RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 IGLC6P0CF74 106 aa12.52□□□□□ -0.4
RDX-201ENST00000343115 Q6ZQT7 251 aa12.52□□□□□ -0.4
RDX-201ENST00000343115 ZNF48Q96MX3 618 aaPredicted RBP12.52□□□□□ -0.41
RDX-201ENST00000343115 TRAV13-1A0A0B4J241 112 aa12.51□□□□□ -0.41
RDX-201ENST00000343115 A8MWV9 139 aa12.51□□□□□ -0.41
RDX-201ENST00000343115 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
RDX-201ENST00000343115 DLX4Q92988 240 aaPredicted RBP12.51□□□□□ -0.41
RDX-201ENST00000343115 OR13C6PQ8NH95 151 aa12.51□□□□□ -0.41
RDX-201ENST00000343115 RPL35AP18077 110 aaKnown RBP12.51□□□□□ -0.41
RDX-201ENST00000343115 C9orf47Q6ZRZ4 202 aa12.51□□□□□ -0.41
RDX-201ENST00000343115 C20orf78Q9BR46 151 aa12.51□□□□□ -0.41
RDX-201ENST00000343115 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
RDX-201ENST00000343115 MRPL53Q96EL3 112 aaKnown RBP12.51□□□□□ -0.41
RDX-201ENST00000343115 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
RDX-201ENST00000343115 PF4P02776 101 aa12.5□□□□□ -0.41
RDX-201ENST00000343115 LENEPQ9Y5L5 61 aa12.5□□□□□ -0.41
RDX-201ENST00000343115 SIVA1O15304 175 aa12.5□□□□□ -0.41
RDX-201ENST00000343115 FSTL3O95633 263 aa12.5□□□□□ -0.41
RDX-201ENST00000343115 NSUN5P1Q3KNT7 163 aa12.5□□□□□ -0.41
RDX-201ENST00000343115 ZFAND3Q9H8U3 227 aa12.5□□□□□ -0.41
RDX-201ENST00000343115 ZNF415Q09FC8 603 aa12.49□□□□□ -0.41
RDX-201ENST00000343115 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
RDX-201ENST00000343115 SH2D6Q7Z4S9 175 aa12.49□□□□□ -0.41
RDX-201ENST00000343115 TIMM21Q9BVV7 248 aa12.49□□□□□ -0.41
RDX-201ENST00000343115 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
RDX-201ENST00000343115 MRGPRG-AS1Q2M3A8 158 aa12.49□□□□□ -0.41
RDX-201ENST00000343115 FLNBO75369 2602 aaKnown RBP12.48□□□□□ -0.41
RDX-201ENST00000343115 TMEM238C9JI98 176 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 CFHR3Q02985 330 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 TMEM101Q96IK0 257 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 A0A1W2PPR1 153 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 Q5PR19 223 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 C11orf71Q6IPW1 123 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 TSSC4Q9Y5U2 329 aaPredicted RBP12.48□□□□□ -0.41
RDX-201ENST00000343115 RNASE1P07998 156 aaKnown RBP12.48□□□□□ -0.41
RDX-201ENST00000343115 SUMO4Q6EEV6 95 aa12.48□□□□□ -0.41
RDX-201ENST00000343115 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
RDX-201ENST00000343115 C20orf173Q96LM9 149 aa12.47□□□□□ -0.41
RDX-201ENST00000343115 C9JAW5 83 aa12.47□□□□□ -0.41
RDX-201ENST00000343115 TEX48A0A1B0GUV7 120 aa12.47□□□□□ -0.41
RDX-201ENST00000343115 PLEKHB2Q96CS7 222 aa12.47□□□□□ -0.41
RDX-201ENST00000343115 SLURP1P55000 103 aa12.46□□□□□ -0.41
RDX-201ENST00000343115 GATD1Q8NB37 220 aa12.46□□□□□ -0.41
RDX-201ENST00000343115 J3QQQ9 107 aa12.46□□□□□ -0.41
RDX-201ENST00000343115 IGHG2P01859 326 aa12.46□□□□□ -0.41
RDX-201ENST00000343115 GATA3P23771 443 aa12.46□□□□□ -0.41
RDX-201ENST00000343115 Q96MF0 132 aa12.46□□□□□ -0.41
RDX-201ENST00000343115 EBI3Q14213 229 aa12.46□□□□□ -0.42
RDX-201ENST00000343115 MDFICQ9P1T7 246 aa12.46□□□□□ -0.42
RDX-201ENST00000343115 I3L3M4 83 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 HTN3P15516 51 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 CHCHD5Q9BSY4 110 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 DMXL1Q9Y485 3027 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 C10orf99Q6UWK7 81 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 APRG1Q8IVJ8 170 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 Q8N1Y9 231 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 RNF185Q96GF1 192 aa12.45□□□□□ -0.42
RDX-201ENST00000343115 OPRPNQ99935 248 aaPredicted RBP12.45□□□□□ -0.42
RDX-201ENST00000343115 DOPEY1Q5JWR5 2465 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 ANKRD17O75179 2603 aaKnown RBP12.44□□□□□ -0.42
RDX-201ENST00000343115 DMXL2Q8TDJ6 3036 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 WFDC2Q14508 124 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 ZFP2Q6ZN57 461 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 M0R2P5 195 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 INSP01308 110 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 RPL36AP83881 106 aaKnown RBP12.44□□□□□ -0.42
RDX-201ENST00000343115 Q6ZS46 218 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 RPL36ALQ969Q0 106 aaKnown RBP12.44□□□□□ -0.42
RDX-201ENST00000343115 C11orf68Q9H3H3 251 aaKnown RBP12.44□□□□□ -0.42
RDX-201ENST00000343115 PRORYQ9H606 182 aa12.44□□□□□ -0.42
RDX-201ENST00000343115 FGF6P10767 208 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 TMEM141Q96I45 108 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 A0A0J9YXV3 536 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 IGLL5B9A064 214 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 SNCGO76070 127 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 Q8N6K4 173 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 ZNRF2Q8NHG8 242 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 MRPS12O15235 138 aaKnown RBP12.43□□□□□ -0.42
RDX-201ENST00000343115 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
RDX-201ENST00000343115 A0A1B0GV72 72 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 H3BUA1 57 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 GAGE4Q13068 117 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 GAGE5Q13069 117 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 IGHV4OR15-8A0A075B7B6 117 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 A0A087WW49 117 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 F8W735 103 aaPredicted RBP12.42□□□□□ -0.42
RDX-201ENST00000343115 PRR9Q5T870 116 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 BAALCQ8WXS3 180 aa12.42□□□□□ -0.42
RDX-201ENST00000343115 LINC01619G3V211 115 aa12.41□□□□□ -0.42
RDX-201ENST00000343115 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
RDX-201ENST00000343115 VPREB3Q9UKI3 123 aa12.41□□□□□ -0.42
RDX-201ENST00000343115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
RDX-201ENST00000343115 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
RDX-201ENST00000343115 DNAL4O96015 105 aa12.41□□□□□ -0.42
RDX-201ENST00000343115 C2orf91Q6ZV80 131 aa12.41□□□□□ -0.42
RDX-201ENST00000343115 RASL10AQ92737 203 aa12.41□□□□□ -0.42
RDX-201ENST00000343115 ATP6V0BQ99437 205 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms