RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TRBV25-1A0A075B6N4 114 aa10.79□□□□□ -0.68
TPM3-206ENST00000330188 BAALCQ8WXS3 180 aa10.79□□□□□ -0.68
TPM3-206ENST00000330188 CHAC1Q9BUX1 264 aa10.78□□□□□ -0.68
TPM3-206ENST00000330188 MAPKAPK5-AS1Q8N8E1 139 aa10.78□□□□□ -0.68
TPM3-206ENST00000330188 PTPN13Q12923 2485 aa10.77□□□□□ -0.69
TPM3-206ENST00000330188 F5H697 171 aa10.77□□□□□ -0.69
TPM3-206ENST00000330188 SYT8Q8NBV8 401 aa10.77□□□□□ -0.69
TPM3-206ENST00000330188 MXRA5Q9NR99 2828 aa10.77□□□□□ -0.69
TPM3-206ENST00000330188 C9orf118A6NHY6 69 aa10.76□□□□□ -0.69
TPM3-206ENST00000330188 LINC01619G3V211 115 aa10.76□□□□□ -0.69
TPM3-206ENST00000330188 FAM74A4Q5TZK3 123 aa10.76□□□□□ -0.69
TPM3-206ENST00000330188 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
TPM3-206ENST00000330188 ZFP2Q6ZN57 461 aa10.76□□□□□ -0.69
TPM3-206ENST00000330188 CYSLTR1Q9Y271 337 aa10.76□□□□□ -0.69
TPM3-206ENST00000330188 TRBV6-5A0A0K0K1A5 114 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 KNCNA6PVL3 124 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 VCYO14598 125 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 CRYGDP07320 174 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
TPM3-206ENST00000330188 OR11H1Q8NG94 326 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 TP53TG1Q9Y2A0 90 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 SDHAF1A6NFY7 115 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 K7EP13 123 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 RBMY1A1P0DJD3 496 aaKnown RBP10.75□□□□□ -0.69
TPM3-206ENST00000330188 RBMY1CP0DJD4 496 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 GCSHP23434 173 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 FXYD2P54710 66 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 RBMY1FQ15415 496 aaKnown RBP10.75□□□□□ -0.69
TPM3-206ENST00000330188 C4orf3Q8WVX3 66 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 JMJD8Q96S16 334 aa10.75□□□□□ -0.69
TPM3-206ENST00000330188 TRBV27A0A0K0K1C4 114 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 A8MTW9 85 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 TSHBP01222 138 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 FOSL1P15407 271 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 DEFB131AP59861 70 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 DEFB104AQ8WTQ1 72 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 KIR2DL4Q99706 377 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 CENPEQ02224 2701 aa10.74□□□□□ -0.69
TPM3-206ENST00000330188 ZNF469Q96JG9 3925 aaPredicted RBP10.74□□□□□ -0.69
TPM3-206ENST00000330188 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 LINC01549A6NIU2 74 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 M0QY20 66 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 RIPPLY3P57055 190 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 ZNF56Q15929 161 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 SORL1Q92673 2214 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 NAV2Q8IVL1 2488 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 H3BUT2 72 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 RAB37Q96AX2 223 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
TPM3-206ENST00000330188 TRAV2A0A0B4J234 112 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 RPL39P62891 51 aaKnown RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 TMEM61Q8N0U2 210 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 CEND1Q8N111 149 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 TEX15Q9BXT5 2789 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 RBMY1BA6NDE4 496 aaKnown RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 RBMY1EA6NEQ0 496 aaKnown RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 H3BMM0 161 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 RBMY1DP0C7P1 496 aaKnown RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 KHDC1LQ5JSQ8 128 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 OR11H2Q8NH07 326 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 RNASE8Q8TDE3 154 aaKnown RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 DLX4Q92988 240 aaPredicted RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 TM2D2Q9BX73 214 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 ZNF256Q9Y2P7 627 aaPredicted RBP10.72□□□□□ -0.69
TPM3-206ENST00000330188 ABCA12Q86UK0 2595 aa10.72□□□□□ -0.69
TPM3-206ENST00000330188 SMIM13P0DJ93 91 aa10.71□□□□□ -0.69
TPM3-206ENST00000330188 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.69
TPM3-206ENST00000330188 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
TPM3-206ENST00000330188 E9PLD3 99 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 UFSP1Q6NVU6 142 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 KLHL30-AS1Q8NEE0 82 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 TIMM17AQ99595 171 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 CREBBPQ92793 2442 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 IGLV4-69A0A075B6H9 119 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 MYMXA0A1B0GTQ4 84 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 GAGE10A6NGK3 116 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 TAL2Q16559 108 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 Q6ZSV7 163 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 WFDC11Q8NEX6 87 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 TMEM141Q96I45 108 aa10.7□□□□□ -0.7
TPM3-206ENST00000330188 PMVKQ15126 192 aa10.69□□□□□ -0.7
TPM3-206ENST00000330188 PRADC1Q9BSG0 188 aa10.69□□□□□ -0.7
TPM3-206ENST00000330188 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
TPM3-206ENST00000330188 NSUN5P1Q3KNT7 163 aa10.69□□□□□ -0.7
TPM3-206ENST00000330188 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
TPM3-206ENST00000330188 PHLDA1Q8WV24 401 aaPredicted RBP10.69□□□□□ -0.7
TPM3-206ENST00000330188 MAP6D1Q9H9H5 199 aa10.69□□□□□ -0.7
TPM3-206ENST00000330188 NBPF19A0A087WUL8 3843 aa10.68□□□□□ -0.7
TPM3-206ENST00000330188 A0A1W2PPM0 123 aa10.68□□□□□ -0.7
TPM3-206ENST00000330188 RHOHQ15669 191 aa10.68□□□□□ -0.7
TPM3-206ENST00000330188 GTF2H5Q6ZYL4 71 aa10.68□□□□□ -0.7
TPM3-206ENST00000330188 CST9LQ9H4G1 147 aa10.68□□□□□ -0.7
TPM3-206ENST00000330188 AKAP9Q99996 3911 aa10.68□□□□□ -0.7
TPM3-206ENST00000330188 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms