RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 FANCD2OSQ96PS1 177 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 PRO1854Q9UHT4 67 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 NBR2O15453 112 aa13.84□□□□□ -0.19
PKP3-201ENST00000331563 NTN5Q8WTR8 489 aaPredicted RBP13.84□□□□□ -0.19
PKP3-201ENST00000331563 IGHV7-4-1A0A0J9YVY3 117 aa13.84□□□□□ -0.19
PKP3-201ENST00000331563 DEFB104AQ8WTQ1 72 aa13.84□□□□□ -0.19
PKP3-201ENST00000331563 RPL39LQ96EH5 51 aaKnown RBP13.84□□□□□ -0.19
PKP3-201ENST00000331563 PRORYQ9H606 182 aa13.84□□□□□ -0.19
PKP3-201ENST00000331563 A0A0J9YY99 117 aa13.83□□□□□ -0.19
PKP3-201ENST00000331563 WIPF1O43516 503 aa13.83□□□□□ -0.19
PKP3-201ENST00000331563 FBXL19-AS1Q494R0 122 aa13.83□□□□□ -0.19
PKP3-201ENST00000331563 PSMG3-AS1Q96PY0 264 aa13.83□□□□□ -0.19
PKP3-201ENST00000331563 AGPAT4-IT1Q9H0P7 198 aa13.83□□□□□ -0.19
PKP3-201ENST00000331563 LOC107984640A0A0U1RRK4 108 aa13.83□□□□□ -0.2
PKP3-201ENST00000331563 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
PKP3-201ENST00000331563 MGPP08493 103 aa13.83□□□□□ -0.2
PKP3-201ENST00000331563 COX6B1P14854 86 aa13.83□□□□□ -0.2
PKP3-201ENST00000331563 CRIP2P52943 208 aaPredicted RBP13.83□□□□□ -0.2
PKP3-201ENST00000331563 Q6ZS46 218 aa13.83□□□□□ -0.2
PKP3-201ENST00000331563 SLC50A1Q9BRV3 221 aa13.83□□□□□ -0.2
PKP3-201ENST00000331563 ZNF462Q96JM2 2506 aa13.82□□□□□ -0.2
PKP3-201ENST00000331563 DUSP14O95147 198 aaKnown RBP13.82□□□□□ -0.2
PKP3-201ENST00000331563 GNLYP22749 145 aa13.82□□□□□ -0.2
PKP3-201ENST00000331563 IGLV11-55A0A075B6I3 123 aa13.82□□□□□ -0.2
PKP3-201ENST00000331563 TRAV2A0A0B4J234 112 aa13.82□□□□□ -0.2
PKP3-201ENST00000331563 RNF5Q99942 180 aa13.82□□□□□ -0.2
PKP3-201ENST00000331563 Q1RN00 199 aa13.81□□□□□ -0.2
PKP3-201ENST00000331563 LRRK2Q5S007 2527 aa13.81□□□□□ -0.2
PKP3-201ENST00000331563 TMEM170BQ5T4T1 132 aa13.81□□□□□ -0.2
PKP3-201ENST00000331563 POLQO75417 2590 aa13.8□□□□□ -0.2
PKP3-201ENST00000331563 C11orf86A6NJI1 115 aa13.8□□□□□ -0.2
PKP3-201ENST00000331563 CTSGP08311 255 aa13.8□□□□□ -0.2
PKP3-201ENST00000331563 KAAG1Q9UBP8 84 aa13.8□□□□□ -0.2
PKP3-201ENST00000331563 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
PKP3-201ENST00000331563 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
PKP3-201ENST00000331563 C14orf178Q8N769 122 aaPredicted RBP13.8□□□□□ -0.2
PKP3-201ENST00000331563 IGHV3-30P01768 117 aa13.79□□□□□ -0.2
PKP3-201ENST00000331563 IGHV3-30-5P0DP03 117 aa13.79□□□□□ -0.2
PKP3-201ENST00000331563 TIMD4Q96H15 378 aa13.79□□□□□ -0.2
PKP3-201ENST00000331563 TEX49A0A1B0GTD5 131 aa13.79□□□□□ -0.2
PKP3-201ENST00000331563 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
PKP3-201ENST00000331563 IGHV4-39P01824 125 aa13.78□□□□□ -0.2
PKP3-201ENST00000331563 UBTD1Q9HAC8 227 aa13.78□□□□□ -0.2
PKP3-201ENST00000331563 BEX4Q9NWD9 120 aaPredicted RBP13.78□□□□□ -0.2
PKP3-201ENST00000331563 RPL13AP40429 203 aaKnown RBP13.77□□□□□ -0.2
PKP3-201ENST00000331563 MRPL23Q16540 153 aaKnown RBP13.77□□□□□ -0.2
PKP3-201ENST00000331563 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.2
PKP3-201ENST00000331563 RBAKDNA6NC62 111 aa13.77□□□□□ -0.21
PKP3-201ENST00000331563 A4D1N5 150 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 NPFFO15130 113 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 SLC25A29Q8N8R3 303 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 J3KT08 172 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 M0R2P5 195 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 LRRC75A-AS1Q8N1F1 130 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 PHLDA3Q9Y5J5 127 aa13.76□□□□□ -0.21
PKP3-201ENST00000331563 NDUFA7O95182 113 aa13.75□□□□□ -0.21
PKP3-201ENST00000331563 LGALS3P17931 250 aaKnown RBP13.75□□□□□ -0.21
PKP3-201ENST00000331563 NDPQ00604 133 aa13.75□□□□□ -0.21
PKP3-201ENST00000331563 C9orf153Q5TBE3 101 aa13.75□□□□□ -0.21
PKP3-201ENST00000331563 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
PKP3-201ENST00000331563 IGHV4-4A0A075B6R2 117 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 OOSP1A8MZH6 123 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 LGALS9O00182 355 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 TSPEAR-AS2P59090 65 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 PAPPA-AS1Q5QFB9 102 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 TP53TG1Q9Y2A0 90 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 CRYGDP07320 174 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 DPM3Q9P2X0 92 aa13.74□□□□□ -0.21
PKP3-201ENST00000331563 BUB3O43684 328 aa13.73□□□□□ -0.21
PKP3-201ENST00000331563 DOPEY1Q5JWR5 2465 aa13.73□□□□□ -0.21
PKP3-201ENST00000331563 LY6LH3BQJ8 138 aa13.73□□□□□ -0.21
PKP3-201ENST00000331563 ZNF56Q15929 161 aa13.73□□□□□ -0.21
PKP3-201ENST00000331563 ITLN2Q8WWU7 325 aaPredicted RBP13.73□□□□□ -0.21
PKP3-201ENST00000331563 USP9YO00507 2555 aaPredicted RBP13.73□□□□□ -0.21
PKP3-201ENST00000331563 IGLV4-69A0A075B6H9 119 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 ATXN8Q156A1 80 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 TRBV7-7A0A0K0K1E9 115 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 H3BMM0 161 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 UBE2WQ96B02 151 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 J3QQQ9 107 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 IGHV3-33P01772 117 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 HERVK_113P63121 156 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 PMVKQ15126 192 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 C11orf71Q6IPW1 123 aa13.72□□□□□ -0.21
PKP3-201ENST00000331563 LINC01620Q4KN68 170 aa13.71□□□□□ -0.21
PKP3-201ENST00000331563 LINC01600Q96MT4 127 aa13.71□□□□□ -0.22
PKP3-201ENST00000331563 ZANQ9Y493 2812 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 A0A1B0GX51 115 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 RPL39P62891 51 aaKnown RBP13.7□□□□□ -0.22
PKP3-201ENST00000331563 C3orf22Q8N5N4 141 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 NPBQ8NG41 125 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 TMEM101Q96IK0 257 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.7□□□□□ -0.229e-7■■■■□ 25.4
PKP3-201ENST00000331563 IGF1P05019 195 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 C15orf32Q32M92 178 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 PRR9Q5T870 116 aa13.7□□□□□ -0.22
PKP3-201ENST00000331563 IGHV3-64A0A075B6Q5 118 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 FAM236AA0A1B0GUQ0 79 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 FAM236BA0A1B0GV22 79 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms