RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
CHRNA1-202ENST00000348749 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
CHRNA1-202ENST00000348749 TP53TG1Q9Y2A0 90 aa7.79□□□□□ -1.16
CHRNA1-202ENST00000348749 POLEQ07864 2286 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 PKD1L2Q7Z442 2459 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 M0R2P5 195 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 C15orf32Q32M92 178 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 ZNRF2Q8NHG8 242 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 EEF1AKMT3Q96AZ1 226 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 METTL26Q96S19 204 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 ATRXP46100 2492 aa7.78□□□□□ -1.16
CHRNA1-202ENST00000348749 ZFHX4Q86UP3 3567 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 IGHV4OR15-8A0A075B7B6 117 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 A0A087WW49 117 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 CLPSL1A2RUU4 121 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 SDHAF1A6NFY7 115 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 IGHV4-39P01824 125 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 MGPP08493 103 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 EMP1P54849 157 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 C2orf82Q6UX34 121 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 MUSTN1Q8IVN3 82 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 NRGNQ92686 78 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 IMUPQ9GZP8 106 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 PPDPFQ9H3Y8 114 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 H7C423 109 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 TRIAP1O43715 76 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 Q1RN00 199 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 PRR9Q5T870 116 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 C11orf71Q6IPW1 123 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 C9orf139Q6ZV77 190 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 LINC01560Q8TB33 94 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 CHCHD5Q9BSY4 110 aa7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 MAP1BP46821 2468 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-202ENST00000348749 LOC400499M0QZD8 3231 aa7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 PCNX1Q96RV3 2341 aa7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 TMEM223A0PJW6 202 aa7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 H7C2G1 150 aa7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 POLR2KP53803 58 aaKnown RBP7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 LINC00477Q96M19 166 aa7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 PHLDA3Q9Y5J5 127 aa7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 CNOT1A5YKK6 2376 aaKnown RBP7.76□□□□□ -1.17
CHRNA1-202ENST00000348749 TRAV21A0A0B4J279 112 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 NXPH4O95158 308 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 UBE2E1P51965 193 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 ZNF56Q15929 161 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 TMEM101Q96IK0 257 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 SIRPDQ9H106 197 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 USP24Q9UPU5 2620 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 FAM208BQ5VWN6 2430 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 S100A4P26447 101 aaKnown RBP7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
CHRNA1-202ENST00000348749 IGHV3-35A0A0C4DH35 117 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 VCYO14598 125 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 OVOL1O14753 267 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 IGHV1-69P01742 117 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 ID1P41134 155 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 RPL39P62891 51 aaKnown RBP7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 ZFAND2AQ8N6M9 145 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 ICOSQ9Y6W8 199 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 KIF25-AS1Q9Y6Z4 181 aa7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
CHRNA1-202ENST00000348749 FAM223BA6NKX1 122 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 LINC00315P59091 139 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 FAM223AQ8IWN6 122 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 ITLN2Q8WWU7 325 aaPredicted RBP7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 APC2O95996 2303 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 ATP6V0E1O15342 81 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 ACYP1P07311 99 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 COX6CP09669 75 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 ECSCRQ19T08 205 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 CLEC19AQ6UXS0 136 aa7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 CSDC2Q9Y534 153 aaKnown RBP7.73□□□□□ -1.17
CHRNA1-202ENST00000348749 CFAP47Q6ZTR5 3102 aa7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 IGHV3-66A0A0C4DH42 116 aa7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 SPRY2O43597 315 aa7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 RNASE3P12724 160 aaKnown RBP7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 C5orf47Q569G3 176 aa7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 APRG1Q8IVJ8 170 aa7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 C3orf22Q8N5N4 141 aa7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 C16orf92Q96LL3 132 aa7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 BEX4Q9NWD9 120 aaPredicted RBP7.72□□□□□ -1.17
CHRNA1-202ENST00000348749 A0A0J9YXY3 114 aa7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 TRBV27A0A0K0K1C4 114 aa7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 K7ENP7 123 aa7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 LST1O00453 97 aa7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 IGF1P05019 195 aa7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 ATP5G1P05496 136 aa7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.17
CHRNA1-202ENST00000348749 FAM236AA0A1B0GUQ0 79 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 UQCRQO14949 82 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 NDUFA7O95182 113 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 LINC00694P0DN24 101 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 LRRC75A-AS1Q8N1F1 130 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 DUX3Q96PT4 197 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 LITAFQ99732 161 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms