RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 NUP210LQ5VU65 1888 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.23□□□□□ -1.41
UBE4B-202ENST00000343090 IGKV1D-37A0A075B6S9 117 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 IGKV2-29A2NJV5 120 aaPredicted RBP6.23□□□□□ -1.41
UBE4B-202ENST00000343090 C19orf71A6NCJ1 209 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 SS18Q15532 418 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 APRG1Q8IVJ8 170 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 WI2-2373I1.2A0A1W2PRP0 233 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 RBAKDNA6NC62 111 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 NXPH4O95158 308 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 J3KT08 172 aa6.23□□□□□ -1.41
UBE4B-202ENST00000343090 MRPL53Q96EL3 112 aaKnown RBP6.23□□□□□ -1.41
UBE4B-202ENST00000343090 PTPRQQ9UMZ3 2332 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 SLURP1P55000 103 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 CLPSL2Q6UWE3 100 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 DNAJC30Q96LL9 226 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 F5H768 121 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 SUMO4Q6EEV6 95 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 TM2D2Q9BX73 214 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 IGKV2D-26A0A0A0MRZ7 120 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 TCL1BO95988 128 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 PRB1P04280 392 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 XGP55808 180 aa6.22□□□□□ -1.41
UBE4B-202ENST00000343090 ANKHD1Q8IWZ3 2542 aaKnown RBP6.22□□□□□ -1.41
UBE4B-202ENST00000343090 ZNF493Q6ZR52 646 aa6.21□□□□□ -1.41
UBE4B-202ENST00000343090 Q8NA96 180 aa6.21□□□□□ -1.41
UBE4B-202ENST00000343090 TMEM243Q9BU79 118 aa6.21□□□□□ -1.41
UBE4B-202ENST00000343090 C5orf56Q8N8D9 126 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 U3KQE9 123 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 IGHG4P01861 327 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 ELANEP08246 267 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 IGF2-ASQ6U949 168 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 RS1O15537 224 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 CGB3P0DN86 165 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 CGB7P0DN87 165 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 ZFP2Q6ZN57 461 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 NOP10Q9NPE3 64 aaKnown RBP6.21□□□□□ -1.42
UBE4B-202ENST00000343090 TNCP24821 2201 aa6.21□□□□□ -1.42
UBE4B-202ENST00000343090 TRBV12-3P01733 135 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
UBE4B-202ENST00000343090 LINC01620Q4KN68 170 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 RMI2Q96E14 147 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 VPREB3Q9UKI3 123 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 H3BUA1 57 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 URB1-AS1Q96HZ7 61 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 FANCD2OSQ96PS1 177 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 NACAE9PAV3 2078 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 CENPFP49454 3210 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 MUC22E2RYF6 1773 aaPredicted RBP6.2□□□□□ -1.42
UBE4B-202ENST00000343090 J3QLI3 93 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 CRYGCP07315 174 aa6.2□□□□□ -1.42
UBE4B-202ENST00000343090 EIF4EBP1Q13541 118 aaPredicted RBP6.2□□□□□ -1.42
UBE4B-202ENST00000343090 LINC01548A6NM66 108 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 DAD1P61803 113 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 UNQ9165/PRO28630Q6UXU0 137 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 A4D1N5 150 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 SPANXCQ9NY87 97 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 LENEPQ9Y5L5 61 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 RBMY1FQ15415 496 aaKnown RBP6.19□□□□□ -1.42
UBE4B-202ENST00000343090 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 ZNF80P51504 273 aaPredicted RBP6.19□□□□□ -1.42
UBE4B-202ENST00000343090 MAPKAPK5-AS1Q8N8E1 139 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
UBE4B-202ENST00000343090 CUL9Q8IWT3 2517 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 NDUFA11Q86Y39 141 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 MLST8Q9BVC4 326 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 IGHV4OR15-8A0A075B7B6 117 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 A0A087WW49 117 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 Q8N1Y9 231 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 ACACBO00763 2458 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 A0A0J9YY99 117 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 Q9H8V8 135 aa6.18□□□□□ -1.42
UBE4B-202ENST00000343090 C10orf105Q8TEF2 133 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 SIRPDQ9H106 197 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 HERVK_113P63121 156 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 RHOHQ15669 191 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 TRAV12-1A0A0B4J245 112 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 XCL1P47992 114 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 C9orf47Q6ZRZ4 202 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 CCL24O00175 119 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 CFAP126Q5VTH2 177 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 TANC2Q9HCD6 1990 aa6.17□□□□□ -1.42
UBE4B-202ENST00000343090 CSPG4Q6UVK1 2322 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 TRBV10-2A0A0K0K1G8 114 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 PLXNB1O43157 2135 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 APOC4P55056 127 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 DAND5Q8N907 189 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
UBE4B-202ENST00000343090 BAALCQ8WXS3 180 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 ACYP1P07311 99 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 Q6ZQT7 251 aa6.16□□□□□ -1.42
UBE4B-202ENST00000343090 PIEZO2Q9H5I5 2752 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms