa13.97□□□□□ -0.17
SNX27-202ENST00000368841 PSMB8P28062 276 aa13.96□□□□□ -0.17
SNX27-202ENST00000368841 IGKV2D-26A0A0A0MRZ7 120 aa13.96□□□□□ -0.17
SNX27-202ENST00000368841 DOPEY2Q9Y3R5 2298 aa13.96□□□□□ -0.17
SNX27-202ENST00000368841 IGLV3-1P01715 115 aa13.96□□□□□ -0.17
SNX27-202ENST00000368841 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
SNX27-202ENST00000368841 SPAG11BQ08648 103 aa13.96□□□□□ -0.18
SNX27-202ENST00000368841 C10orf91Q5T1B1 145 aa13.95□□□□□ -0.18
SNX27-202ENST00000368841 SIVA1O15304 175 aa13.95□□□□□ -0.18
SNX27-202ENST00000368841 LYPD6BQ8NI32 183 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 ABCA4P78363 2273 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 Q8N7P7 452 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 FAM236AA0A1B0GUQ0 79 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 FAM236BA0A1B0GV22 79 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 IGKV1-17P01599 117 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 CHD3Q12873 2000 aaKnown RBP13.94□□□□□ -0.18
SNX27-202ENST00000368841 DNAJC9-AS1A6NH13 148 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 MIR7-3HGQ8N6C7 128 aa13.94□□□□□ -0.18
SNX27-202ENST00000368841 ARHGAP21Q5T5U3 1957 aa13.93□□□□□ -0.18
SNX27-202ENST00000368841 IGKV4-1P06312 121 aa13.93□□□□□ -0.18
SNX27-202ENST00000368841 SMAD5-AS1Q9Y6J3 95 aa13.93□□□□□ -0.18
SNX27-202ENST00000368841 FRMD6-AS1P0C7T7 363 aa13.93□□□□□ -0.18
SNX27-202ENST00000368841 FXYD2P54710 66 aa13.93□□□□□ -0.18
SNX27-202ENST00000368841 NFE4Q86UQ8 179 aa13.93□□□□□ -0.18
SNX27-202ENST00000368841 KLK5Q9Y337 293 aaPredicted RBP13.93□□□□□ -0.18
SNX27-202ENST00000368841 ZNF106Q9H2Y7 1883 aaKnown RBP13.93□□□□□ -0.18
SNX27-202ENST00000368841 SVIPQ8NHG7 77 aa13.93□□□□□ -0.18
SNX27-202ENST00000368841 LGALS9O00182 355 aa13.92□□□□□ -0.18
SNX27-202ENST00000368841 A0A0B4J2C4 111 aa13.91□□□□□ -0.18
SNX27-202ENST00000368841 TEX22C9J3V5 150 aa13.91□□□□□ -0.18
SNX27-202ENST00000368841 MP68P56378 58 aa13.91□□□□□ -0.18
SNX27-202ENST00000368841 WFDC2Q14508 124 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 WI2-2373I1.2A0A1W2PRP0 233 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 WNK2Q9Y3S1 2297 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 A0A0J9YWU9 116 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 SCXQ7RTU7 201 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 DIRC1Q969H9 104 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 TOMM6Q96B49 74 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 SPTBN2O15020 2390 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 POU2AF1Q16633 256 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 PKDREJQ9NTG1 2253 aa13.9□□□□□ -0.18
SNX27-202ENST00000368841 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.89□□□□□ -0.19
SNX27-202ENST00000368841 LINC01548A6NM66 108 aa13.89□□□□□ -0.19
SNX27-202ENST00000368841 Q6ZUT4 128 aa13.89□□□□□ -0.19
SNX27-202ENST00000368841 LINC00269Q8N2A0 174 aa13.89□□□□□ -0.19
SNX27-202ENST00000368841 NOTCH4Q99466 2003 aa13.89□□□□□ -0.19
SNX27-202ENST00000368841 NUP210Q8TEM1 1887 aaPredicted RBP13.89□□□□□ -0.19
SNX27-202ENST00000368841 HIGD2AQ9BW72 106 aa13.89□□□□□ -0.19
SNX27-202ENST00000368841 OBSL1O75147 1896 aa13.88□□□□□ -0.19
SNX27-202ENST00000368841 HRCT1Q6UXD1 115 aa13.88□□□□□ -0.19
SNX27-202ENST00000368841 C11orf45Q8TAV5 145 aa13.88□□□□□ -0.19
SNX27-202ENST00000368841 PLA2G2EQ9NZK7 142 aa13.88□□□□□ -0.19
SNX27-202ENST00000368841 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.88□□□□□ -0.193e-9■■■■■ 34.8
SNX27-202ENST00000368841 GPHB5Q86YW7 130 aa13.87□□□□□ -0.19
SNX27-202ENST00000368841 MAP6D1Q9H9H5 199 aa13.87□□□□□ -0.19
SNX27-202ENST00000368841 M0R2N4 97 aa13.87□□□□□ -0.19
SNX27-202ENST00000368841 C11orf86A6NJI1 115 aa13.86□□□□□ -0.19
SNX27-202ENST00000368841 INAFM1C9JVW0 142 aa13.86□□□□□ -0.19
SNX27-202ENST00000368841 A0A1W2PNU3 283 aaPredicted RBP13.86□□□□□ -0.19
SNX27-202ENST00000368841 ODF3L1Q8IXM7 274 aa13.86□□□□□ -0.19
SNX27-202ENST00000368841 B9D2Q9BPU9 175 aa13.86□□□□□ -0.19
SNX27-202ENST00000368841 C19orf84I3L1E1 186 aa13.86□□□□□ -0.19
SNX27-202ENST00000368841 LINC00482Q8N8I6 264 aa13.86□□□□□ -0.19
SNX27-202ENST00000368841 PTH2Q96A98 100 aa13.85□□□□□ -0.19
SNX27-202ENST00000368841 SLPIP03973 132 aa13.85□□□□□ -0.19
SNX27-202ENST00000368841 RNF152Q8N8N0 203 aa13.84□□□□□ -0.19
SNX27-202ENST00000368841 TMEM263Q8WUH6 116 aaKnown RBP13.84□□□□□ -0.19
SNX27-202ENST00000368841 DCANP1Q8TF63 244 aa13.84□□□□□ -0.19
SNX27-202ENST00000368841 IGLV2-18A0A075B6J9 118 aa13.84□□□□□ -0.19
SNX27-202ENST00000368841 CRYGBP07316 175 aa13.84□□□□□ -0.19
SNX27-202ENST00000368841 LENEPQ9Y5L5 61 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms