RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 URB1-AS1Q96HZ7 61 aa13.55□□□□□ -0.24
PTN-201ENST00000348225 ZMAT5Q9UDW3 170 aaKnown RBP13.55□□□□□ -0.24
PTN-201ENST00000348225 NOTCH3Q9UM47 2321 aa13.55□□□□□ -0.24
PTN-201ENST00000348225 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
PTN-201ENST00000348225 JPT2Q9H910 190 aa13.54□□□□□ -0.24
PTN-201ENST00000348225 A0A087WWL8 130 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 LOC389332A0A1B0GUA5 103 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 PPP1R17O96001 155 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 AZU1P20160 251 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 ZNF705AQ6ZN79 300 aaPredicted RBP13.53□□□□□ -0.24
PTN-201ENST00000348225 RNASE8Q8TDE3 154 aaKnown RBP13.53□□□□□ -0.24
PTN-201ENST00000348225 NDUFAF3Q9BU61 184 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 AP5S1Q9NUS5 200 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 GAS8-AS1O95177 125 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 NRACQ8N912 160 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 C16orf74Q96GX8 76 aa13.53□□□□□ -0.24
PTN-201ENST00000348225 KIR2DL5BA0A0G2JN68 375 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 KIR2DL5BA0A0G2JPC4 375 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 A8MWV9 139 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 SMIM6P0DI80 62 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 GATA1P15976 413 aaPredicted RBP13.52□□□□□ -0.25
PTN-201ENST00000348225 IFI27P40305 119 aaPredicted RBP13.52□□□□□ -0.25
PTN-201ENST00000348225 APOC4P55056 127 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 RIPPLY3P57055 190 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 LINC00315P59091 139 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 OXLD1Q5BKU9 147 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 FAM74A4Q5TZK3 123 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 KIR2DL5AQ8N109 375 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 KIR2DL5BQ8NHK3 375 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 IL17DQ8TAD2 202 aa13.52□□□□□ -0.25
PTN-201ENST00000348225 F5H697 171 aa13.51□□□□□ -0.25
PTN-201ENST00000348225 CRYGDP07320 174 aa13.51□□□□□ -0.25
PTN-201ENST00000348225 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
PTN-201ENST00000348225 FAM19A2Q8N3H0 131 aa13.51□□□□□ -0.25
PTN-201ENST00000348225 NXT2Q9NPJ8 142 aaKnown RBP13.51□□□□□ -0.25
PTN-201ENST00000348225 ZNF56Q15929 161 aa13.5□□□□□ -0.25
PTN-201ENST00000348225 STAB1Q9NY15 2570 aa13.5□□□□□ -0.25
PTN-201ENST00000348225 PRSS47A8MTI9 375 aa13.5□□□□□ -0.25
PTN-201ENST00000348225 SUMO4Q6EEV6 95 aa13.5□□□□□ -0.25
PTN-201ENST00000348225 CMYA5Q8N3K9 4069 aa13.49□□□□□ -0.25
PTN-201ENST00000348225 IGHV1-24A0A0C4DH33 117 aa13.49□□□□□ -0.25
PTN-201ENST00000348225 EGFEM1PQ0D2K5 195 aa13.49□□□□□ -0.25
PTN-201ENST00000348225 RASL10AQ92737 203 aa13.49□□□□□ -0.25
PTN-201ENST00000348225 C20orf78Q9BR46 151 aa13.49□□□□□ -0.25
PTN-201ENST00000348225 MRPL16Q9NX20 251 aaKnown RBP13.49□□□□□ -0.25
PTN-201ENST00000348225 LINC00518Q8N0U6 118 aa13.48□□□□□ -0.25
PTN-201ENST00000348225 Q8N8P6 123 aa13.48□□□□□ -0.25
PTN-201ENST00000348225 RHODO00212 210 aa13.47□□□□□ -0.25
PTN-201ENST00000348225 DAZ2Q13117 558 aaKnown RBP13.47□□□□□ -0.25
PTN-201ENST00000348225 TRGV1A0A0A0MS02 117 aa13.46□□□□□ -0.25
PTN-201ENST00000348225 SUMO2P61956 95 aaKnown RBP13.46□□□□□ -0.25
PTN-201ENST00000348225 LGALS9BQ3B8N2 356 aa13.46□□□□□ -0.25
PTN-201ENST00000348225 Q6ZWC4 215 aa13.46□□□□□ -0.25
PTN-201ENST00000348225 RPL39LQ96EH5 51 aaKnown RBP13.46□□□□□ -0.25
PTN-201ENST00000348225 ANK2Q01484 3957 aa13.46□□□□□ -0.25
PTN-201ENST00000348225 LINC01546A6NGU7 62 aa13.46□□□□□ -0.26
PTN-201ENST00000348225 IGHV4-30-4P0DP06 118 aa13.46□□□□□ -0.26
PTN-201ENST00000348225 PMCHL1Q16048 86 aa13.46□□□□□ -0.26
PTN-201ENST00000348225 PYY3Q5JQD4 70 aa13.46□□□□□ -0.26
PTN-201ENST00000348225 CFAP126Q5VTH2 177 aa13.46□□□□□ -0.26
PTN-201ENST00000348225 C12orf57Q99622 126 aa13.46□□□□□ -0.26
PTN-201ENST00000348225 SMIM2Q9BVW6 85 aa13.46□□□□□ -0.26
PTN-201ENST00000348225 COL6A5A8TX70 2615 aa13.45□□□□□ -0.26
PTN-201ENST00000348225 SMIM9A6NGZ8 99 aa13.45□□□□□ -0.26
PTN-201ENST00000348225 H7C1H1 209 aa13.45□□□□□ -0.26
PTN-201ENST00000348225 RS1O15537 224 aa13.45□□□□□ -0.26
PTN-201ENST00000348225 KRTAP10-11P60412 298 aa13.45□□□□□ -0.26
PTN-201ENST00000348225 JOSD1Q15040 202 aaPredicted RBP13.45□□□□□ -0.26
PTN-201ENST00000348225 IGLV2-18A0A075B6J9 118 aa13.44□□□□□ -0.26
PTN-201ENST00000348225 ST20Q9HBF5 79 aa13.44□□□□□ -0.26
PTN-201ENST00000348225 NOP10Q9NPE3 64 aaKnown RBP13.44□□□□□ -0.26
PTN-201ENST00000348225 PLAC8L1A1L4L8 177 aa13.43□□□□□ -0.26
PTN-201ENST00000348225 M0QY20 66 aa13.43□□□□□ -0.26
PTN-201ENST00000348225 LEPROTL1O95214 131 aa13.43□□□□□ -0.26
PTN-201ENST00000348225 UFSP1Q6NVU6 142 aa13.43□□□□□ -0.26
PTN-201ENST00000348225 EDA2RQ9HAV5 297 aa13.43□□□□□ -0.26
PTN-201ENST00000348225 TRBV6-5A0A0K0K1A5 114 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 RPL32P62910 135 aaKnown RBP13.42□□□□□ -0.26
PTN-201ENST00000348225 ZFP2Q6ZN57 461 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 OVOL2Q9BRP0 275 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 HSPB8Q9UJY1 196 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 IGHV3-73A0A0B4J1V6 119 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 K7EMI3 77 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 HBDP02042 147 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 KRTDAPP60985 99 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 Q6ZTI0 123 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 OR4C5Q8NGB2 326 aa13.42□□□□□ -0.26
PTN-201ENST00000348225 DEFB135Q30KP9 77 aa13.41□□□□□ -0.26
PTN-201ENST00000348225 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
PTN-201ENST00000348225 X6R8D5 127 aa13.41□□□□□ -0.26
PTN-201ENST00000348225 TRAV4A0A0B4J268 109 aa13.4□□□□□ -0.26
PTN-201ENST00000348225 G3V4G9 280 aa13.4□□□□□ -0.26
PTN-201ENST00000348225 LAGE3Q14657 143 aa13.4□□□□□ -0.26
PTN-201ENST00000348225 A8MZ25 164 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 FCER1GP30273 86 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 TMEM70Q9BUB7 260 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 NACAE9PAV3 2078 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 A0A096LNJ9 63 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms