RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PRM2P04554 102 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 BEAN1Q3B7T3 259 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 RPL39LQ96EH5 51 aaKnown RBP18.79■□□□□ 0.6
CLK2-201ENST00000355560 C20orf144Q9BQM9 153 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 KIR2DL5BA0A0G2JN68 375 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 KIR2DL5BA0A0G2JPC4 375 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 ZNF876PQ49A33 203 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 ATOH7Q8N100 152 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 KIR2DL5AQ8N109 375 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 LINC01587Q99440 93 aa18.79■□□□□ 0.6
CLK2-201ENST00000355560 FAM74A4Q5TZK3 123 aa18.78■□□□□ 0.6
CLK2-201ENST00000355560 WFDC10AQ9H1F0 79 aa18.78■□□□□ 0.6
CLK2-201ENST00000355560 H0Y8G0 127 aa18.77■□□□□ 0.6
CLK2-201ENST00000355560 FAM110AQ9BQ89 295 aa18.77■□□□□ 0.6
CLK2-201ENST00000355560 SUMO2P61956 95 aaKnown RBP18.77■□□□□ 0.6
CLK2-201ENST00000355560 NUTF2P61970 127 aaKnown RBP18.77■□□□□ 0.6
CLK2-201ENST00000355560 SMIM2Q9BVW6 85 aa18.77■□□□□ 0.6
CLK2-201ENST00000355560 DDTP30046 118 aa18.76■□□□□ 0.59
CLK2-201ENST00000355560 C19orf73Q9NVV2 129 aa18.76■□□□□ 0.59
CLK2-201ENST00000355560 F5H697 171 aa18.75■□□□□ 0.59
CLK2-201ENST00000355560 PET117Q6UWS5 81 aa18.75■□□□□ 0.59
CLK2-201ENST00000355560 C20orf78Q9BR46 151 aa18.75■□□□□ 0.59
CLK2-201ENST00000355560 LINC00467Q9BRT7 94 aa18.75■□□□□ 0.59
CLK2-201ENST00000355560 C20orf202A1L168 122 aa18.74■□□□□ 0.59
CLK2-201ENST00000355560 ZNF415Q09FC8 603 aa18.74■□□□□ 0.59
CLK2-201ENST00000355560 SUMO4Q6EEV6 95 aa18.74■□□□□ 0.59
CLK2-201ENST00000355560 TCAPO15273 167 aa18.74■□□□□ 0.59
CLK2-201ENST00000355560 PPP1R17O96001 155 aa18.74■□□□□ 0.59
CLK2-201ENST00000355560 FCER1GP30273 86 aa18.74■□□□□ 0.59
CLK2-201ENST00000355560 TMEM208Q9BTX3 173 aa18.74■□□□□ 0.59
CLK2-201ENST00000355560 CRYGDP07320 174 aa18.73■□□□□ 0.59
CLK2-201ENST00000355560 CITED1Q99966 193 aa18.73■□□□□ 0.59
CLK2-201ENST00000355560 MCRIP2Q9BUT9 160 aaKnown RBP18.73■□□□□ 0.59
CLK2-201ENST00000355560 TENM1Q9UKZ4 2725 aa18.72■□□□□ 0.59
CLK2-201ENST00000355560 LAGE3Q14657 143 aa18.72■□□□□ 0.59
CLK2-201ENST00000355560 ZNF56Q15929 161 aa18.72■□□□□ 0.59
CLK2-201ENST00000355560 TMEM158Q8WZ71 300 aa18.72■□□□□ 0.59
CLK2-201ENST00000355560 C1orf158Q8N1D5 194 aa18.71■□□□□ 0.59
CLK2-201ENST00000355560 IGHV3OR16-12A0A075B7B8 117 aa18.71■□□□□ 0.59
CLK2-201ENST00000355560 SPATA45Q537H7 98 aa18.71■□□□□ 0.59
CLK2-201ENST00000355560 C11orf72Q8NBR9 251 aa18.71■□□□□ 0.59
CLK2-201ENST00000355560 MAJINQ3KP22 176 aa18.7■□□□□ 0.58
CLK2-201ENST00000355560 ZNF705AQ6ZN79 300 aaPredicted RBP18.7■□□□□ 0.58
CLK2-201ENST00000355560 SPATA3Q8NHX4 192 aa18.7■□□□□ 0.58
CLK2-201ENST00000355560 M0R2P5 195 aa18.7■□□□□ 0.58
CLK2-201ENST00000355560 IFI27L1Q96BM0 104 aa18.7■□□□□ 0.58
CLK2-201ENST00000355560 LINC01545Q5VT33 79 aa18.69■□□□□ 0.58
CLK2-201ENST00000355560 C18orf15Q96N68 181 aa18.69■□□□□ 0.58
CLK2-201ENST00000355560 ATRQ13535 2644 aa18.69■□□□□ 0.58
CLK2-201ENST00000355560 RPL35AP18077 110 aaKnown RBP18.68■□□□□ 0.58
CLK2-201ENST00000355560 PMCHL2Q9BQD1 86 aa18.68■□□□□ 0.58
CLK2-201ENST00000355560 TRAV9-2A0A087WT02 112 aa18.67■□□□□ 0.58
CLK2-201ENST00000355560 CSTL1Q9H114 145 aa18.67■□□□□ 0.58
CLK2-201ENST00000355560 ST20Q9HBF5 79 aa18.67■□□□□ 0.58
CLK2-201ENST00000355560 VWFP04275 2813 aa18.67■□□□□ 0.58
CLK2-201ENST00000355560 TEP1Q99973 2627 aaKnown RBP18.66■□□□□ 0.58
CLK2-201ENST00000355560 INSL3P51460 131 aa18.66■□□□□ 0.58
CLK2-201ENST00000355560 GIG44P09565 113 aaPredicted RBP18.65■□□□□ 0.58
CLK2-201ENST00000355560 AZU1P20160 251 aa18.65■□□□□ 0.58
CLK2-201ENST00000355560 M0QY20 66 aa18.65■□□□□ 0.58
CLK2-201ENST00000355560 NUDT3O95989 172 aa18.65■□□□□ 0.58
CLK2-201ENST00000355560 DEFA6Q01524 100 aa18.65■□□□□ 0.58
CLK2-201ENST00000355560 C9orf66Q5T8R8 295 aa18.65■□□□□ 0.58
CLK2-201ENST00000355560 NOTCH3Q9UM47 2321 aa18.65■□□□□ 0.58
CLK2-201ENST00000355560 BAHCC1Q9P281 2608 aa18.65■□□□□ 0.58
CLK2-201ENST00000355560 ORMDL2Q53FV1 153 aa18.64■□□□□ 0.57
CLK2-201ENST00000355560 PIK3CD-AS1Q5SR53 167 aa18.64■□□□□ 0.57
CLK2-201ENST00000355560 SPXQ9BT56 116 aa18.64■□□□□ 0.57
CLK2-201ENST00000355560 K7EMI3 77 aa18.64■□□□□ 0.57
CLK2-201ENST00000355560 NEGR1Q7Z3B1 354 aa18.64■□□□□ 0.57
CLK2-201ENST00000355560 A8MWV9 139 aa18.63■□□□□ 0.57
CLK2-201ENST00000355560 PTH2Q96A98 100 aa18.63■□□□□ 0.57
CLK2-201ENST00000355560 NDUFAF3Q9BU61 184 aa18.63■□□□□ 0.57
CLK2-201ENST00000355560 RPL32P62910 135 aaKnown RBP18.62■□□□□ 0.57
CLK2-201ENST00000355560 MRPL16Q9NX20 251 aaKnown RBP18.62■□□□□ 0.57
CLK2-201ENST00000355560 IGHV3-73A0A0B4J1V6 119 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 IGLL1P15814 213 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 POLR2KP53803 58 aaKnown RBP18.61■□□□□ 0.57
CLK2-201ENST00000355560 MORN3Q6PF18 240 aaPredicted RBP18.61■□□□□ 0.57
CLK2-201ENST00000355560 GTSCR1Q86UQ5 136 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 TRBV6-5A0A0K0K1A5 114 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 SDHAF1A6NFY7 115 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 LGALS9BQ3B8N2 356 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 LGALS9CQ6DKI2 356 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 RNASE8Q8TDE3 154 aaKnown RBP18.61■□□□□ 0.57
CLK2-201ENST00000355560 MIEN1Q9BRT3 115 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 C1QTNF4Q9BXJ3 329 aa18.61■□□□□ 0.57
CLK2-201ENST00000355560 NACAE9PAV3 2078 aa18.6■□□□□ 0.57
CLK2-201ENST00000355560 hDV102S1A0JD36 115 aa18.6■□□□□ 0.57
CLK2-201ENST00000355560 C14orf144Q96I85 54 aa18.6■□□□□ 0.57
CLK2-201ENST00000355560 GOLT1BQ9Y3E0 138 aa18.6■□□□□ 0.57
CLK2-201ENST00000355560 ATP5LO75964 103 aa18.59■□□□□ 0.57
CLK2-201ENST00000355560 CFAP126Q5VTH2 177 aa18.58■□□□□ 0.57
CLK2-201ENST00000355560 UFSP1Q6NVU6 142 aa18.58■□□□□ 0.57
CLK2-201ENST00000355560 IL17DQ8TAD2 202 aa18.58■□□□□ 0.57
CLK2-201ENST00000355560 TMEM263Q8WUH6 116 aaKnown RBP18.58■□□□□ 0.57
CLK2-201ENST00000355560 VCYO14598 125 aa18.58■□□□□ 0.56
CLK2-201ENST00000355560 IGLC3P0DOY3 106 aa18.58■□□□□ 0.56
CLK2-201ENST00000355560 HSBP1L1C9JCN9 74 aa18.57■□□□□ 0.56
CLK2-201ENST00000355560 KIR2DL4Q99706 377 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms