RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MED14OSP0DP75 135 aa12.17□□□□□ -0.46
LITAF-201ENST00000339430 SCGB3A1Q96QR1 104 aa12.17□□□□□ -0.46
LITAF-201ENST00000339430 CD7P09564 240 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 GCSHP23434 173 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 ORMDL2Q53FV1 153 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 C20orf78Q9BR46 151 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 ZNF580Q9UK33 172 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 TRBV7-9A0A0J9YWB2 115 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 H3BRM9 83 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 H3BUT2 72 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 SYNJ2BPP57105 145 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 JMJD8Q96S16 334 aa12.16□□□□□ -0.46
LITAF-201ENST00000339430 NSD1Q96L73 2696 aaPredicted RBP12.15□□□□□ -0.46
LITAF-201ENST00000339430 A0A087WWL8 130 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 INAFM1C9JVW0 142 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 TOMM6Q96B49 74 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 CHAC1Q9BUX1 264 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 CSTL1Q9H114 145 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 C9orf118A6NHY6 69 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 MAPKAPK5-AS1Q8N8E1 139 aa12.15□□□□□ -0.46
LITAF-201ENST00000339430 FXYD2P54710 66 aa12.14□□□□□ -0.47
LITAF-201ENST00000339430 C2orf66Q6UXQ4 117 aa12.14□□□□□ -0.47
LITAF-201ENST00000339430 IGHV4OR15-8A0A075B7B6 117 aa12.14□□□□□ -0.47
LITAF-201ENST00000339430 A0A087WW49 117 aa12.14□□□□□ -0.47
LITAF-201ENST00000339430 ZNF418Q8TF45 676 aaPredicted RBP12.14□□□□□ -0.47
LITAF-201ENST00000339430 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
LITAF-201ENST00000339430 H7C1H1 209 aa12.13□□□□□ -0.47
LITAF-201ENST00000339430 K7EMI3 77 aa12.13□□□□□ -0.47
LITAF-201ENST00000339430 LINC00315P59091 139 aa12.13□□□□□ -0.47
LITAF-201ENST00000339430 Q8N2B8 174 aa12.13□□□□□ -0.47
LITAF-201ENST00000339430 CHTOPQ9Y3Y2 248 aaKnown RBP12.13□□□□□ -0.47
LITAF-201ENST00000339430 F8VRH5 84 aa12.13□□□□□ -0.47
LITAF-201ENST00000339430 PLNP26678 52 aa12.13□□□□□ -0.47
LITAF-201ENST00000339430 GAGE10A6NGK3 116 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 F5H697 171 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 NXPH4O95158 308 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 HIGD1BQ9P298 99 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 A0A0J9YX75 114 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 HILS1P60008 231 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 SNRPD3P62318 126 aaKnown RBP12.12□□□□□ -0.47
LITAF-201ENST00000339430 SPINK13Q1W4C9 94 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 FAM74A4Q5TZK3 123 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 SUMO4Q6EEV6 95 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 Q6ZSV7 163 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 NEXN-AS1Q8NBZ9 246 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 BAALCQ8WXS3 180 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
LITAF-201ENST00000339430 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
LITAF-201ENST00000339430 CYSRT1A8MQ03 144 aa12.11□□□□□ -0.47
LITAF-201ENST00000339430 GAGE12BA1L429 117 aa12.11□□□□□ -0.47
LITAF-201ENST00000339430 K7EQG2 157 aa12.11□□□□□ -0.47
LITAF-201ENST00000339430 K7ERJ3 54 aa12.11□□□□□ -0.47
LITAF-201ENST00000339430 RNASE1P07998 156 aaKnown RBP12.11□□□□□ -0.47
LITAF-201ENST00000339430 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
LITAF-201ENST00000339430 F8P00451 2351 aa12.1□□□□□ -0.47
LITAF-201ENST00000339430 DUSP14O95147 198 aaKnown RBP12.1□□□□□ -0.47
LITAF-201ENST00000339430 LGALS1P09382 135 aaKnown RBP12.1□□□□□ -0.47
LITAF-201ENST00000339430 HLA-DRB4P13762 266 aa12.1□□□□□ -0.47
LITAF-201ENST00000339430 HOXD3P31249 432 aaPredicted RBP12.1□□□□□ -0.47
LITAF-201ENST00000339430 HLA-DRB4X5D2U9 266 aa12.1□□□□□ -0.47
LITAF-201ENST00000339430 FN1P02751 2386 aaKnown RBP12.1□□□□□ -0.47
LITAF-201ENST00000339430 RBX1P62877 108 aa12.1□□□□□ -0.47
LITAF-201ENST00000339430 DEFB136Q30KP8 78 aa12.1□□□□□ -0.47
LITAF-201ENST00000339430 CST9LQ9H4G1 147 aa12.1□□□□□ -0.47
LITAF-201ENST00000339430 TMEM89A2RUT3 159 aa12.09□□□□□ -0.47
LITAF-201ENST00000339430 SMIM13P0DJ93 91 aa12.09□□□□□ -0.47
LITAF-201ENST00000339430 RNF151Q2KHN1 245 aa12.09□□□□□ -0.47
LITAF-201ENST00000339430 C18orf65Q6ZTR6 163 aa12.09□□□□□ -0.47
LITAF-201ENST00000339430 Q8N1Y9 231 aa12.09□□□□□ -0.47
LITAF-201ENST00000339430 POM121L12Q8N7R1 296 aa12.09□□□□□ -0.47
LITAF-201ENST00000339430 CBY1Q9Y3M2 126 aa12.09□□□□□ -0.47
LITAF-201ENST00000339430 IGHV3-16A0A0C4DH30 117 aa12.08□□□□□ -0.47
LITAF-201ENST00000339430 PRSS29PA6NIE9 313 aa12.08□□□□□ -0.47
LITAF-201ENST00000339430 PPP1R17O96001 155 aa12.08□□□□□ -0.47
LITAF-201ENST00000339430 CEND1Q8N111 149 aa12.08□□□□□ -0.48
LITAF-201ENST00000339430 NHP2Q9NX24 153 aaKnown RBP12.08□□□□□ -0.48
LITAF-201ENST00000339430 CDKN1BP46527 198 aa12.07□□□□□ -0.48
LITAF-201ENST00000339430 TP53TG1Q9Y2A0 90 aa12.07□□□□□ -0.48
LITAF-201ENST00000339430 SETD2Q9BYW2 2564 aaPredicted RBP12.07□□□□□ -0.48
LITAF-201ENST00000339430 ELANEP08246 267 aa12.07□□□□□ -0.48
LITAF-201ENST00000339430 EMP1P54849 157 aa12.07□□□□□ -0.48
LITAF-201ENST00000339430 RPL39P62891 51 aaKnown RBP12.07□□□□□ -0.48
LITAF-201ENST00000339430 HIST2H2BDQ6DRA6 164 aa12.07□□□□□ -0.48
LITAF-201ENST00000339430 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
LITAF-201ENST00000339430 GTF2H5Q6ZYL4 71 aa12.07□□□□□ -0.48
LITAF-201ENST00000339430 A0A1W2PPM0 123 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 SLURP1P55000 103 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 ZFP2Q6ZN57 461 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 OR11H12B2RN74 326 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 K7EP34 96 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 POLR2KP53803 58 aaKnown RBP12.06□□□□□ -0.48
LITAF-201ENST00000339430 ZNF56Q15929 161 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 OR11H1Q8NG94 326 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 OR11H2Q8NH07 326 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 C9orf85Q96MD7 179 aa12.06□□□□□ -0.48
LITAF-201ENST00000339430 ZNF256Q9Y2P7 627 aaPredicted RBP12.06□□□□□ -0.48
LITAF-201ENST00000339430 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 SDHAF1A6NFY7 115 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms