RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SPART-AS1P0CW21 52 aa10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 FAM222AQ5U5X8 452 aa10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 FAM104BQ5XKR9 115 aa10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 ZFP2Q6ZN57 461 aa10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 TRAV4A0A0B4J268 109 aa10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 NHLRC4P0CG21 123 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 CFAP126Q5VTH2 177 aa10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-202ENST00000339255 GAGE12BA1L429 117 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 DEFB4AO15263 64 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 RS1O15537 224 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 GAGE7O76087 117 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 CRYGDP07320 174 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 SLAQ13239 276 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 AMN1Q8IY45 258 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 JPT2Q9H910 190 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
NIPAL3-202ENST00000339255 A0A087WWL8 130 aa10.36□□□□□ -0.75
NIPAL3-202ENST00000339255 PPBPP02775 128 aa10.36□□□□□ -0.75
NIPAL3-202ENST00000339255 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
NIPAL3-202ENST00000339255 MRAP2Q96G30 205 aa10.36□□□□□ -0.75
NIPAL3-202ENST00000339255 DEFB130BP0DP73 79 aa10.35□□□□□ -0.75
NIPAL3-202ENST00000339255 DEFB130AP0DP74 79 aa10.35□□□□□ -0.75
NIPAL3-202ENST00000339255 RAB4AP20338 218 aa10.35□□□□□ -0.75
NIPAL3-202ENST00000339255 FABP9Q0Z7S8 132 aa10.35□□□□□ -0.75
NIPAL3-202ENST00000339255 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
NIPAL3-202ENST00000339255 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
NIPAL3-202ENST00000339255 TRGC2P03986 189 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 MGPP08493 103 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 DAD1P61803 113 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 SAMD10Q9BYL1 202 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 F5H697 171 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 LINC00315P59091 139 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 ZNF56Q15929 161 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 MRPL51Q4U2R6 128 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 RNF185Q96GF1 192 aa10.34□□□□□ -0.75
NIPAL3-202ENST00000339255 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
NIPAL3-202ENST00000339255 H7C1H1 209 aa10.33□□□□□ -0.76
NIPAL3-202ENST00000339255 PPP1R17O96001 155 aa10.33□□□□□ -0.76
NIPAL3-202ENST00000339255 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
NIPAL3-202ENST00000339255 CELA1Q9UNI1 258 aa10.33□□□□□ -0.76
NIPAL3-202ENST00000339255 LAMTOR2Q9Y2Q5 125 aa10.33□□□□□ -0.76
NIPAL3-202ENST00000339255 C1orf196B1AJZ1 125 aa10.32□□□□□ -0.76
NIPAL3-202ENST00000339255 CKS2P33552 79 aa10.32□□□□□ -0.76
NIPAL3-202ENST00000339255 PHOX2AO14813 284 aa10.31□□□□□ -0.76
NIPAL3-202ENST00000339255 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
NIPAL3-202ENST00000339255 ZNF479Q96JC4 524 aa10.31□□□□□ -0.76
NIPAL3-202ENST00000339255 U3KQK5 164 aa10.31□□□□□ -0.76
NIPAL3-202ENST00000339255 D6R8Y8 96 aa10.31□□□□□ -0.76
NIPAL3-202ENST00000339255 ATP5G1P05496 136 aa10.31□□□□□ -0.76
NIPAL3-202ENST00000339255 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
NIPAL3-202ENST00000339255 COL7A1Q02388 2944 aa10.3□□□□□ -0.76
NIPAL3-202ENST00000339255 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
NIPAL3-202ENST00000339255 SRIP30626 198 aa10.3□□□□□ -0.76
NIPAL3-202ENST00000339255 KIAA1644Q3SXP7 199 aa10.3□□□□□ -0.76
NIPAL3-202ENST00000339255 PRELID3AQ96N28 172 aa10.3□□□□□ -0.76
NIPAL3-202ENST00000339255 ALKBH7Q9BT30 221 aaPredicted RBP10.3□□□□□ -0.76
NIPAL3-202ENST00000339255 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
NIPAL3-202ENST00000339255 TRAV26-2A0A0B4J265 109 aa10.29□□□□□ -0.76
NIPAL3-202ENST00000339255 M0QY20 66 aa10.29□□□□□ -0.76
NIPAL3-202ENST00000339255 RAB5BP61020 215 aa10.29□□□□□ -0.76
NIPAL3-202ENST00000339255 C11orf45Q8TAV5 145 aa10.29□□□□□ -0.76
NIPAL3-202ENST00000339255 GATA1P15976 413 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-202ENST00000339255 TRBV10-1A0A0K0K1A3 114 aa10.28□□□□□ -0.76
NIPAL3-202ENST00000339255 TRBV6-4A0A1B0GX49 114 aa10.28□□□□□ -0.76
NIPAL3-202ENST00000339255 NCR2O95944 276 aa10.28□□□□□ -0.76
NIPAL3-202ENST00000339255 FHL2Q14192 279 aa10.28□□□□□ -0.76
NIPAL3-202ENST00000339255 C12orf74Q32Q52 190 aa10.28□□□□□ -0.76
NIPAL3-202ENST00000339255 K7EQD1 137 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BKO60814 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BJP06899 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BOP23527 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BBP33778 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BDP58876 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BCP62807 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST2H2BEQ16778 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 NRACQ8N912 160 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BHQ93079 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BNQ99877 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 HIST1H2BMQ99879 126 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 C20orf78Q9BR46 151 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 FBN3Q75N90 2809 aa10.27□□□□□ -0.77
NIPAL3-202ENST00000339255 SMKR1H3BMG3 65 aa10.26□□□□□ -0.77
NIPAL3-202ENST00000339255 RHOHQ15669 191 aa10.26□□□□□ -0.77
NIPAL3-202ENST00000339255 Q6ZSN1 163 aa10.26□□□□□ -0.77
NIPAL3-202ENST00000339255 SLC25A29Q8N8R3 303 aa10.26□□□□□ -0.77
NIPAL3-202ENST00000339255 DNAJC30Q96LL9 226 aa10.26□□□□□ -0.77
NIPAL3-202ENST00000339255 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
NIPAL3-202ENST00000339255 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms