RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TMEM101Q96IK0 257 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
COL6A1-201ENST00000361866 C11orf68Q9H3H3 251 aaKnown RBP10.69□□□□□ -0.7
COL6A1-201ENST00000361866 POLQO75417 2590 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 NDUFA4O00483 81 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 NDUFA12Q9UI09 145 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 IGHV1-69DA0A0B4J2H0 117 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 IGHV1-69P01742 117 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
COL6A1-201ENST00000361866 A0A0J9YXV3 536 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 A4D1N5 150 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 C11orf86A6NJI1 115 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 PRIMA1Q86XR5 153 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 UNQ9165/PRO28630Q6UXU0 137 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 COPS9Q8WXC6 57 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 OPRPNQ99935 248 aaPredicted RBP10.68□□□□□ -0.7
COL6A1-201ENST00000361866 YAE1D1Q9NRH1 226 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 BAALCQ8WXS3 180 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 TMEM141Q96I45 108 aa10.68□□□□□ -0.7
COL6A1-201ENST00000361866 TRBV6-1A0A0K0K1D8 114 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 TRBV12-3P01733 135 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 STHQ8IWL8 128 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 IGHV1OR15-1A0A075B7D0 117 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 C1QTNF4Q9BXJ3 329 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 COL5A1P20908 1838 aaPredicted RBP10.67□□□□□ -0.7
COL6A1-201ENST00000361866 CRYGBP07316 175 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 LGALS1P09382 135 aaKnown RBP10.67□□□□□ -0.7
COL6A1-201ENST00000361866 LINC00158P58513 81 aa10.67□□□□□ -0.7
COL6A1-201ENST00000361866 XCL2Q9UBD3 114 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 I3L3M4 83 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 CFC1BP0CG36 223 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 CFC1P0CG37 223 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 IFITM1P13164 125 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 ZFP2Q6ZN57 461 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 IGF2-ASQ6U949 168 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 H3BMM0 161 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 SUMO4Q6EEV6 95 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 UBE2WQ96B02 151 aa10.66□□□□□ -0.7
COL6A1-201ENST00000361866 EYSQ5T1H1 3165 aa10.65□□□□□ -0.7
COL6A1-201ENST00000361866 IGHV7-4-1A0A0J9YVY3 117 aa10.65□□□□□ -0.7
COL6A1-201ENST00000361866 FOXI1Q12951 378 aa10.65□□□□□ -0.7
COL6A1-201ENST00000361866 Q6ZQT7 251 aa10.65□□□□□ -0.7
COL6A1-201ENST00000361866 GATD1Q8NB37 220 aa10.65□□□□□ -0.7
COL6A1-201ENST00000361866 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
COL6A1-201ENST00000361866 C9orf153Q5TBE3 101 aa10.65□□□□□ -0.71
COL6A1-201ENST00000361866 Q8NA96 180 aa10.65□□□□□ -0.71
COL6A1-201ENST00000361866 RNF185Q96GF1 192 aa10.65□□□□□ -0.71
COL6A1-201ENST00000361866 CHCHD5Q9BSY4 110 aa10.65□□□□□ -0.71
COL6A1-201ENST00000361866 ZFYVE26Q68DK2 2539 aa10.65□□□□□ -0.71
COL6A1-201ENST00000361866 C3orf56Q8N813 242 aa10.64□□□□□ -0.71
COL6A1-201ENST00000361866 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
COL6A1-201ENST00000361866 SMAD5-AS1Q9Y6J3 95 aa10.64□□□□□ -0.71
COL6A1-201ENST00000361866 MTORP42345 2549 aa10.64□□□□□ -0.71
COL6A1-201ENST00000361866 E9PLD3 99 aa10.64□□□□□ -0.71
COL6A1-201ENST00000361866 AJUBAQ96IF1 538 aa10.63□□□□□ -0.71
COL6A1-201ENST00000361866 B4DSR2 109 aa10.63□□□□□ -0.71
COL6A1-201ENST00000361866 MUSTN1Q8IVN3 82 aa10.63□□□□□ -0.71
COL6A1-201ENST00000361866 DAND5Q8N907 189 aa10.63□□□□□ -0.71
COL6A1-201ENST00000361866 CCDC140Q96MF4 163 aa10.63□□□□□ -0.71
COL6A1-201ENST00000361866 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
COL6A1-201ENST00000361866 TEN1Q86WV5 123 aa10.63□□□□□ -0.71
COL6A1-201ENST00000361866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-201ENST00000361866 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 IGKV2-29A2NJV5 120 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-201ENST00000361866 RS1O15537 224 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 PAX4O43316 350 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 RNF183Q96D59 192 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 PEMTQ9UBM1 199 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 LRRK2Q5S007 2527 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 IGHV4-38-2P0DP08 117 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 C16orf54Q6UWD8 224 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 C11orf21Q9P2W6 132 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 LENEPQ9Y5L5 61 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 DSPP15924 2871 aaKnown RBP10.62□□□□□ -0.71
COL6A1-201ENST00000361866 INSL3P51460 131 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
COL6A1-201ENST00000361866 CFHR3Q02985 330 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 TCTEX1D4Q5JR98 221 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 ANKRD29Q8N6D5 301 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
COL6A1-201ENST00000361866 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
COL6A1-201ENST00000361866 MSMBP08118 114 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 TOMM6Q96B49 74 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 CARD19Q96LW7 228 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 JMJD1CQ15652 2540 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 FRYLO94915 3013 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 MRPL53Q96EL3 112 aaKnown RBP10.61□□□□□ -0.71
COL6A1-201ENST00000361866 TM2D2Q9BX73 214 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 SPANXB1Q9NS25 103 aaPredicted RBP10.61□□□□□ -0.71
COL6A1-201ENST00000361866 HERV-K104P63124 156 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 GAGE2AQ6NT46 116 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 ZNRF2Q8NHG8 242 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 RASL10AQ92737 203 aa10.61□□□□□ -0.71
COL6A1-201ENST00000361866 A0A096LNJ9 63 aa10.6□□□□□ -0.71
COL6A1-201ENST00000361866 MGAQ8IWI9 3026 aa10.6□□□□□ -0.71
COL6A1-201ENST00000361866 MDFICQ9P1T7 246 aa10.6□□□□□ -0.71
COL6A1-201ENST00000361866 TRAV12-1A0A0B4J245 112 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms