RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 A0A087WWL8 130 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 PCP4L1A6NKN8 68 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 M0R2P5 195 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 BTF3P20290 206 aaKnown RBP12.18□□□□□ -0.46
CLCF1-201ENST00000312438 RASL10AQ92737 203 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 C20orf78Q9BR46 151 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 SPXQ9BT56 116 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 C1QTNF4Q9BXJ3 329 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 HSPB8Q9UJY1 196 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 CRYGDP07320 174 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 C11orf72Q8NBR9 251 aa12.18□□□□□ -0.46
CLCF1-201ENST00000312438 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
CLCF1-201ENST00000312438 F5H697 171 aa12.17□□□□□ -0.46
CLCF1-201ENST00000312438 GIG44P09565 113 aaPredicted RBP12.17□□□□□ -0.46
CLCF1-201ENST00000312438 RPL35AP18077 110 aaKnown RBP12.17□□□□□ -0.46
CLCF1-201ENST00000312438 BAHCC1Q9P281 2608 aa12.17□□□□□ -0.46
CLCF1-201ENST00000312438 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
CLCF1-201ENST00000312438 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
CLCF1-201ENST00000312438 ZNF747Q9BV97 191 aa12.16□□□□□ -0.46
CLCF1-201ENST00000312438 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
CLCF1-201ENST00000312438 FAM74A4Q5TZK3 123 aa12.16□□□□□ -0.46
CLCF1-201ENST00000312438 Q8N976 141 aa12.16□□□□□ -0.46
CLCF1-201ENST00000312438 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
CLCF1-201ENST00000312438 A0A096LNJ9 63 aa12.15□□□□□ -0.46
CLCF1-201ENST00000312438 HBDP02042 147 aa12.15□□□□□ -0.46
CLCF1-201ENST00000312438 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
CLCF1-201ENST00000312438 RPL39LQ96EH5 51 aaKnown RBP12.15□□□□□ -0.46
CLCF1-201ENST00000312438 MAP1LC3CQ9BXW4 147 aa12.15□□□□□ -0.46
CLCF1-201ENST00000312438 MUC4Q99102 2169 aa12.15□□□□□ -0.46
CLCF1-201ENST00000312438 A8MWV9 139 aa12.14□□□□□ -0.47
CLCF1-201ENST00000312438 AZU1P20160 251 aa12.14□□□□□ -0.47
CLCF1-201ENST00000312438 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
CLCF1-201ENST00000312438 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
CLCF1-201ENST00000312438 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
CLCF1-201ENST00000312438 SYS1-DBNDD2H3BUS1 97 aa12.14□□□□□ -0.47
CLCF1-201ENST00000312438 FCER1GP30273 86 aa12.14□□□□□ -0.47
CLCF1-201ENST00000312438 LAGE3Q14657 143 aa12.13□□□□□ -0.47
CLCF1-201ENST00000312438 ZNF56Q15929 161 aa12.13□□□□□ -0.47
CLCF1-201ENST00000312438 TEX43Q6ZNM6 134 aa12.13□□□□□ -0.47
CLCF1-201ENST00000312438 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
CLCF1-201ENST00000312438 NDUFAF3Q9BU61 184 aa12.13□□□□□ -0.47
CLCF1-201ENST00000312438 K7EMI3 77 aa12.12□□□□□ -0.47
CLCF1-201ENST00000312438 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
CLCF1-201ENST00000312438 RNASE8Q8TDE3 154 aaKnown RBP12.12□□□□□ -0.47
CLCF1-201ENST00000312438 CSTL1Q9H114 145 aa12.12□□□□□ -0.47
CLCF1-201ENST00000312438 ST20Q9HBF5 79 aa12.12□□□□□ -0.47
CLCF1-201ENST00000312438 WIPF1O43516 503 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 IGLL1P15814 213 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 PKIAP61925 76 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
CLCF1-201ENST00000312438 PET117Q6UWS5 81 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 ZNF664Q8N3J9 261 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
CLCF1-201ENST00000312438 M0QY20 66 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 TCAPO15273 167 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
CLCF1-201ENST00000312438 TRBV6-5A0A0K0K1A5 114 aa12.1□□□□□ -0.47
CLCF1-201ENST00000312438 ORMDL2Q53FV1 153 aa12.1□□□□□ -0.47
CLCF1-201ENST00000312438 SHISA2Q6UWI4 295 aa12.1□□□□□ -0.47
CLCF1-201ENST00000312438 SPATA12Q7Z6I5 190 aa12.1□□□□□ -0.47
CLCF1-201ENST00000312438 NIPBLQ6KC79 2804 aaeCLIP12.1□□□□□ -0.47
CLCF1-201ENST00000312438 C20orf202A1L168 122 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
CLCF1-201ENST00000312438 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 ZNF705AQ6ZN79 300 aaPredicted RBP12.09□□□□□ -0.47
CLCF1-201ENST00000312438 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 TMEM158Q8WZ71 300 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 TSTD3H0UI37 97 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 H7C1H1 209 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 VCYO14598 125 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 CFAP126Q5VTH2 177 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
CLCF1-201ENST00000312438 MRPL16Q9NX20 251 aaKnown RBP12.09□□□□□ -0.47
CLCF1-201ENST00000312438 RHODO00212 210 aa12.08□□□□□ -0.48
CLCF1-201ENST00000312438 C12orf54Q6X4T0 127 aa12.08□□□□□ -0.48
CLCF1-201ENST00000312438 IFI27L1Q96BM0 104 aa12.08□□□□□ -0.48
CLCF1-201ENST00000312438 C16orf74Q96GX8 76 aa12.08□□□□□ -0.48
CLCF1-201ENST00000312438 RS1O15537 224 aa12.07□□□□□ -0.48
CLCF1-201ENST00000312438 DAZ2Q13117 558 aaKnown RBP12.07□□□□□ -0.48
CLCF1-201ENST00000312438 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
CLCF1-201ENST00000312438 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
CLCF1-201ENST00000312438 VAMP8Q9BV40 100 aa12.07□□□□□ -0.48
CLCF1-201ENST00000312438 NUDT3O95989 172 aa12.07□□□□□ -0.48
CLCF1-201ENST00000312438 PRO1933Q9H354 126 aa12.07□□□□□ -0.48
CLCF1-201ENST00000312438 ATRQ13535 2644 aa12.06□□□□□ -0.48
CLCF1-201ENST00000312438 TEP1Q99973 2627 aaKnown RBP12.06□□□□□ -0.48
CLCF1-201ENST00000312438 TRGV1A0A0A0MS02 117 aa12.06□□□□□ -0.48
CLCF1-201ENST00000312438 IGHV3-73A0A0B4J1V6 119 aa12.06□□□□□ -0.48
CLCF1-201ENST00000312438 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
CLCF1-201ENST00000312438 KIR2DL4Q99706 377 aa12.06□□□□□ -0.48
CLCF1-201ENST00000312438 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
CLCF1-201ENST00000312438 H0Y8G0 127 aa12.05□□□□□ -0.48
CLCF1-201ENST00000312438 LINC01545Q5VT33 79 aa12.05□□□□□ -0.48
CLCF1-201ENST00000312438 ZFP2Q6ZN57 461 aa12.05□□□□□ -0.48
CLCF1-201ENST00000312438 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
CLCF1-201ENST00000312438 ATP5LO75964 103 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 G0S2P27469 103 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 KIR2DL5BA0A0G2JN68 375 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 KIR2DL5BA0A0G2JPC4 375 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 ATOH7Q8N100 152 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms