RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ZNF415Q09FC8 603 aa11.9□□□□□ -0.5
HPS1-202ENST00000338546 ZNF664Q8N3J9 261 aa11.9□□□□□ -0.5
HPS1-202ENST00000338546 NDUFAF3Q9BU61 184 aa11.9□□□□□ -0.5
HPS1-202ENST00000338546 ZNF747Q9BV97 191 aa11.9□□□□□ -0.5
HPS1-202ENST00000338546 SPRY2O43597 315 aa11.89□□□□□ -0.51
HPS1-202ENST00000338546 FCER1GP30273 86 aa11.89□□□□□ -0.51
HPS1-202ENST00000338546 LINC01587Q99440 93 aa11.89□□□□□ -0.51
HPS1-202ENST00000338546 SPXQ9BT56 116 aa11.89□□□□□ -0.51
HPS1-202ENST00000338546 C19orf73Q9NVV2 129 aa11.89□□□□□ -0.51
HPS1-202ENST00000338546 A0A096LNJ9 63 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 TRAV26-2A0A0B4J265 109 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 MGPP08493 103 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
HPS1-202ENST00000338546 C9orf66Q5T8R8 295 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 RASL10AQ92737 203 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 ZNF876PQ49A33 203 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
HPS1-202ENST00000338546 VAMP8Q9BV40 100 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
HPS1-202ENST00000338546 KIR2DL5BA0A0G2JN68 375 aa11.87□□□□□ -0.51
HPS1-202ENST00000338546 KIR2DL5BA0A0G2JPC4 375 aa11.87□□□□□ -0.51
HPS1-202ENST00000338546 M0R2P5 195 aa11.87□□□□□ -0.51
HPS1-202ENST00000338546 CRYGDP07320 174 aa11.87□□□□□ -0.51
HPS1-202ENST00000338546 LAGE3Q14657 143 aa11.87□□□□□ -0.51
HPS1-202ENST00000338546 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
HPS1-202ENST00000338546 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
HPS1-202ENST00000338546 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
HPS1-202ENST00000338546 TRBV6-5A0A0K0K1A5 114 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 A8MWV9 139 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 ORMDL2Q53FV1 153 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 SUMO4Q6EEV6 95 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 LINC00173Q6ZV60 143 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 C11orf72Q8NBR9 251 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 MCRIP2Q9BUT9 160 aaKnown RBP11.85□□□□□ -0.51
HPS1-202ENST00000338546 XCL2Q9UBD3 114 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 F8P00451 2351 aa11.85□□□□□ -0.51
HPS1-202ENST00000338546 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 TMEM208Q9BTX3 173 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 JPT2Q9H910 190 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 A0A087WWL8 130 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 G0S2P27469 103 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 LINC01545Q5VT33 79 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 GOLT1BQ9Y3E0 138 aa11.84□□□□□ -0.51
HPS1-202ENST00000338546 LINC01549A6NIU2 74 aa11.83□□□□□ -0.52
HPS1-202ENST00000338546 F5H697 171 aa11.83□□□□□ -0.52
HPS1-202ENST00000338546 HTN1P15515 57 aa11.83□□□□□ -0.52
HPS1-202ENST00000338546 DDTP30046 118 aa11.83□□□□□ -0.52
HPS1-202ENST00000338546 WFDC9Q8NEX5 89 aa11.83□□□□□ -0.52
HPS1-202ENST00000338546 IFI27L1Q96BM0 104 aa11.83□□□□□ -0.52
HPS1-202ENST00000338546 RPL39LQ96EH5 51 aaKnown RBP11.83□□□□□ -0.52
HPS1-202ENST00000338546 PRO1933Q9H354 126 aa11.83□□□□□ -0.52
HPS1-202ENST00000338546 TRAV9-2A0A087WT02 112 aa11.82□□□□□ -0.52
HPS1-202ENST00000338546 H7C1H1 209 aa11.82□□□□□ -0.52
HPS1-202ENST00000338546 ATP5LO75964 103 aa11.82□□□□□ -0.52
HPS1-202ENST00000338546 M0QY20 66 aa11.81□□□□□ -0.52
HPS1-202ENST00000338546 RHODO00212 210 aa11.81□□□□□ -0.52
HPS1-202ENST00000338546 VCYO14598 125 aa11.81□□□□□ -0.52
HPS1-202ENST00000338546 POLR2KP53803 58 aaKnown RBP11.81□□□□□ -0.52
HPS1-202ENST00000338546 LGALS9BQ3B8N2 356 aa11.81□□□□□ -0.52
HPS1-202ENST00000338546 LGALS9CQ6DKI2 356 aa11.81□□□□□ -0.52
HPS1-202ENST00000338546 GTSCR1Q86UQ5 136 aa11.81□□□□□ -0.52
HPS1-202ENST00000338546 TMEM158Q8WZ71 300 aa11.81□□□□□ -0.52
HPS1-202ENST00000338546 LINC00587B1AMM8 73 aa11.8□□□□□ -0.52
HPS1-202ENST00000338546 GIG44P09565 113 aaPredicted RBP11.8□□□□□ -0.52
HPS1-202ENST00000338546 ZNF56Q15929 161 aa11.8□□□□□ -0.52
HPS1-202ENST00000338546 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
HPS1-202ENST00000338546 IL17DQ8TAD2 202 aa11.8□□□□□ -0.52
HPS1-202ENST00000338546 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
HPS1-202ENST00000338546 CSTL1Q9H114 145 aa11.8□□□□□ -0.52
HPS1-202ENST00000338546 PAM16Q9Y3D7 125 aa11.8□□□□□ -0.52
HPS1-202ENST00000338546 TCAPO15273 167 aa11.79□□□□□ -0.52
HPS1-202ENST00000338546 UFSP1Q6NVU6 142 aa11.79□□□□□ -0.52
HPS1-202ENST00000338546 TRBV27A0A0K0K1C4 114 aa11.79□□□□□ -0.52
HPS1-202ENST00000338546 WIPF1O43516 503 aa11.79□□□□□ -0.52
HPS1-202ENST00000338546 NUDT3O95989 172 aa11.79□□□□□ -0.52
HPS1-202ENST00000338546 SPATA45Q537H7 98 aa11.79□□□□□ -0.52
HPS1-202ENST00000338546 ZNF705AQ6ZN79 300 aaPredicted RBP11.79□□□□□ -0.52
HPS1-202ENST00000338546 RNASE8Q8TDE3 154 aaKnown RBP11.79□□□□□ -0.52
HPS1-202ENST00000338546 RS1O15537 224 aa11.78□□□□□ -0.52
HPS1-202ENST00000338546 ZFP2Q6ZN57 461 aa11.78□□□□□ -0.52
HPS1-202ENST00000338546 CSNK1G2-AS1Q8NCQ2 148 aa11.78□□□□□ -0.52
HPS1-202ENST00000338546 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
HPS1-202ENST00000338546 TOMM6Q96B49 74 aa11.77□□□□□ -0.53
HPS1-202ENST00000338546 MIEN1Q9BRT3 115 aa11.77□□□□□ -0.53
HPS1-202ENST00000338546 WFDC10AQ9H1F0 79 aa11.77□□□□□ -0.53
HPS1-202ENST00000338546 SDHAF1A6NFY7 115 aa11.76□□□□□ -0.53
HPS1-202ENST00000338546 HSBP1L1C9JCN9 74 aa11.76□□□□□ -0.53
HPS1-202ENST00000338546 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
HPS1-202ENST00000338546 AZU1P20160 251 aa11.76□□□□□ -0.53
HPS1-202ENST00000338546 DAZ2Q13117 558 aaKnown RBP11.76□□□□□ -0.53
HPS1-202ENST00000338546 CFAP126Q5VTH2 177 aa11.76□□□□□ -0.53
HPS1-202ENST00000338546 C16orf74Q96GX8 76 aa11.76□□□□□ -0.53
HPS1-202ENST00000338546 PRM2P04554 102 aa11.75□□□□□ -0.53
HPS1-202ENST00000338546 DEFA6Q01524 100 aa11.75□□□□□ -0.53
HPS1-202ENST00000338546 CIDEAO60543 219 aa11.75□□□□□ -0.53
HPS1-202ENST00000338546 ATOH7Q8N100 152 aa11.75□□□□□ -0.53
HPS1-202ENST00000338546 DNAJC30Q96LL9 226 aa11.75□□□□□ -0.53
HPS1-202ENST00000338546 IGHV3OR16-12A0A075B7B8 117 aa11.74□□□□□ -0.53
HPS1-202ENST00000338546 RHOHQ15669 191 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms