RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CNFNQ9BYD5 112 aa4.72□□□□□ -1.65
CSTF3-201ENST00000323959 PSG8Q9UQ74 426 aa4.72□□□□□ -1.65
CSTF3-201ENST00000323959 TRAV25A0A0B4J276 109 aa4.71□□□□□ -1.65
CSTF3-201ENST00000323959 A0A1B0GXF2 115 aa4.71□□□□□ -1.65
CSTF3-201ENST00000323959 HLA-DMBP28068 263 aa4.71□□□□□ -1.65
CSTF3-201ENST00000323959 OR8I2Q8N0Y5 310 aa4.71□□□□□ -1.65
CSTF3-201ENST00000323959 RPP21Q9H633 154 aaKnown RBP4.71□□□□□ -1.65
CSTF3-201ENST00000323959 CRISP2P16562 243 aa4.71□□□□□ -1.66
CSTF3-201ENST00000323959 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
CSTF3-201ENST00000323959 LINC00477Q96M19 166 aa4.71□□□□□ -1.66
CSTF3-201ENST00000323959 CST9LQ9H4G1 147 aa4.71□□□□□ -1.66
CSTF3-201ENST00000323959 NAT8BQ9UHF3 227 aa4.71□□□□□ -1.66
CSTF3-201ENST00000323959 MRPS16Q9Y3D3 137 aaKnown RBP4.71□□□□□ -1.66
CSTF3-201ENST00000323959 A8MWL6 223 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 HIST1H1AQ02539 215 aaPredicted RBP4.7□□□□□ -1.66
CSTF3-201ENST00000323959 LINC01559Q495D7 138 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 BLNKQ8WV28 456 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 NRN1Q9NPD7 142 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 TP53TG3Q9ULZ0 132 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 TRAPPC1Q9Y5R8 145 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 TMEM213A2RRL7 107 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 CTRLP40313 264 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 CD300EQ496F6 205 aaPredicted RBP4.7□□□□□ -1.66
CSTF3-201ENST00000323959 TMEM256Q8N2U0 113 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 DCANP1Q8TF63 244 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 NACAE9PAV3 2078 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 DEFB131BA0A096LNP1 70 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 A6NJY4 79 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 TRBV12-3P01733 135 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 IGHV3-23P01764 117 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 HLA-DQA1P01909 254 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 APOHP02749 345 aaPredicted RBP4.7□□□□□ -1.66
CSTF3-201ENST00000323959 MT1HL1P0DM35 61 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 IGLC3P0DOY3 106 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 GNG5P63218 68 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 TDRG1Q3Y452 100 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 PET117Q6UWS5 81 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 UNQ9165/PRO28630Q6UXU0 137 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 Q6ZN92 141 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 ZNF493Q6ZR52 646 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 EXOC3-AS1Q8N2X6 119 aa4.7□□□□□ -1.66
CSTF3-201ENST00000323959 DNAH8Q96JB1 4490 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 ID1P41134 155 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 Q0VG73 95 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 FAM162BQ5T6X4 162 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 Q6ZTC4 211 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 GOLT1AQ6ZVE7 132 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 DYNLRB2Q8TF09 96 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 LINC00467Q9BRT7 94 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 ZNF138P52744 262 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 VAMP3Q15836 100 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 SPATA45Q537H7 98 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 TTC32Q5I0X7 151 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 PRR27Q6MZM9 219 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 LINC00528Q8N1L1 170 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 ZC2HC1AQ96GY0 325 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 NDFIP1Q9BT67 221 aa4.69□□□□□ -1.66
CSTF3-201ENST00000323959 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 K7EQG2 157 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 P01737 135 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 IGLC6P0CF74 106 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 DEFB114Q30KQ6 69 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 OR10J3Q5JRS4 329 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 TMEM136Q6ZRR5 245 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 RBPMS2Q6ZRY4 209 aaKnown RBP4.68□□□□□ -1.66
CSTF3-201ENST00000323959 TCF24Q7RTU0 167 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 LINC00479Q96M42 142 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 SSBP4Q9BWG4 385 aaPredicted RBP4.68□□□□□ -1.66
CSTF3-201ENST00000323959 RHPN1-AS1Q9BWJ2 59 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 S4R3C0 116 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 NUPR1O60356 82 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 CRIP1P50238 77 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 CMC4P56277 68 aaPredicted RBP4.68□□□□□ -1.66
CSTF3-201ENST00000323959 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 OR11H2Q8NH07 326 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 PTH2Q96A98 100 aa4.68□□□□□ -1.66
CSTF3-201ENST00000323959 RNASE7Q9H1E1 156 aaKnown RBP4.68□□□□□ -1.66
CSTF3-201ENST00000323959 C2orf70A6NJV1 201 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 TSPOP30536 169 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 NUP35Q8NFH5 326 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 TRAV34A0A0B4J273 112 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 KLLNB2CW77 178 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 F2Z2F3 143 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 SNAI2O43623 268 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 CT45A10P0DMU9 189 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 SCGB1A1P11684 91 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 GCSHP23434 173 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 NIT1Q86X76 327 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 NHLRC2Q8NBF2 726 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 SAMD10Q9BYL1 202 aa4.67□□□□□ -1.66
CSTF3-201ENST00000323959 LINC01546A6NGU7 62 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 FABP5P3A8MUU1 101 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 NXPH4O95158 308 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 CBLN1P23435 193 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 SYNJ2BPP57105 145 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 PIK3CD-AS1Q5SR53 167 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 PRNTQ86SH4 94 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 DAZAP1Q96EP5 407 aaKnown RBP4.66□□□□□ -1.66
CSTF3-201ENST00000323959 AGPAT4-IT1Q9H0P7 198 aa4.66□□□□□ -1.66
CSTF3-201ENST00000323959 M0R3E3 92 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms