RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 C16orf54Q6UWD8 224 aa10.61□□□□□ -0.71
VCP-201ENST00000358901 GDF5OSQ5U4N7 250 aa10.61□□□□□ -0.71
VCP-201ENST00000358901 SUMO4Q6EEV6 95 aa10.61□□□□□ -0.71
VCP-201ENST00000358901 C22orf34Q6ZV56 151 aa10.61□□□□□ -0.71
VCP-201ENST00000358901 RNF114Q9Y508 228 aa10.61□□□□□ -0.71
VCP-201ENST00000358901 J3QLI3 93 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 CTRLP40313 264 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 LOXL1Q08397 574 aaPredicted RBP10.6□□□□□ -0.71
VCP-201ENST00000358901 TNRC6AQ8NDV7 1962 aaKnown RBP10.6□□□□□ -0.71
VCP-201ENST00000358901 LTBP2Q14767 1821 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 A0A1B0GXF2 115 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 U3KQE9 123 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 F5H768 121 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 ZFP2Q6ZN57 461 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 BOD1L2Q8IYS8 172 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 YPEL4Q96NS1 127 aa10.6□□□□□ -0.71
VCP-201ENST00000358901 HERVK_113P63121 156 aa10.59□□□□□ -0.71
VCP-201ENST00000358901 JMJD1CQ15652 2540 aa10.59□□□□□ -0.71
VCP-201ENST00000358901 IGHV4-30-2A0A087WSY4 118 aa10.59□□□□□ -0.71
VCP-201ENST00000358901 RPL39P62891 51 aaKnown RBP10.59□□□□□ -0.71
VCP-201ENST00000358901 WFDC2Q14508 124 aa10.59□□□□□ -0.71
VCP-201ENST00000358901 C5orf56Q8N8D9 126 aa10.59□□□□□ -0.71
VCP-201ENST00000358901 VPREB3Q9UKI3 123 aa10.59□□□□□ -0.71
VCP-201ENST00000358901 HCFC1P51610 2035 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 SOCS3O14543 225 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 EIF4EBP1Q13541 118 aaPredicted RBP10.58□□□□□ -0.72
VCP-201ENST00000358901 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 KIAA1549Q9HCM3 1950 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 A0A096LPF7 62 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 ODF1Q14990 250 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 Q9H8V8 135 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 LINC00574Q9H8X3 128 aa10.58□□□□□ -0.72
VCP-201ENST00000358901 A4D1N5 150 aa10.57□□□□□ -0.72
VCP-201ENST00000358901 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
VCP-201ENST00000358901 ANKRD11Q6UB99 2663 aaPredicted RBP10.57□□□□□ -0.72
VCP-201ENST00000358901 DAD1P61803 113 aa10.57□□□□□ -0.72
VCP-201ENST00000358901 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
VCP-201ENST00000358901 C9orf47Q6ZRZ4 202 aa10.57□□□□□ -0.72
VCP-201ENST00000358901 ZFYVE26Q68DK2 2539 aa10.57□□□□□ -0.72
VCP-201ENST00000358901 ABCA12Q86UK0 2595 aa10.57□□□□□ -0.72
VCP-201ENST00000358901 ZNF80P51504 273 aaPredicted RBP10.56□□□□□ -0.72
VCP-201ENST00000358901 C9orf153Q5TBE3 101 aa10.56□□□□□ -0.72
VCP-201ENST00000358901 NOP10Q9NPE3 64 aaKnown RBP10.56□□□□□ -0.72
VCP-201ENST00000358901 SLURP1P55000 103 aa10.56□□□□□ -0.72
VCP-201ENST00000358901 MBD6Q96DN6 1003 aa10.56□□□□□ -0.72
VCP-201ENST00000358901 TRBV6-1A0A0K0K1D8 114 aa10.55□□□□□ -0.72
VCP-201ENST00000358901 CLPSL2Q6UWE3 100 aa10.55□□□□□ -0.72
VCP-201ENST00000358901 Q8N1Y9 231 aa10.55□□□□□ -0.72
VCP-201ENST00000358901 Q8NA96 180 aa10.55□□□□□ -0.72
VCP-201ENST00000358901 HIGD1BQ9P298 99 aa10.55□□□□□ -0.72
VCP-201ENST00000358901 UNQ9165/PRO28630Q6UXU0 137 aa10.55□□□□□ -0.72
VCP-201ENST00000358901 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
VCP-201ENST00000358901 TP53TG3Q9ULZ0 132 aa10.54□□□□□ -0.72
VCP-201ENST00000358901 ARHGAP32A7KAX9 2087 aa10.54□□□□□ -0.72
VCP-201ENST00000358901 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
VCP-201ENST00000358901 MUSTN1Q8IVN3 82 aa10.54□□□□□ -0.72
VCP-201ENST00000358901 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 IFITM1P13164 125 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 C11orf86A6NJI1 115 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 ZNF561-AS1K7EIQ3 104 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 ANGP03950 147 aaKnown RBP10.53□□□□□ -0.72
VCP-201ENST00000358901 SPANXA1Q9NS26 97 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
VCP-201ENST00000358901 NRGNQ92686 78 aa10.52□□□□□ -0.72
VCP-201ENST00000358901 C5orf38Q86SI9 138 aa10.52□□□□□ -0.73
VCP-201ENST00000358901 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
VCP-201ENST00000358901 E9PLD3 99 aa10.52□□□□□ -0.73
VCP-201ENST00000358901 RS1O15537 224 aa10.52□□□□□ -0.73
VCP-201ENST00000358901 XCL1P47992 114 aa10.52□□□□□ -0.73
VCP-201ENST00000358901 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
VCP-201ENST00000358901 SIRPDQ9H106 197 aa10.52□□□□□ -0.73
VCP-201ENST00000358901 LINC01548A6NM66 108 aa10.51□□□□□ -0.73
VCP-201ENST00000358901 HAMPP81172 84 aa10.51□□□□□ -0.73
VCP-201ENST00000358901 DEFB121Q5J5C9 76 aa10.51□□□□□ -0.73
VCP-201ENST00000358901 DSCAMO60469 2012 aa10.51□□□□□ -0.73
VCP-201ENST00000358901 TINCRA0A1B0GVN0 87 aa10.51□□□□□ -0.73
VCP-201ENST00000358901 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
VCP-201ENST00000358901 CCL24O00175 119 aa10.51□□□□□ -0.73
VCP-201ENST00000358901 Q71RC1 249 aaPredicted RBP10.51□□□□□ -0.73
VCP-201ENST00000358901 TOMM6Q96B49 74 aa10.5□□□□□ -0.73
VCP-201ENST00000358901 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
VCP-201ENST00000358901 PKD1L2Q7Z442 2459 aa10.5□□□□□ -0.73
VCP-201ENST00000358901 DAZAP2Q15038 168 aaPredicted RBP10.5□□□□□ -0.73
VCP-201ENST00000358901 FBXL19-AS1Q494R0 122 aa10.5□□□□□ -0.73
VCP-201ENST00000358901 IGHG2P01859 326 aa10.5□□□□□ -0.73
VCP-201ENST00000358901 IGHV4OR15-8A0A075B7B6 117 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 A0A087WW49 117 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 TEN1Q86WV5 123 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 DAND5Q8N907 189 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 CRYBA4P53673 196 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 MDFICQ9P1T7 246 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 BAALC-AS2P0C853 105 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 CCDC140Q96MF4 163 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 TIMM17AQ99595 171 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 K7EMT4 169 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 CRLF1O75462 422 aa10.49□□□□□ -0.73
VCP-201ENST00000358901 FN1P02751 2386 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms