RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 DKK2Q9UBU2 259 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 TP73-AS1Q9UF72 201 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 ANK3Q12955 4377 aaKnown RBP15.04■□□□□ -0
CHRNA3-202ENST00000348639 NUDT3O95989 172 aa15.03■□□□□ -0
CHRNA3-202ENST00000348639 COX8AP10176 69 aa15.03■□□□□ -0
CHRNA3-202ENST00000348639 ODF1Q14990 250 aa15.03■□□□□ -0
CHRNA3-202ENST00000348639 SETD2Q9BYW2 2564 aaPredicted RBP15.02■□□□□ -0
CHRNA3-202ENST00000348639 CD300EQ496F6 205 aaPredicted RBP15.02■□□□□ -0
CHRNA3-202ENST00000348639 CITED2Q99967 270 aaPredicted RBP15.02■□□□□ -0
CHRNA3-202ENST00000348639 TRGV11A0A075B6L2 103 aa15.02□□□□□ -0.01
CHRNA3-202ENST00000348639 ANKRD39Q53RE8 183 aa15.02□□□□□ -0.01
CHRNA3-202ENST00000348639 SPAG8Q99932 426 aaPredicted RBP15.02□□□□□ -0.01
CHRNA3-202ENST00000348639 ZMAT4Q9H898 229 aa15.02□□□□□ -0.01
CHRNA3-202ENST00000348639 MAP6D1Q9H9H5 199 aa15.02□□□□□ -0.01
CHRNA3-202ENST00000348639 CCL24O00175 119 aa15.01□□□□□ -0.01
CHRNA3-202ENST00000348639 ZNF124Q15973 351 aa15.01□□□□□ -0.01
CHRNA3-202ENST00000348639 ZMAT5Q9UDW3 170 aaKnown RBP15.01□□□□□ -0.01
CHRNA3-202ENST00000348639 A0A087WWL8 130 aa15□□□□□ -0.01
CHRNA3-202ENST00000348639 RBMY1A1P0DJD3 496 aaKnown RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 RBMY1CP0DJD4 496 aa15□□□□□ -0.01
CHRNA3-202ENST00000348639 HINT1P49773 126 aaPredicted RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 RPL32P62910 135 aaKnown RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 RBMY1FQ15415 496 aaKnown RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 SUMO4Q6EEV6 95 aa15□□□□□ -0.01
CHRNA3-202ENST00000348639 STPG4Q8N801 248 aa15□□□□□ -0.01
CHRNA3-202ENST00000348639 NOTCH2Q04721 2471 aa15□□□□□ -0.01
CHRNA3-202ENST00000348639 RBMY1BA6NDE4 496 aaKnown RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 RBMY1EA6NEQ0 496 aaKnown RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 RBMY1DP0C7P1 496 aaKnown RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 HILS1P60008 231 aa15□□□□□ -0.01
CHRNA3-202ENST00000348639 TMEM160Q9NX00 188 aa15□□□□□ -0.01
CHRNA3-202ENST00000348639 ZNF256Q9Y2P7 627 aaPredicted RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 TSSC4Q9Y5U2 329 aaPredicted RBP15□□□□□ -0.01
CHRNA3-202ENST00000348639 TRAV25A0A0B4J276 109 aa14.99□□□□□ -0.01
CHRNA3-202ENST00000348639 CSTL1Q9H114 145 aa14.99□□□□□ -0.01
CHRNA3-202ENST00000348639 HIVEP2P31629 2446 aa14.99□□□□□ -0.01
CHRNA3-202ENST00000348639 WNK1Q9H4A3 2382 aa14.99□□□□□ -0.01
CHRNA3-202ENST00000348639 TOMM6Q96B49 74 aa14.99□□□□□ -0.01
CHRNA3-202ENST00000348639 CBY3A6NI87 242 aa14.98□□□□□ -0.01
CHRNA3-202ENST00000348639 F5H697 171 aa14.97□□□□□ -0.01
CHRNA3-202ENST00000348639 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.97□□□□□ -0.01
CHRNA3-202ENST00000348639 LINC00469Q8N7U9 141 aa14.97□□□□□ -0.01
CHRNA3-202ENST00000348639 LY6G6DO95868 133 aa14.97□□□□□ -0.01
CHRNA3-202ENST00000348639 CRYGDP07320 174 aa14.97□□□□□ -0.01
CHRNA3-202ENST00000348639 FGF6P10767 208 aa14.97□□□□□ -0.01
CHRNA3-202ENST00000348639 IGKCP01834 107 aa14.96□□□□□ -0.01
CHRNA3-202ENST00000348639 POLR2KP53803 58 aaKnown RBP14.96□□□□□ -0.01
CHRNA3-202ENST00000348639 FAM74A4Q5TZK3 123 aa14.96□□□□□ -0.01
CHRNA3-202ENST00000348639 HHLA3Q9XRX5 114 aa14.96□□□□□ -0.01
CHRNA3-202ENST00000348639 ZNF876PQ49A33 203 aa14.95□□□□□ -0.02
CHRNA3-202ENST00000348639 DPM2O94777 84 aa14.95□□□□□ -0.02
CHRNA3-202ENST00000348639 SCGB3A1Q96QR1 104 aa14.95□□□□□ -0.02
CHRNA3-202ENST00000348639 OTOGQ6ZRI0 2925 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 A0A087WX48 190 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 TRBV6-5A0A0K0K1A5 114 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 HTN1P15515 57 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 MPV17L2Q567V2 206 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 C2orf66Q6UXQ4 117 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 BOD1L2Q8IYS8 172 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 CLUHP3Q96NS8 147 aa14.94□□□□□ -0.02
CHRNA3-202ENST00000348639 VCYO14598 125 aa14.93□□□□□ -0.02
CHRNA3-202ENST00000348639 C2orf91Q6ZV80 131 aa14.93□□□□□ -0.02
CHRNA3-202ENST00000348639 FLNBO75369 2602 aaKnown RBP14.93□□□□□ -0.02
CHRNA3-202ENST00000348639 TRAV12-1A0A0B4J245 112 aa14.93□□□□□ -0.02
CHRNA3-202ENST00000348639 ZNF56Q15929 161 aa14.93□□□□□ -0.02
CHRNA3-202ENST00000348639 MRPL35Q9NZE8 188 aaKnown RBP14.93□□□□□ -0.02
CHRNA3-202ENST00000348639 BAHCC1Q9P281 2608 aa14.92□□□□□ -0.02
CHRNA3-202ENST00000348639 M0QY20 66 aa14.92□□□□□ -0.02
CHRNA3-202ENST00000348639 G0S2P27469 103 aa14.92□□□□□ -0.02
CHRNA3-202ENST00000348639 ODF3L2Q3SX64 289 aa14.92□□□□□ -0.02
CHRNA3-202ENST00000348639 C12orf54Q6X4T0 127 aa14.92□□□□□ -0.02
CHRNA3-202ENST00000348639 NEGR1Q7Z3B1 354 aa14.92□□□□□ -0.02
CHRNA3-202ENST00000348639 DLEU1O43261 78 aa14.92□□□□□ -0.02
CHRNA3-202ENST00000348639 TRBV27A0A0K0K1C4 114 aa14.91□□□□□ -0.02
CHRNA3-202ENST00000348639 SDHAF1A6NFY7 115 aa14.91□□□□□ -0.02
CHRNA3-202ENST00000348639 NDUFA7O95182 113 aa14.91□□□□□ -0.02
CHRNA3-202ENST00000348639 TCTAP57738 103 aa14.91□□□□□ -0.02
CHRNA3-202ENST00000348639 KIR2DL4Q99706 377 aa14.91□□□□□ -0.02
CHRNA3-202ENST00000348639 LINC00467Q9BRT7 94 aa14.91□□□□□ -0.02
CHRNA3-202ENST00000348639 LINC01549A6NIU2 74 aa14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 BVES-AS1Q5T3Y7 98 aa14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 ERASQ7Z444 233 aa14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 ZNF25P17030 456 aaPredicted RBP14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 NMUP48645 174 aa14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 NSUN5P1Q3KNT7 163 aa14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 MORN3Q6PF18 240 aaPredicted RBP14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 JMJD8Q96S16 334 aa14.9□□□□□ -0.02
CHRNA3-202ENST00000348639 H7C1H1 209 aa14.89□□□□□ -0.03
CHRNA3-202ENST00000348639 PLNP26678 52 aa14.89□□□□□ -0.03
CHRNA3-202ENST00000348639 ZFP2Q6ZN57 461 aa14.89□□□□□ -0.03
CHRNA3-202ENST00000348639 TRPT1Q86TN4 253 aaKnown RBP14.89□□□□□ -0.03
CHRNA3-202ENST00000348639 NEXN-AS1Q8NBZ9 246 aa14.89□□□□□ -0.03
CHRNA3-202ENST00000348639 SIVA1O15304 175 aa14.88□□□□□ -0.03
CHRNA3-202ENST00000348639 INSP01308 110 aa14.88□□□□□ -0.03
CHRNA3-202ENST00000348639 PIK3CD-AS1Q5SR53 167 aa14.88□□□□□ -0.03
CHRNA3-202ENST00000348639 PCP2Q8IVA1 136 aa14.88□□□□□ -0.03
CHRNA3-202ENST00000348639 CYSLTR1Q9Y271 337 aa14.88□□□□□ -0.03
CHRNA3-202ENST00000348639 NIPBLQ6KC79 2804 aaeCLIP14.88□□□□□ -0.03
CHRNA3-202ENST00000348639 F8VRH5 84 aa14.88□□□□□ -0.03
CHRNA3-202ENST00000348639 ZNF415Q09FC8 603 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms