RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 Q6YL49 198 aa13.17□□□□□ -0.3
PCGF3-201ENST00000362003 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
PCGF3-201ENST00000362003 IGKV1D-37A0A075B6S9 117 aa13.17□□□□□ -0.3
PCGF3-201ENST00000362003 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
PCGF3-201ENST00000362003 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 H3BMG7 143 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 A0A0J9YXV3 536 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 Q6ZVH6 145 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 BAALCQ8WXS3 180 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 TIRAPP58753 221 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 DEFB135Q30KP9 77 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 ETDBQ3ZM63 59 aa13.16□□□□□ -0.3
PCGF3-201ENST00000362003 EML6Q6ZMW3 1958 aa13.15□□□□□ -0.3
PCGF3-201ENST00000362003 KIR2DL5BA0A0G2JN68 375 aa13.15□□□□□ -0.3
PCGF3-201ENST00000362003 KIR2DL5BA0A0G2JPC4 375 aa13.15□□□□□ -0.3
PCGF3-201ENST00000362003 KIR2DL5AQ8N109 375 aa13.15□□□□□ -0.3
PCGF3-201ENST00000362003 CEP250Q9BV73 2442 aa13.15□□□□□ -0.3
PCGF3-201ENST00000362003 TIMM17AQ99595 171 aa13.15□□□□□ -0.3
PCGF3-201ENST00000362003 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
PCGF3-201ENST00000362003 ETDCA0A1B0GVM5 59 aa13.15□□□□□ -0.31
PCGF3-201ENST00000362003 LINC00173Q6ZV60 143 aa13.14□□□□□ -0.31
PCGF3-201ENST00000362003 TINCRA0A1B0GVN0 87 aa13.14□□□□□ -0.31
PCGF3-201ENST00000362003 C19orf71A6NCJ1 209 aa13.14□□□□□ -0.31
PCGF3-201ENST00000362003 BAALC-AS2P0C853 105 aa13.14□□□□□ -0.31
PCGF3-201ENST00000362003 RPL39P62891 51 aaKnown RBP13.14□□□□□ -0.31
PCGF3-201ENST00000362003 C9orf153Q5TBE3 101 aa13.14□□□□□ -0.31
PCGF3-201ENST00000362003 DIDO1Q9BTC0 2240 aaKnown RBP13.13□□□□□ -0.31
PCGF3-201ENST00000362003 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 DEFB105AQ8NG35 78 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 LGALS9O00182 355 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 IGF1P05019 195 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 MUSTN1Q8IVN3 82 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 C15orf53Q8NAA6 179 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 SND1-IT1Q9HBX3 110 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 NUPR1O60356 82 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 DEFB1P60022 68 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 ODF3Q96PU9 254 aa13.13□□□□□ -0.31
PCGF3-201ENST00000362003 NPSP0C0P6 89 aa13.12□□□□□ -0.31
PCGF3-201ENST00000362003 NDUFA1O15239 70 aa13.12□□□□□ -0.31
PCGF3-201ENST00000362003 USF3Q68DE3 2245 aa13.12□□□□□ -0.31
PCGF3-201ENST00000362003 CXCL5P42830 114 aa13.12□□□□□ -0.31
PCGF3-201ENST00000362003 HIST2H2BCQ6DN03 193 aa13.12□□□□□ -0.31
PCGF3-201ENST00000362003 C11orf86A6NJI1 115 aa13.11□□□□□ -0.31
PCGF3-201ENST00000362003 DOCK11Q5JSL3 2073 aa13.11□□□□□ -0.31
PCGF3-201ENST00000362003 CACNA1BQ00975 2339 aa13.11□□□□□ -0.31
PCGF3-201ENST00000362003 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
PCGF3-201ENST00000362003 EIF4EBP1Q13541 118 aaPredicted RBP13.11□□□□□ -0.31
PCGF3-201ENST00000362003 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
PCGF3-201ENST00000362003 H0YGX0 51 aa13.1□□□□□ -0.31
PCGF3-201ENST00000362003 NTN5Q8WTR8 489 aaPredicted RBP13.1□□□□□ -0.31
PCGF3-201ENST00000362003 TM2D2Q9BX73 214 aa13.1□□□□□ -0.31
PCGF3-201ENST00000362003 CRIP3Q6Q6R5 217 aa13.1□□□□□ -0.31
PCGF3-201ENST00000362003 H3BQ85 93 aa13.1□□□□□ -0.31
PCGF3-201ENST00000362003 ANKRD29Q8N6D5 301 aa13.1□□□□□ -0.31
PCGF3-201ENST00000362003 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 C11orf71Q6IPW1 123 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 Q6ZPA2 131 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 DEFB4AO15263 64 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 CRYGBP07316 175 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 GPR179Q6PRD1 2367 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 LINC01548A6NM66 108 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 BRWD1-AS2P59051 145 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 DEFB125Q8N687 156 aa13.09□□□□□ -0.31
PCGF3-201ENST00000362003 hADV29S1A0JD25 119 aa13.08□□□□□ -0.31
PCGF3-201ENST00000362003 IGLL5B9A064 214 aa13.08□□□□□ -0.31
PCGF3-201ENST00000362003 VSIG2Q96IQ7 327 aa13.08□□□□□ -0.32
PCGF3-201ENST00000362003 C22orf34Q6ZV56 151 aa13.08□□□□□ -0.32
PCGF3-201ENST00000362003 DYSFO75923 2080 aa13.08□□□□□ -0.32
PCGF3-201ENST00000362003 IGHV4-4A0A075B6R2 117 aa13.08□□□□□ -0.32
PCGF3-201ENST00000362003 LY6LH3BQJ8 138 aa13.08□□□□□ -0.32
PCGF3-201ENST00000362003 CDPF1Q6NVV7 123 aa13.08□□□□□ -0.32
PCGF3-201ENST00000362003 C1orf229Q6ZS94 237 aaPredicted RBP13.08□□□□□ -0.32
PCGF3-201ENST00000362003 E9PLD3 99 aa13.07□□□□□ -0.32
PCGF3-201ENST00000362003 HIGD1BQ9P298 99 aa13.07□□□□□ -0.32
PCGF3-201ENST00000362003 PRO0255Q9UI72 69 aa13.07□□□□□ -0.32
PCGF3-201ENST00000362003 TRBV10-1A0A0K0K1A3 114 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 NCR3O14931 201 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 TNRC6AQ8NDV7 1962 aaKnown RBP13.06□□□□□ -0.32
PCGF3-201ENST00000362003 PKDREJQ9NTG1 2253 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 GAGE12HA6NDE8 117 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 GTF3C1Q12789 2109 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 A4D1N5 150 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 ACYP1P07311 99 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 DOCK7Q96N67 2140 aa13.06□□□□□ -0.32
PCGF3-201ENST00000362003 PROP1O75360 226 aa13.05□□□□□ -0.32
PCGF3-201ENST00000362003 EBI3Q14213 229 aa13.05□□□□□ -0.32
PCGF3-201ENST00000362003 FUSP35637 526 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■■□□ 17.7
PCGF3-201ENST00000362003 ZNF843Q8N446 348 aa13.05□□□□□ -0.32
PCGF3-201ENST00000362003 GVINP1Q7Z2Y8 2422 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 C20orf203Q8NBC4 194 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 ALPK3Q96L96 1907 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 TECTAO75443 2155 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 POLEQ07864 2286 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 CEP192Q8TEP8 1941 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 ZNF80P51504 273 aaPredicted RBP13.04□□□□□ -0.32
PCGF3-201ENST00000362003 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 WFDC11Q8NEX6 87 aa13.04□□□□□ -0.32
PCGF3-201ENST00000362003 OPRPNQ99935 248 aaPredicted RBP13.04□□□□□ -0.32
PCGF3-201ENST00000362003 CCL25O15444 150 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms