RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 ID1P41134 155 aa14.3□□□□□ -0.12
LYSMD4-202ENST00000344791 KLHL30-AS1Q8NEE0 82 aa14.3□□□□□ -0.12
LYSMD4-202ENST00000344791 RPL24P83731 157 aaKnown RBP14.29□□□□□ -0.12
LYSMD4-202ENST00000344791 SUMO4Q6EEV6 95 aa14.29□□□□□ -0.12
LYSMD4-202ENST00000344791 PRB1P04280 392 aa14.29□□□□□ -0.12
LYSMD4-202ENST00000344791 AMTNQ6UX39 209 aa14.29□□□□□ -0.12
LYSMD4-202ENST00000344791 PRADC1Q9BSG0 188 aa14.28□□□□□ -0.12
LYSMD4-202ENST00000344791 ZNF56Q15929 161 aa14.28□□□□□ -0.12
LYSMD4-202ENST00000344791 SCGB1D4Q6XE38 83 aa14.28□□□□□ -0.12
LYSMD4-202ENST00000344791 KLLNB2CW77 178 aa14.28□□□□□ -0.12
LYSMD4-202ENST00000344791 PSMB8P28062 276 aa14.28□□□□□ -0.12
LYSMD4-202ENST00000344791 CFHR3Q02985 330 aa14.28□□□□□ -0.12
LYSMD4-202ENST00000344791 LINC00315P59091 139 aa14.27□□□□□ -0.13
LYSMD4-202ENST00000344791 MYMXA0A1B0GTQ4 84 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 SLC25A16P16260 332 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 DEFB136Q30KP8 78 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 PHLDA1Q8WV24 401 aaPredicted RBP14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 TRAV12-1A0A0B4J245 112 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 SDHAF1A6NFY7 115 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 ZNF815PA8K554 130 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 PRM2P04554 102 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 TM2D2Q9BX73 214 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 KIF25-AS1Q9Y6Z4 181 aa14.26□□□□□ -0.13
LYSMD4-202ENST00000344791 Q8N1Y9 231 aa14.25□□□□□ -0.13
LYSMD4-202ENST00000344791 OPRPNQ99935 248 aaPredicted RBP14.25□□□□□ -0.13
LYSMD4-202ENST00000344791 EPG5Q9HCE0 2579 aa14.25□□□□□ -0.13
LYSMD4-202ENST00000344791 C12orf74Q32Q52 190 aa14.25□□□□□ -0.13
LYSMD4-202ENST00000344791 PLEKHB2Q96CS7 222 aa14.25□□□□□ -0.13
LYSMD4-202ENST00000344791 IGHV3-73A0A0B4J1V6 119 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 ZFP2Q6ZN57 461 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 APRG1Q8IVJ8 170 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 ZNF479Q96JC4 524 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 WNK1Q9H4A3 2382 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 TSHBP01222 138 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 CRYGDP07320 174 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 BEX4Q9NWD9 120 aaPredicted RBP14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 C11orf86A6NJI1 115 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 H3BMG7 143 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 LGALS1P09382 135 aaKnown RBP14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 KIR2DL4Q99706 377 aa14.24□□□□□ -0.13
LYSMD4-202ENST00000344791 IGHV4OR15-8A0A075B7B6 117 aa14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 A0A087WW49 117 aa14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 IGLL5B9A064 214 aa14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 SNRPD3P62318 126 aaKnown RBP14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 DUX3Q96PT4 197 aa14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 CCDC168Q8NDH2 2452 aa14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 TMEM170BQ5T4T1 132 aa14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 OR5A1Q8NGJ0 315 aa14.23□□□□□ -0.13
LYSMD4-202ENST00000344791 SRSF9Q13242 221 aaKnown RBP eCLIP14.22□□□□□ -0.13
LYSMD4-202ENST00000344791 C18orf65Q6ZTR6 163 aa14.22□□□□□ -0.13
LYSMD4-202ENST00000344791 ZNF469Q96JG9 3925 aaPredicted RBP14.22□□□□□ -0.13
LYSMD4-202ENST00000344791 MED14OSP0DP75 135 aa14.21□□□□□ -0.13
LYSMD4-202ENST00000344791 IGHV3-64A0A075B6Q5 118 aa14.21□□□□□ -0.13
LYSMD4-202ENST00000344791 A0A0J9YX75 114 aa14.21□□□□□ -0.13
LYSMD4-202ENST00000344791 K7EMT4 169 aa14.21□□□□□ -0.13
LYSMD4-202ENST00000344791 NF1P21359 2839 aa14.21□□□□□ -0.14
LYSMD4-202ENST00000344791 TEX48A0A1B0GUV7 120 aa14.2□□□□□ -0.14
LYSMD4-202ENST00000344791 TRBV7-3A0A075B6L6 115 aa14.2□□□□□ -0.14
LYSMD4-202ENST00000344791 IGHV3-16A0A0C4DH30 117 aa14.2□□□□□ -0.14
LYSMD4-202ENST00000344791 BRI3O95415 125 aa14.2□□□□□ -0.14
LYSMD4-202ENST00000344791 HOXD3P31249 432 aaPredicted RBP14.2□□□□□ -0.14
LYSMD4-202ENST00000344791 KHDC1LQ5JSQ8 128 aa14.2□□□□□ -0.14
LYSMD4-202ENST00000344791 LINC01356Q8N9X3 169 aa14.2□□□□□ -0.14
LYSMD4-202ENST00000344791 KNCNA6PVL3 124 aa14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 POLR2KP53803 58 aaKnown RBP14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 ZNF876PQ49A33 203 aa14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 E9PLD3 99 aa14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 PPP1R17O96001 155 aa14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 WFDC2Q14508 124 aa14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 CHD6Q8TD26 2715 aa14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 USP24Q9UPU5 2620 aa14.19□□□□□ -0.14
LYSMD4-202ENST00000344791 VCYO14598 125 aa14.18□□□□□ -0.14
LYSMD4-202ENST00000344791 APOMO95445 188 aa14.18□□□□□ -0.14
LYSMD4-202ENST00000344791 NACAE9PAV3 2078 aa14.18□□□□□ -0.14
LYSMD4-202ENST00000344791 IGLV4-69A0A075B6H9 119 aa14.18□□□□□ -0.14
LYSMD4-202ENST00000344791 NXPH4O95158 308 aa14.18□□□□□ -0.14
LYSMD4-202ENST00000344791 SLURP1P55000 103 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 TRBV7-9A0A0J9YWB2 115 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 IGIPA6NJ69 53 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 K7EQG2 157 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 HOXA3O43365 443 aaPredicted RBP14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 P0DMU3 169 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 FAM231AP0DMU4 169 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 FAM231CP0DMU5 169 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 SH2D6Q7Z4S9 175 aa14.17□□□□□ -0.14
LYSMD4-202ENST00000344791 IGHV1OR15-1A0A075B7D0 117 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 G3V4G9 280 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 PGPEP1Q9NXJ5 209 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 PMVKQ15126 192 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 MORN3Q6PF18 240 aaPredicted RBP14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 ZNRF2Q8NHG8 242 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 MRPL16Q9NX20 251 aaKnown RBP14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 PROK1P58294 105 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 TCTEX1D4Q5JR98 221 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 FOXI2Q6ZQN5 318 aa14.16□□□□□ -0.14
LYSMD4-202ENST00000344791 TSPEAR-AS2P59090 65 aa14.15□□□□□ -0.14
LYSMD4-202ENST00000344791 COTL1Q14019 142 aa14.14□□□□□ -0.15
LYSMD4-202ENST00000344791 TAL2Q16559 108 aa14.14□□□□□ -0.15
LYSMD4-202ENST00000344791 ETDBQ3ZM63 59 aa14.14□□□□□ -0.15
LYSMD4-202ENST00000344791 SYT8Q8NBV8 401 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms