RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FBN2P35556 2912 aa14.61□□□□□ -0.07
COL13A1-201ENST00000354547 LINC00315P59091 139 aa14.61□□□□□ -0.07
COL13A1-201ENST00000354547 PHLDA1Q8WV24 401 aaPredicted RBP14.61□□□□□ -0.07
COL13A1-201ENST00000354547 MYMXA0A1B0GTQ4 84 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 PSMB8P28062 276 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 APRG1Q8IVJ8 170 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 MTURNQ8N3F0 131 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 KIF25-AS1Q9Y6Z4 181 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 C12orf74Q32Q52 190 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 SCGB1D4Q6XE38 83 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 TEX15Q9BXT5 2789 aa14.6□□□□□ -0.07
COL13A1-201ENST00000354547 OR5A1Q8NGJ0 315 aa14.59□□□□□ -0.07
COL13A1-201ENST00000354547 NAV2Q8IVL1 2488 aa14.59□□□□□ -0.07
COL13A1-201ENST00000354547 MED14OSP0DP75 135 aa14.59□□□□□ -0.07
COL13A1-201ENST00000354547 SLC25A16P16260 332 aa14.59□□□□□ -0.07
COL13A1-201ENST00000354547 AMTNQ6UX39 209 aa14.59□□□□□ -0.07
COL13A1-201ENST00000354547 SDHAF1A6NFY7 115 aa14.58□□□□□ -0.07
COL13A1-201ENST00000354547 ZNF815PA8K554 130 aa14.58□□□□□ -0.07
COL13A1-201ENST00000354547 BRI3O95415 125 aa14.58□□□□□ -0.07
COL13A1-201ENST00000354547 ZNF56Q15929 161 aa14.58□□□□□ -0.07
COL13A1-201ENST00000354547 SFTA2Q6UW10 78 aa14.58□□□□□ -0.08
COL13A1-201ENST00000354547 ZNF479Q96JC4 524 aa14.58□□□□□ -0.08
COL13A1-201ENST00000354547 IGLL5B9A064 214 aa14.58□□□□□ -0.08
COL13A1-201ENST00000354547 K7EMT4 169 aa14.58□□□□□ -0.08
COL13A1-201ENST00000354547 ZFP2Q6ZN57 461 aa14.58□□□□□ -0.08
COL13A1-201ENST00000354547 TSHBP01222 138 aa14.57□□□□□ -0.08
COL13A1-201ENST00000354547 LGALS1P09382 135 aaKnown RBP14.57□□□□□ -0.08
COL13A1-201ENST00000354547 Q8N1Y9 231 aa14.57□□□□□ -0.08
COL13A1-201ENST00000354547 SNRPD3P62318 126 aaKnown RBP14.57□□□□□ -0.08
COL13A1-201ENST00000354547 PLEKHB2Q96CS7 222 aa14.57□□□□□ -0.08
COL13A1-201ENST00000354547 KIR2DL4Q99706 377 aa14.57□□□□□ -0.08
COL13A1-201ENST00000354547 NOTCH3Q9UM47 2321 aa14.57□□□□□ -0.08
COL13A1-201ENST00000354547 C11orf86A6NJI1 115 aa14.56□□□□□ -0.08
COL13A1-201ENST00000354547 CRYGDP07320 174 aa14.56□□□□□ -0.08
COL13A1-201ENST00000354547 HIST2H2BDQ6DRA6 164 aa14.56□□□□□ -0.08
COL13A1-201ENST00000354547 SONP18583 2426 aaKnown RBP14.56□□□□□ -0.08
COL13A1-201ENST00000354547 OPRPNQ99935 248 aaPredicted RBP14.56□□□□□ -0.08
COL13A1-201ENST00000354547 PPP1R17O96001 155 aa14.55□□□□□ -0.08
COL13A1-201ENST00000354547 H3BMG7 143 aa14.55□□□□□ -0.08
COL13A1-201ENST00000354547 PRB1P04280 392 aa14.55□□□□□ -0.08
COL13A1-201ENST00000354547 SRSF9Q13242 221 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL13A1-201ENST00000354547 SETD2Q9BYW2 2564 aaPredicted RBP14.55□□□□□ -0.08
COL13A1-201ENST00000354547 TRBV7-3A0A075B6L6 115 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 IGHV4OR15-8A0A075B7B6 117 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 A0A087WW49 117 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 TRBV7-9A0A0J9YWB2 115 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 A0A0J9YX75 114 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 DEFB136Q30KP8 78 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 TMEM170BQ5T4T1 132 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 VCYO14598 125 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 NXPH4O95158 308 aa14.54□□□□□ -0.08
COL13A1-201ENST00000354547 POLR2KP53803 58 aaKnown RBP14.54□□□□□ -0.08
COL13A1-201ENST00000354547 BEX4Q9NWD9 120 aaPredicted RBP14.54□□□□□ -0.08
COL13A1-201ENST00000354547 IGHV3-73A0A0B4J1V6 119 aa14.53□□□□□ -0.08
COL13A1-201ENST00000354547 IGHV3-16A0A0C4DH30 117 aa14.53□□□□□ -0.08
COL13A1-201ENST00000354547 E9PLD3 99 aa14.53□□□□□ -0.08
COL13A1-201ENST00000354547 PRM2P04554 102 aa14.53□□□□□ -0.08
COL13A1-201ENST00000354547 LINC01356Q8N9X3 169 aa14.53□□□□□ -0.08
COL13A1-201ENST00000354547 TEX48A0A1B0GUV7 120 aa14.52□□□□□ -0.08
COL13A1-201ENST00000354547 G3V4G9 280 aa14.52□□□□□ -0.08
COL13A1-201ENST00000354547 WNK1Q9H4A3 2382 aa14.52□□□□□ -0.09
COL13A1-201ENST00000354547 WFDC2Q14508 124 aa14.52□□□□□ -0.09
COL13A1-201ENST00000354547 TAL2Q16559 108 aa14.52□□□□□ -0.09
COL13A1-201ENST00000354547 HOXD3P31249 432 aaPredicted RBP14.51□□□□□ -0.09
COL13A1-201ENST00000354547 C18orf65Q6ZTR6 163 aa14.51□□□□□ -0.09
COL13A1-201ENST00000354547 IGLV4-69A0A075B6H9 119 aa14.51□□□□□ -0.09
COL13A1-201ENST00000354547 IGIPA6NJ69 53 aa14.51□□□□□ -0.09
COL13A1-201ENST00000354547 K7EQG2 157 aa14.51□□□□□ -0.09
COL13A1-201ENST00000354547 ZNF876PQ49A33 203 aa14.51□□□□□ -0.09
COL13A1-201ENST00000354547 DUX3Q96PT4 197 aa14.51□□□□□ -0.09
COL13A1-201ENST00000354547 EPG5Q9HCE0 2579 aa14.51□□□□□ -0.09
COL13A1-201ENST00000354547 PMVKQ15126 192 aa14.5□□□□□ -0.09
COL13A1-201ENST00000354547 FOXI2Q6ZQN5 318 aa14.5□□□□□ -0.09
COL13A1-201ENST00000354547 IGHV1OR15-1A0A075B7D0 117 aa14.5□□□□□ -0.09
COL13A1-201ENST00000354547 KNCNA6PVL3 124 aa14.5□□□□□ -0.09
COL13A1-201ENST00000354547 POM121L12Q8N7R1 296 aa14.5□□□□□ -0.09
COL13A1-201ENST00000354547 IGHV3-64A0A075B6Q5 118 aa14.49□□□□□ -0.09
COL13A1-201ENST00000354547 APOMO95445 188 aa14.49□□□□□ -0.09
COL13A1-201ENST00000354547 HOXA3O43365 443 aaPredicted RBP14.49□□□□□ -0.09
COL13A1-201ENST00000354547 COTL1Q14019 142 aa14.49□□□□□ -0.09
COL13A1-201ENST00000354547 MORN3Q6PF18 240 aaPredicted RBP14.49□□□□□ -0.09
COL13A1-201ENST00000354547 SYT8Q8NBV8 401 aa14.49□□□□□ -0.09
COL13A1-201ENST00000354547 PGPEP1Q9NXJ5 209 aa14.49□□□□□ -0.09
COL13A1-201ENST00000354547 C9orf85Q96MD7 179 aa14.48□□□□□ -0.09
COL13A1-201ENST00000354547 GATA3P23771 443 aa14.48□□□□□ -0.09
COL13A1-201ENST00000354547 RRN3P1Q2M238 152 aa14.48□□□□□ -0.09
COL13A1-201ENST00000354547 SH2D6Q7Z4S9 175 aa14.48□□□□□ -0.09
COL13A1-201ENST00000354547 ZNRF2Q8NHG8 242 aa14.48□□□□□ -0.09
COL13A1-201ENST00000354547 M0QY20 66 aa14.47□□□□□ -0.09
COL13A1-201ENST00000354547 SLURP1P55000 103 aa14.47□□□□□ -0.09
COL13A1-201ENST00000354547 KHDC1LQ5JSQ8 128 aa14.47□□□□□ -0.09
COL13A1-201ENST00000354547 MRPL16Q9NX20 251 aaKnown RBP14.47□□□□□ -0.09
COL13A1-201ENST00000354547 TCTEX1D4Q5JR98 221 aa14.47□□□□□ -0.09
COL13A1-201ENST00000354547 LGALS9O00182 355 aa14.47□□□□□ -0.09
COL13A1-201ENST00000354547 TSPEAR-AS2P59090 65 aa14.47□□□□□ -0.09
COL13A1-201ENST00000354547 NACAE9PAV3 2078 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 CCDC168Q8NDH2 2452 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 CHD6Q8TD26 2715 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 LINC01549A6NIU2 74 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 P0DMU3 169 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms