RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ZNF415Q09FC8 603 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 RHEBQ15382 184 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 PDZD11Q5EBL8 140 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 C10orf91Q5T1B1 145 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 SYT8Q8NBV8 401 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 ISOC2Q96AB3 205 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 PYGO2Q9BRQ0 406 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 NAT8Q9UHE5 227 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 F5H768 121 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 NANOS2P60321 138 aaKnown RBP2.86□□□□□ -1.95
LIG4-201ENST00000356922 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 IL17DQ8TAD2 202 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 C11orf45Q8TAV5 145 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 V9GYV3 84 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 TRGV4A0A0C4DH28 118 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 H3BVH4 76 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 ARMS2P0C7Q2 107 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 BATFQ16520 125 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 CDPF1Q6NVV7 123 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 WDR73Q6P4I2 378 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 OR10AG1Q8NH19 301 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 PACRGQ96M98 296 aaPredicted RBP2.86□□□□□ -1.95
LIG4-201ENST00000356922 SAMD10Q9BYL1 202 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 MRPL16Q9NX20 251 aaKnown RBP2.86□□□□□ -1.95
LIG4-201ENST00000356922 DKK2Q9UBU2 259 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 IGHV3-73A0A0B4J1V6 119 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 MGPP08493 103 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 MIFP14174 115 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 TWIST1Q15672 202 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 C12orf74Q32Q52 190 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 Q6ZSN1 163 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 OR10G8Q8NGN5 311 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 C16orf74Q96GX8 76 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 SNHG12Q9BXW3 62 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 SMDT1Q9H4I9 107 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 TP53TG1Q9Y2A0 90 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 A8MWL6 223 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 ZNF876PQ49A33 203 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 ZFAND6Q6FIF0 208 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 ZNF493Q6ZR52 646 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 Q6ZTC4 211 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 OR4C5Q8NGB2 326 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 URGCP-MRPS24S4R325 110 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 RYR2Q92736 4967 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 SMIM9A6NGZ8 99 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 CAMPP49913 170 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 FAM3BP58499 235 aaPredicted RBP2.85□□□□□ -1.95
LIG4-201ENST00000356922 RPS20P60866 119 aaKnown RBP2.85□□□□□ -1.95
LIG4-201ENST00000356922 TMEM263Q8WUH6 116 aaKnown RBP2.85□□□□□ -1.95
LIG4-201ENST00000356922 SFRP2Q96HF1 295 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 PGLYRP4Q96LB8 373 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 C9orf85Q96MD7 179 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 SCRT2Q9NQ03 307 aa2.85□□□□□ -1.95
LIG4-201ENST00000356922 GAS8-AS1O95177 125 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 IGLC6P0CF74 106 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 KCNIP4Q6PIL6 250 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 FER1L6-AS1Q8NA97 138 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 ZNF479Q96JC4 524 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 C20orf144Q9BQM9 153 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 SSBP4Q9BWG4 385 aaPredicted RBP2.84□□□□□ -1.95
LIG4-201ENST00000356922 C7orf77A4D0Y5 90 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 IGLL5B9A064 214 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 NUDT3O95989 172 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 ZNF56Q15929 161 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 COL5A1-AS1Q5SY13 56 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 LYZL1Q6UWQ5 148 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 LINC00467Q9BRT7 94 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 RPP21Q9H633 154 aaKnown RBP2.84□□□□□ -1.95
LIG4-201ENST00000356922 LY96Q9Y6Y9 160 aa2.84□□□□□ -1.95
LIG4-201ENST00000356922 A0A0J9YY99 117 aa2.84□□□□□ -1.96
LIG4-201ENST00000356922 FAM231DQ6ZW35 169 aa2.84□□□□□ -1.96
LIG4-201ENST00000356922 ZNF664Q8N3J9 261 aa2.84□□□□□ -1.96
LIG4-201ENST00000356922 FRZBQ92765 325 aa2.84□□□□□ -1.96
LIG4-201ENST00000356922 SMIM12Q96EX1 92 aa2.84□□□□□ -1.96
LIG4-201ENST00000356922 ALKBH7Q9BT30 221 aaPredicted RBP2.84□□□□□ -1.96
LIG4-201ENST00000356922 TEX48A0A1B0GUV7 120 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 HIGD1CA8MV81 97 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 NTF3P20783 257 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 LINC00315P59091 139 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 PNRC1Q12796 327 aaPredicted RBP2.83□□□□□ -1.96
LIG4-201ENST00000356922 DAZ2Q13117 558 aaKnown RBP2.83□□□□□ -1.96
LIG4-201ENST00000356922 JOSD1Q15040 202 aaPredicted RBP2.83□□□□□ -1.96
LIG4-201ENST00000356922 IQCJQ1A5X6 159 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 MRPL52Q86TS9 123 aaKnown RBP2.83□□□□□ -1.96
LIG4-201ENST00000356922 UBE2DNLQ8IWF7 75 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 LINC00612Q8N6U2 182 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 NUP35Q8NFH5 326 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 RASL10AQ92737 203 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 IL36BQ9NZH7 164 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 A0A087WWL8 130 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 ATP5G1P05496 136 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 EVI2AP22794 236 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 MRPL54Q6P161 138 aaKnown RBP2.83□□□□□ -1.96
LIG4-201ENST00000356922 FAM210BQ96KR6 192 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 SPXQ9BT56 116 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 KLK5Q9Y337 293 aaPredicted RBP2.83□□□□□ -1.96
LIG4-201ENST00000356922 DEFB131BA0A096LNP1 70 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 K7ERU9 68 aa2.83□□□□□ -1.96
LIG4-201ENST00000356922 M0R2P5 195 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms