RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TMEM14CQ9P0S9 112 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 A6NED7 52 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 J3QKU1 62 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 SPAG11BQ08648 103 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 WFDC2Q14508 124 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 A0A0G2JMZ2 1700 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 LRRC37A2A6NM11 1700 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 SORL1Q92673 2214 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 JMJD7-PLA2G4BH0Y9G9 81 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 TEN1Q86WV5 123 aa12.84□□□□□ -0.35
PTCH1-201ENST00000331920 HCFC1P51610 2035 aa12.83□□□□□ -0.36
PTCH1-201ENST00000331920 VPREB3Q9UKI3 123 aa12.83□□□□□ -0.36
PTCH1-201ENST00000331920 KIF26AQ9ULI4 1882 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-201ENST00000331920 SERP1Q9Y6X1 66 aa12.83□□□□□ -0.36
PTCH1-201ENST00000331920 WT1-ASQ06250 92 aa12.83□□□□□ -0.36
PTCH1-201ENST00000331920 SIRPDQ9H106 197 aa12.83□□□□□ -0.36
PTCH1-201ENST00000331920 A0A087WZ39 114 aa12.83□□□□□ -0.36
PTCH1-201ENST00000331920 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
PTCH1-201ENST00000331920 K7EN84 100 aa12.82□□□□□ -0.36
PTCH1-201ENST00000331920 V9GYY9 64 aa12.82□□□□□ -0.36
PTCH1-201ENST00000331920 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
PTCH1-201ENST00000331920 IGLV3-19P01714 112 aa12.82□□□□□ -0.36
PTCH1-201ENST00000331920 ZNF726P1Q15940 193 aa12.82□□□□□ -0.36
PTCH1-201ENST00000331920 SDIM1Q6ZPB5 146 aa12.82□□□□□ -0.36
PTCH1-201ENST00000331920 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
PTCH1-201ENST00000331920 IGKV1D-37A0A075B6S9 117 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 MIR7-3HGQ8N6C7 128 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 UBE2D4Q9Y2X8 147 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 ANAPC1Q9H1A4 1944 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 RETNQ9HD89 108 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 COX7BP24311 80 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 SPINK6Q6UWN8 80 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 RNF152Q8N8N0 203 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 A0A0J9YXV3 536 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 FLVCR1-AS1Q8TAF5 88 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 QRFPP83859 136 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 FAM240AA0A1B0GVK7 77 aa12.81□□□□□ -0.36
PTCH1-201ENST00000331920 KIR2DL5BA0A0G2JN68 375 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 KIR2DL5BA0A0G2JPC4 375 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 KIR2DL5AQ8N109 375 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 IGHV2-70P01814 119 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 IGKV1-17P01599 117 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 LOXP28300 417 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-201ENST00000331920 NHSL1Q5SYE7 1610 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 MALRD1Q5VYJ5 2156 aa12.8□□□□□ -0.36
PTCH1-201ENST00000331920 VWCEQ96DN2 955 aa12.79□□□□□ -0.36
PTCH1-201ENST00000331920 G3V4G9 280 aa12.79□□□□□ -0.36
PTCH1-201ENST00000331920 PRR14LQ5THK1 2151 aa12.79□□□□□ -0.36
PTCH1-201ENST00000331920 TMEM131Q92545 1883 aa12.79□□□□□ -0.36
PTCH1-201ENST00000331920 ZNF747Q9BV97 191 aa12.79□□□□□ -0.36
PTCH1-201ENST00000331920 PLXNB3Q9ULL4 1909 aa12.79□□□□□ -0.36
PTCH1-201ENST00000331920 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
PTCH1-201ENST00000331920 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-201ENST00000331920 FNDC1Q4ZHG4 1894 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-201ENST00000331920 Q6ZUT4 128 aa12.78□□□□□ -0.36
PTCH1-201ENST00000331920 IGHV4-61A0A0C4DH41 118 aa12.78□□□□□ -0.36
PTCH1-201ENST00000331920 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
PTCH1-201ENST00000331920 LOXL1Q08397 574 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-201ENST00000331920 LINC01545Q5VT33 79 aa12.78□□□□□ -0.36
PTCH1-201ENST00000331920 C20orf197Q8N268 126 aa12.78□□□□□ -0.36
PTCH1-201ENST00000331920 Q8N9W7 124 aa12.78□□□□□ -0.36
PTCH1-201ENST00000331920 EML5Q05BV3 1969 aa12.78□□□□□ -0.36
PTCH1-201ENST00000331920 IGHV4-38-2P0DP08 117 aa12.77□□□□□ -0.36
PTCH1-201ENST00000331920 HIST2H2BDQ6DRA6 164 aa12.77□□□□□ -0.36
PTCH1-201ENST00000331920 UBE2D1P51668 147 aa12.77□□□□□ -0.36
PTCH1-201ENST00000331920 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.37
PTCH1-201ENST00000331920 K7EM74 188 aa12.77□□□□□ -0.37
PTCH1-201ENST00000331920 FAM19A1Q7Z5A9 133 aa12.77□□□□□ -0.37
PTCH1-201ENST00000331920 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
PTCH1-201ENST00000331920 COL18A1P39060 1754 aa12.77□□□□□ -0.37
PTCH1-201ENST00000331920 NLRC5Q86WI3 1866 aa12.76□□□□□ -0.37
PTCH1-201ENST00000331920 CACNA1HO95180 2353 aa12.75□□□□□ -0.37
PTCH1-201ENST00000331920 ZNF106Q9H2Y7 1883 aaKnown RBP12.75□□□□□ -0.37
PTCH1-201ENST00000331920 Q6ZS92 163 aa12.75□□□□□ -0.37
PTCH1-201ENST00000331920 B3GALT5-AS1P59052 145 aa12.75□□□□□ -0.37
PTCH1-201ENST00000331920 Q8N1Y9 231 aa12.75□□□□□ -0.37
PTCH1-201ENST00000331920 KIR2DL5BQ8NHK3 375 aa12.75□□□□□ -0.37
PTCH1-201ENST00000331920 PLXNA2O75051 1894 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 FXYD2P54710 66 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 FAM236DA0A1B0GTK5 79 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 FAM236CP0DP71 79 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 LINC00173Q6ZV60 143 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 ZSWIM8A7E2V4 1837 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 ENHOQ6UWT2 76 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 C9orf85Q96MD7 179 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-201ENST00000331920 PIK3CD-AS1Q5SR53 167 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
PTCH1-201ENST00000331920 K7ENP7 123 aa12.73□□□□□ -0.37
PTCH1-201ENST00000331920 X6R8D5 127 aa12.73□□□□□ -0.37
PTCH1-201ENST00000331920 Q6ZS49 121 aa12.73□□□□□ -0.37
PTCH1-201ENST00000331920 UBE2D3P61077 147 aa12.73□□□□□ -0.37
PTCH1-201ENST00000331920 SNURFQ9Y675 71 aa12.72□□□□□ -0.37
PTCH1-201ENST00000331920 C3orf84H3BNL1 204 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms