RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 DEFB125Q8N687 156 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 TNRC18O15417 2968 aaPredicted RBP7.26□□□□□ -1.25
SS18L1-201ENST00000331758 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 MYCNOSP40205 109 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 Q6YL49 198 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 TRPT1Q86TN4 253 aaKnown RBP7.26□□□□□ -1.25
SS18L1-201ENST00000331758 LRRC75A-AS1Q8N1F1 130 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 SMAD5-AS1Q9Y6J3 95 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 DNAJC9-AS1A6NH13 148 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 K7EP13 123 aa7.26□□□□□ -1.25
SS18L1-201ENST00000331758 GDF5OSQ5U4N7 250 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 C3orf56Q8N813 242 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 CITED2Q99967 270 aaPredicted RBP7.25□□□□□ -1.25
SS18L1-201ENST00000331758 ZNF747Q9BV97 191 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE7O76087 117 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 MBD6Q96DN6 1003 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 C9orf118A6NHY6 69 aa7.25□□□□□ -1.25
SS18L1-201ENST00000331758 RPL39LQ96EH5 51 aaKnown RBP7.25□□□□□ -1.25
SS18L1-201ENST00000331758 TRBV6-1A0A0K0K1D8 114 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 PLNP26678 52 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 DLX4Q92988 240 aaPredicted RBP7.24□□□□□ -1.25
SS18L1-201ENST00000331758 SPAG8Q99932 426 aaPredicted RBP7.24□□□□□ -1.25
SS18L1-201ENST00000331758 TMEM89A2RUT3 159 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 A8MWV9 139 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 AZU1P20160 251 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 CTRLP40313 264 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 KIR3DS1Q14943 382 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE13Q4V321 117 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 SIGMAR1Q99720 223 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE12JA6NER3 117 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 RHODO00212 210 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 CRIP1P50238 77 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE4Q13068 117 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 GAGE5Q13069 117 aa7.24□□□□□ -1.25
SS18L1-201ENST00000331758 ADARB2-AS1A8MUL3 147 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 DNAL4O96015 105 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 PRADC1Q9BSG0 188 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 DKK2Q9UBU2 259 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 FREM2Q5SZK8 3169 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 A0A1B0GXF2 115 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 Q8N1Y9 231 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 TP53TG3Q9ULZ0 132 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 ZNRF2Q8NHG8 242 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 TRAV13-1A0A0B4J241 112 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 MRGPRG-AS1Q2M3A8 158 aa7.23□□□□□ -1.25
SS18L1-201ENST00000331758 TRAV2A0A0B4J234 112 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 TRAV8-2A0A0B4J237 113 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 IGLV2-11P01706 119 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 GTSF1LQ9H1H1 148 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 SPXQ9BT56 116 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 A0A0J9YX75 114 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 SCGB1A1P11684 91 aa7.22□□□□□ -1.25
SS18L1-201ENST00000331758 I3L3M4 83 aa7.21□□□□□ -1.25
SS18L1-201ENST00000331758 K7EP34 96 aa7.21□□□□□ -1.25
SS18L1-201ENST00000331758 C20orf78Q9BR46 151 aa7.21□□□□□ -1.25
SS18L1-201ENST00000331758 JPT2Q9H910 190 aa7.21□□□□□ -1.25
SS18L1-201ENST00000331758 K7EMI3 77 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 U3KQE9 123 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 VWC2LB2RUY7 222 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 Q6ZSV7 163 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 MDFICQ9P1T7 246 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 M0R2P5 195 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 PSMB8P28062 276 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 SCRT2Q9NQ03 307 aa7.21□□□□□ -1.26
SS18L1-201ENST00000331758 A0A087WX48 190 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 SPATA12Q7Z6I5 190 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 C4orf3Q8WVX3 66 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 CHAC1Q9BUX1 264 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
SS18L1-201ENST00000331758 BOD1L1Q8NFC6 3051 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
SS18L1-201ENST00000331758 TSPAN13O95857 204 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 TAL2Q16559 108 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 ADAMTSL5Q6ZMM2 481 aa7.2□□□□□ -1.26
SS18L1-201ENST00000331758 PMVKQ15126 192 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 RNASE13Q5GAN3 156 aaKnown RBP7.19□□□□□ -1.26
SS18L1-201ENST00000331758 ZNF493Q6ZR52 646 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 PIFOQ8TCI5 191 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 F8VRH5 84 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 SUMO4Q6EEV6 95 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 TMEM86BQ8N661 226 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 CLPSL1A2RUU4 121 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 K7EQG2 157 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 NPC2P61916 151 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
SS18L1-201ENST00000331758 C10orf126Q8N4M7 172 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 ZNF702PQ9H963 129 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 RNASE1P07998 156 aaKnown RBP7.19□□□□□ -1.26
SS18L1-201ENST00000331758 IGLC6P0CF74 106 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 DEFB121Q5J5C9 76 aa7.19□□□□□ -1.26
SS18L1-201ENST00000331758 C18orf65Q6ZTR6 163 aa7.18□□□□□ -1.26
SS18L1-201ENST00000331758 BOD1L2Q8IYS8 172 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms