RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 NOP10Q9NPE3 64 aaKnown RBP10.62□□□□□ -0.71
RTN4-202ENST00000337526 A0A096LPF7 62 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 A4D1N5 150 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 HAMPP81172 84 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 HIGD1BQ9P298 99 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 C5orf56Q8N8D9 126 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 DENND4AQ7Z401 1863 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 DOPEY1Q5JWR5 2465 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 ANGP03950 147 aaKnown RBP10.61□□□□□ -0.71
RTN4-202ENST00000337526 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
RTN4-202ENST00000337526 TNRC6AQ8NDV7 1962 aaKnown RBP10.61□□□□□ -0.71
RTN4-202ENST00000337526 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
RTN4-202ENST00000337526 WFDC2Q14508 124 aa10.61□□□□□ -0.71
RTN4-202ENST00000337526 LINC00322Q6ZN03 302 aaPredicted RBP10.61□□□□□ -0.71
RTN4-202ENST00000337526 TRBV6-1A0A0K0K1D8 114 aa10.61□□□□□ -0.71
RTN4-202ENST00000337526 IGHV4-30-2A0A087WSY4 118 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 A0A1B0GXF2 115 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 ZFP36P26651 326 aaKnown RBP10.6□□□□□ -0.71
RTN4-202ENST00000337526 PSCAO43653 123 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 DEFB1P60022 68 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 ZNF106Q9H2Y7 1883 aaKnown RBP10.6□□□□□ -0.71
RTN4-202ENST00000337526 ODF1Q14990 250 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 CLPSL2Q6UWE3 100 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 ANKRD29Q8N6D5 301 aa10.6□□□□□ -0.71
RTN4-202ENST00000337526 MUSTN1Q8IVN3 82 aa10.59□□□□□ -0.71
RTN4-202ENST00000337526 TRAV12-1A0A0B4J245 112 aa10.59□□□□□ -0.71
RTN4-202ENST00000337526 TINCRA0A1B0GVN0 87 aa10.59□□□□□ -0.71
RTN4-202ENST00000337526 CRLF1O75462 422 aa10.59□□□□□ -0.71
RTN4-202ENST00000337526 SLURP1P55000 103 aa10.59□□□□□ -0.71
RTN4-202ENST00000337526 Q8N1Y9 231 aa10.59□□□□□ -0.71
RTN4-202ENST00000337526 LINC00574Q9H8X3 128 aa10.59□□□□□ -0.71
RTN4-202ENST00000337526 LTBP2Q14767 1821 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 XCL1P47992 114 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 CRYBA4P53673 196 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 PRSS47A8MTI9 375 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 BAALC-AS2P0C853 105 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 LOXL1Q08397 574 aaPredicted RBP10.58□□□□□ -0.72
RTN4-202ENST00000337526 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 C5orf38Q86SI9 138 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 C3orf56Q8N813 242 aa10.58□□□□□ -0.72
RTN4-202ENST00000337526 E9PLD3 99 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 CCL24O00175 119 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 IGHG4P01861 327 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
RTN4-202ENST00000337526 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 SPANXDQ9BXN6 97 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 ADAMTS9Q9P2N4 1935 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 GDF5OSQ5U4N7 250 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 BAALCQ8WXS3 180 aa10.57□□□□□ -0.72
RTN4-202ENST00000337526 APOC4P55056 127 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 TEN1Q86WV5 123 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 K7EMT4 169 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 HERV-K104P63124 156 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 NKAPP1Q8N9T2 125 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 TOMM6Q96B49 74 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 C11orf86A6NJI1 115 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
RTN4-202ENST00000337526 C10orf105Q8TEF2 133 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 TIMM17AQ99595 171 aa10.56□□□□□ -0.72
RTN4-202ENST00000337526 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
RTN4-202ENST00000337526 RS1O15537 224 aa10.55□□□□□ -0.72
RTN4-202ENST00000337526 UNQ9165/PRO28630Q6UXU0 137 aa10.55□□□□□ -0.72
RTN4-202ENST00000337526 RNF152Q8N8N0 203 aa10.55□□□□□ -0.72
RTN4-202ENST00000337526 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
RTN4-202ENST00000337526 MBD6Q96DN6 1003 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 DSCR8Q96T75 97 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 CENPFP49454 3210 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 IGHG2P01859 326 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 TMEM131Q92545 1883 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 A0A0J9YY99 117 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 RPL32P62910 135 aaKnown RBP10.54□□□□□ -0.72
RTN4-202ENST00000337526 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 SIRPDQ9H106 197 aa10.54□□□□□ -0.72
RTN4-202ENST00000337526 C22orf34Q6ZV56 151 aa10.53□□□□□ -0.72
RTN4-202ENST00000337526 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
RTN4-202ENST00000337526 B5MCH6 92 aa10.53□□□□□ -0.72
RTN4-202ENST00000337526 Q71RC1 249 aaPredicted RBP10.53□□□□□ -0.72
RTN4-202ENST00000337526 TMEM126AQ9H061 195 aa10.53□□□□□ -0.72
RTN4-202ENST00000337526 IGHV4OR15-8A0A075B7B6 117 aa10.53□□□□□ -0.72
RTN4-202ENST00000337526 A0A087WW49 117 aa10.53□□□□□ -0.72
RTN4-202ENST00000337526 Q8NA96 180 aa10.52□□□□□ -0.72
RTN4-202ENST00000337526 SND1-IT1Q9HBX3 110 aa10.52□□□□□ -0.73
RTN4-202ENST00000337526 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
RTN4-202ENST00000337526 TRBV12-3P01733 135 aa10.52□□□□□ -0.73
RTN4-202ENST00000337526 DAND5Q8N907 189 aa10.52□□□□□ -0.73
RTN4-202ENST00000337526 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
RTN4-202ENST00000337526 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
RTN4-202ENST00000337526 KIAA1549LQ6ZVL6 1849 aa10.51□□□□□ -0.73
RTN4-202ENST00000337526 TLN2Q9Y4G6 2542 aa10.51□□□□□ -0.73
RTN4-202ENST00000337526 Q6ZQT7 251 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms