RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 FOSL1P15407 271 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 SLURP1P55000 103 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 LINC00315P59091 139 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 CHAC1Q9BUX1 264 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 TRBV25-1A0A075B6N4 114 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 TMEM89A2RUT3 159 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 H3BUT2 72 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 KHDC1LQ5JSQ8 128 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 MAPKAPK5-AS1Q8N8E1 139 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 CR1P17927 2039 aa11.08□□□□□ -0.64
VIPAS39-202ENST00000343765 K7EMI3 77 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 FSHBP01225 129 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 ELANEP08246 267 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 Q8N1Y9 231 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 RNASE8Q8TDE3 154 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 Q96MF0 132 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 F8VRH5 84 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 H7C1H1 209 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 PLNP26678 52 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 TCTEX1D4Q5JR98 221 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 JMJD8Q96S16 334 aa11.07□□□□□ -0.64
VIPAS39-202ENST00000343765 IGHV3-16A0A0C4DH30 117 aa11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 HTN1P15515 57 aa11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 CDKN1BP46527 198 aa11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 FXYD2P54710 66 aa11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 DUSP14O95147 198 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 BAALCQ8WXS3 180 aa11.06□□□□□ -0.64
VIPAS39-202ENST00000343765 H3BRM9 83 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 NEXN-AS1Q8NBZ9 246 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 KNCNA6PVL3 124 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 ZNF56Q15929 161 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 K7ERJ3 54 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 PPP1R17O96001 155 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 TP53TG1Q9Y2A0 90 aa11.05□□□□□ -0.64
VIPAS39-202ENST00000343765 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 LGALS9O00182 355 aa11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 EMP1P54849 157 aa11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 RPL39P62891 51 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 ZNF256Q9Y2P7 627 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 IGHV1OR15-1A0A075B7D0 117 aa11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
VIPAS39-202ENST00000343765 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
VIPAS39-202ENST00000343765 POM121L12Q8N7R1 296 aa11.03□□□□□ -0.64
VIPAS39-202ENST00000343765 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
VIPAS39-202ENST00000343765 ODF3Q96PU9 254 aa11.03□□□□□ -0.64
VIPAS39-202ENST00000343765 SDHAF1A6NFY7 115 aa11.03□□□□□ -0.64
VIPAS39-202ENST00000343765 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
VIPAS39-202ENST00000343765 DEFB131AP59861 70 aa11.02□□□□□ -0.64
VIPAS39-202ENST00000343765 HIGD1BQ9P298 99 aa11.02□□□□□ -0.64
VIPAS39-202ENST00000343765 ZFP2Q6ZN57 461 aa11.02□□□□□ -0.65
VIPAS39-202ENST00000343765 SYT8Q8NBV8 401 aa11.02□□□□□ -0.65
VIPAS39-202ENST00000343765 KIR2DL4Q99706 377 aa11.02□□□□□ -0.65
VIPAS39-202ENST00000343765 NOTCH2Q04721 2471 aa11.02□□□□□ -0.65
VIPAS39-202ENST00000343765 OR11H12B2RN74 326 aa11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 PRM2P04554 102 aa11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 FOXI2Q6ZQN5 318 aa11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 OR11H1Q8NG94 326 aa11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 POLR2KP53803 58 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
VIPAS39-202ENST00000343765 VCYO14598 125 aa11□□□□□ -0.65
VIPAS39-202ENST00000343765 RBMY1A1P0DJD3 496 aaKnown RBP11□□□□□ -0.65
VIPAS39-202ENST00000343765 RBMY1CP0DJD4 496 aa11□□□□□ -0.65
VIPAS39-202ENST00000343765 RBMY1FQ15415 496 aaKnown RBP11□□□□□ -0.65
VIPAS39-202ENST00000343765 AMTNQ6UX39 209 aa11□□□□□ -0.65
VIPAS39-202ENST00000343765 JMJD1CQ15652 2540 aa11□□□□□ -0.65
VIPAS39-202ENST00000343765 TSHBP01222 138 aa11□□□□□ -0.65
VIPAS39-202ENST00000343765 SMIM13P0DJ93 91 aa11□□□□□ -0.65
VIPAS39-202ENST00000343765 IGHV3-73A0A0B4J1V6 119 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 CRYGDP07320 174 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 CEND1Q8N111 149 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 MORN3Q6PF18 240 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 LINC01619G3V211 115 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 TMEM61Q8N0U2 210 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 C11orf44Q8N8P7 122 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
VIPAS39-202ENST00000343765 M0QY20 66 aa10.98□□□□□ -0.65
VIPAS39-202ENST00000343765 CST9LQ9H4G1 147 aa10.98□□□□□ -0.65
VIPAS39-202ENST00000343765 MYMXA0A1B0GTQ4 84 aa10.98□□□□□ -0.65
VIPAS39-202ENST00000343765 A0A1W2PPM0 123 aa10.98□□□□□ -0.65
VIPAS39-202ENST00000343765 GTF2H5Q6ZYL4 71 aa10.98□□□□□ -0.65
VIPAS39-202ENST00000343765 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
VIPAS39-202ENST00000343765 IGIPA6NJ69 53 aa10.97□□□□□ -0.65
VIPAS39-202ENST00000343765 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
VIPAS39-202ENST00000343765 KRTAP1-3Q8IUG1 177 aa10.97□□□□□ -0.65
VIPAS39-202ENST00000343765 DLX4Q92988 240 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms