RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NHP2Q9NX24 153 aaKnown RBP9.3□□□□□ -0.92
RNF4-201ENST00000314289 SRSF2Q01130 221 aaKnown RBP9.3□□□□□ -0.92
RNF4-201ENST00000314289 UBE2E2Q96LR5 201 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 CNFNQ9BYD5 112 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 TRAV21A0A0B4J279 112 aa9.29□□□□□ -0.92
RNF4-201ENST00000314289 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
RNF4-201ENST00000314289 MAP1LC3AQ9H492 121 aa9.29□□□□□ -0.92
RNF4-201ENST00000314289 ESM1Q9NQ30 184 aa9.29□□□□□ -0.92
RNF4-201ENST00000314289 TNFRSF6BO95407 300 aa9.29□□□□□ -0.92
RNF4-201ENST00000314289 FOXC2Q99958 501 aa9.29□□□□□ -0.92
RNF4-201ENST00000314289 GTSF1LQ9H1H1 148 aa9.29□□□□□ -0.92
RNF4-201ENST00000314289 DNAJC9-AS1A6NH13 148 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 ID1P41134 155 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 C14orf178Q8N769 122 aaPredicted RBP9.28□□□□□ -0.92
RNF4-201ENST00000314289 SMR3AQ99954 134 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 YAE1D1Q9NRH1 226 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 OTOGQ6ZRI0 2925 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 FN1P02751 2386 aaKnown RBP9.28□□□□□ -0.92
RNF4-201ENST00000314289 SAMD13Q5VXD3 122 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 ODF1Q14990 250 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 SPINK13Q1W4C9 94 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
RNF4-201ENST00000314289 ANK3Q12955 4377 aaKnown RBP9.27□□□□□ -0.93
RNF4-201ENST00000314289 Q6ZSV7 163 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 MTURNQ8N3F0 131 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 KLHL30-AS1Q8NEE0 82 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 MYOZ3Q8TDC0 251 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 TMEM160Q9NX00 188 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 HTN1P15515 57 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 ASIPP42127 132 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 SMAGPQ0VAQ4 97 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 ZC2HC1BQ5TFG8 222 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 FAM19A4Q96LR4 140 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 JPT2Q9H910 190 aa9.27□□□□□ -0.93
RNF4-201ENST00000314289 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
RNF4-201ENST00000314289 IGKCP01834 107 aa9.26□□□□□ -0.93
RNF4-201ENST00000314289 SNRPD3P62318 126 aaKnown RBP9.26□□□□□ -0.93
RNF4-201ENST00000314289 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
RNF4-201ENST00000314289 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
RNF4-201ENST00000314289 TMEM89A2RUT3 159 aa9.26□□□□□ -0.93
RNF4-201ENST00000314289 MGPP08493 103 aa9.26□□□□□ -0.93
RNF4-201ENST00000314289 FCER1GP30273 86 aa9.26□□□□□ -0.93
RNF4-201ENST00000314289 KNCNA6PVL3 124 aa9.25□□□□□ -0.93
RNF4-201ENST00000314289 K7EQG2 157 aa9.25□□□□□ -0.93
RNF4-201ENST00000314289 PRM2P04554 102 aa9.25□□□□□ -0.93
RNF4-201ENST00000314289 CD7P09564 240 aa9.25□□□□□ -0.93
RNF4-201ENST00000314289 RNASE3P12724 160 aaKnown RBP9.25□□□□□ -0.93
RNF4-201ENST00000314289 DLX4Q92988 240 aaPredicted RBP9.25□□□□□ -0.93
RNF4-201ENST00000314289 HHLA3Q9XRX5 114 aa9.25□□□□□ -0.93
RNF4-201ENST00000314289 AZU1P20160 251 aa9.25□□□□□ -0.93
RNF4-201ENST00000314289 KRTAP1-1Q07627 177 aa9.25□□□□□ -0.93
RNF4-201ENST00000314289 WFDC2Q14508 124 aa9.24□□□□□ -0.93
RNF4-201ENST00000314289 FAM159AQ6UWV7 190 aa9.24□□□□□ -0.93
RNF4-201ENST00000314289 RPL39LQ96EH5 51 aaKnown RBP9.24□□□□□ -0.93
RNF4-201ENST00000314289 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
RNF4-201ENST00000314289 A0A0J9YX75 114 aa9.24□□□□□ -0.93
RNF4-201ENST00000314289 SMIM17P0DL12 118 aa9.24□□□□□ -0.93
RNF4-201ENST00000314289 AMTNQ6UX39 209 aa9.24□□□□□ -0.93
RNF4-201ENST00000314289 KLLNB2CW77 178 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 LINC01619G3V211 115 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 DPM2O94777 84 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 TMEM61Q8N0U2 210 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 CEND1Q8N111 149 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 Q8N2B8 174 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 A0A087WWL8 130 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 H3BMG7 143 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 DEFB131AP59861 70 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 MRPL35Q9NZE8 188 aaKnown RBP9.23□□□□□ -0.93
RNF4-201ENST00000314289 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 LGALS9O00182 355 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 RNF152Q8N8N0 203 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 NRACQ8N912 160 aa9.23□□□□□ -0.93
RNF4-201ENST00000314289 NXT2Q9NPJ8 142 aaKnown RBP9.23□□□□□ -0.93
RNF4-201ENST00000314289 CIDEAO60543 219 aa9.22□□□□□ -0.93
RNF4-201ENST00000314289 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
RNF4-201ENST00000314289 PHLDA1Q8WV24 401 aaPredicted RBP9.22□□□□□ -0.93
RNF4-201ENST00000314289 ZNF479Q96JC4 524 aa9.22□□□□□ -0.93
RNF4-201ENST00000314289 HIGD1BQ9P298 99 aa9.22□□□□□ -0.93
RNF4-201ENST00000314289 CD28P10747 220 aa9.22□□□□□ -0.93
RNF4-201ENST00000314289 ETDBQ3ZM63 59 aa9.22□□□□□ -0.93
RNF4-201ENST00000314289 APRG1Q8IVJ8 170 aa9.22□□□□□ -0.93
RNF4-201ENST00000314289 FAM74A4Q5TZK3 123 aa9.21□□□□□ -0.93
RNF4-201ENST00000314289 SIGMAR1Q99720 223 aa9.21□□□□□ -0.93
RNF4-201ENST00000314289 ZMAT4Q9H898 229 aa9.21□□□□□ -0.93
RNF4-201ENST00000314289 HIST1H4GQ99525 98 aa9.21□□□□□ -0.94
RNF4-201ENST00000314289 IGLL5B9A064 214 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 IGHV4-4A0A075B6R2 117 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 Q8N1Y9 231 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 C4orf3Q8WVX3 66 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 FLNBO75369 2602 aaKnown RBP9.2□□□□□ -0.94
RNF4-201ENST00000314289 NACAE9PAV3 2078 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.2□□□□□ -0.94
RNF4-201ENST00000314289 ATP5LO75964 103 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 DYNLRB2Q8TF09 96 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 RASL10AQ92737 203 aa9.2□□□□□ -0.94
RNF4-201ENST00000314289 IGLV2-18A0A075B6J9 118 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
RNF4-201ENST00000314289 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms