RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RBMY1EA6NEQ0 496 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP1-202ENST00000346416 RBMY1DP0C7P1 496 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP1-202ENST00000346416 IFI27L1Q96BM0 104 aa10.42□□□□□ -0.74
CDK5RAP1-202ENST00000346416 JPT2Q9H910 190 aa10.42□□□□□ -0.74
CDK5RAP1-202ENST00000346416 RBMY1A1P0DJD3 496 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP1-202ENST00000346416 RBMY1CP0DJD4 496 aa10.41□□□□□ -0.74
CDK5RAP1-202ENST00000346416 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
CDK5RAP1-202ENST00000346416 LINC00315P59091 139 aa10.41□□□□□ -0.74
CDK5RAP1-202ENST00000346416 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP1-202ENST00000346416 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP1-202ENST00000346416 NDUFA7O95182 113 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 SUMO2P61956 95 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 POM121L12Q8N7R1 296 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 TMEM158Q8WZ71 300 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 C18orf15Q96N68 181 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 SMIM2Q9BVW6 85 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 LAGE3Q14657 143 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
CDK5RAP1-202ENST00000346416 NSD1Q96L73 2696 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP1-202ENST00000346416 A0A087WWL8 130 aa10.39□□□□□ -0.75
CDK5RAP1-202ENST00000346416 PROK1P58294 105 aa10.39□□□□□ -0.75
CDK5RAP1-202ENST00000346416 C20orf78Q9BR46 151 aa10.39□□□□□ -0.75
CDK5RAP1-202ENST00000346416 CBY3A6NI87 242 aa10.39□□□□□ -0.75
CDK5RAP1-202ENST00000346416 ODF3L2Q3SX64 289 aa10.39□□□□□ -0.75
CDK5RAP1-202ENST00000346416 TRGV11A0A075B6L2 103 aa10.38□□□□□ -0.75
CDK5RAP1-202ENST00000346416 HTN1P15515 57 aa10.38□□□□□ -0.75
CDK5RAP1-202ENST00000346416 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP1-202ENST00000346416 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
CDK5RAP1-202ENST00000346416 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
CDK5RAP1-202ENST00000346416 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
CDK5RAP1-202ENST00000346416 GOLT1BQ9Y3E0 138 aa10.38□□□□□ -0.75
CDK5RAP1-202ENST00000346416 PPP1R17O96001 155 aa10.37□□□□□ -0.75
CDK5RAP1-202ENST00000346416 ADARB2-AS1A8MUL3 147 aa10.37□□□□□ -0.75
CDK5RAP1-202ENST00000346416 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
CDK5RAP1-202ENST00000346416 SLC25A34Q6PIV7 304 aa10.37□□□□□ -0.75
CDK5RAP1-202ENST00000346416 F5H697 171 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 G0S2P27469 103 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 ZNF876PQ49A33 203 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 JMJD1CQ15652 2540 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 HIVEP1P15822 2718 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 NUDT3O95989 172 aa10.36□□□□□ -0.75
CDK5RAP1-202ENST00000346416 INAFM1C9JVW0 142 aa10.35□□□□□ -0.75
CDK5RAP1-202ENST00000346416 SAP30O75446 220 aa10.35□□□□□ -0.75
CDK5RAP1-202ENST00000346416 PRM2P04554 102 aa10.35□□□□□ -0.75
CDK5RAP1-202ENST00000346416 GAGE1Q13065 139 aa10.35□□□□□ -0.75
CDK5RAP1-202ENST00000346416 STPG4Q8N801 248 aa10.35□□□□□ -0.75
CDK5RAP1-202ENST00000346416 CRYGDP07320 174 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 PRSS1P07477 247 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 ORMDL2Q53FV1 153 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 TMEM208Q9BTX3 173 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 CSTL1Q9H114 145 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 DKK2Q9UBU2 259 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 K7EMI3 77 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
CDK5RAP1-202ENST00000346416 DLEU1O43261 78 aa10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 ATP5LO75964 103 aa10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 STHQ8IWL8 128 aa10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 FN1P02751 2386 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 INSP01308 110 aa10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 ZNF56Q15929 161 aa10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 LINC01587Q99440 93 aa10.33□□□□□ -0.76
CDK5RAP1-202ENST00000346416 KRTAP10-3P60369 221 aa10.32□□□□□ -0.76
CDK5RAP1-202ENST00000346416 ODF1Q14990 250 aa10.32□□□□□ -0.76
CDK5RAP1-202ENST00000346416 NEGR1Q7Z3B1 354 aa10.32□□□□□ -0.76
CDK5RAP1-202ENST00000346416 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 RPL32P62910 135 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 M0QY20 66 aa10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 COX8AP10176 69 aa10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 TRPT1Q86TN4 253 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 TOMM6Q96B49 74 aa10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 NOTCH3Q9UM47 2321 aa10.31□□□□□ -0.76
CDK5RAP1-202ENST00000346416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 C12orf54Q6X4T0 127 aa10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 SDHAF1A6NFY7 115 aa10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 ZNF415Q09FC8 603 aa10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 C2orf66Q6UXQ4 117 aa10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 ZMAT4Q9H898 229 aa10.3□□□□□ -0.76
CDK5RAP1-202ENST00000346416 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 M0R2P5 195 aa10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 VCYO14598 125 aa10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 MORN3Q6PF18 240 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 C11orf72Q8NBR9 251 aa10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 ORAOV1Q8WV07 137 aa10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 SCGB3A1Q96QR1 104 aa10.29□□□□□ -0.76
CDK5RAP1-202ENST00000346416 DEFB104AQ8WTQ1 72 aa10.28□□□□□ -0.76
CDK5RAP1-202ENST00000346416 KIR2DL4Q99706 377 aa10.28□□□□□ -0.76
CDK5RAP1-202ENST00000346416 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
CDK5RAP1-202ENST00000346416 CMC4P56277 68 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms