RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ZFAND3Q9H8U3 227 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 PRSS29PA6NIE9 313 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 TRBV25-1A0A075B6N4 114 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 IGHV4-31P0DP07 118 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 Q8N1Y9 231 aa8.71□□□□□ -1.01
PCDHGC3-201ENST00000308177 PGPEP1Q9NXJ5 209 aa8.71□□□□□ -1.01
PCDHGC3-201ENST00000308177 CKS1BP61024 79 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 SUMO4Q6EEV6 95 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 TMEM86BQ8N661 226 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 RHOHQ15669 191 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 TMEM61Q8N0U2 210 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 JMJD1CQ15652 2540 aa8.71□□□□□ -1.02
PCDHGC3-201ENST00000308177 RNF152Q8N8N0 203 aa8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 TMEM243Q9BU79 118 aa8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 C11orf68Q9H3H3 251 aaKnown RBP8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 TRANK1O15050 2925 aa8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 A0A0J9YX75 114 aa8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 DAD1P61803 113 aa8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 A0A1W2PPR1 153 aa8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 Q6YL49 198 aa8.7□□□□□ -1.02
PCDHGC3-201ENST00000308177 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 ZNF462Q96JM2 2506 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 C4orf3Q8WVX3 66 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 F5H768 121 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 APOC4P55056 127 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 BVES-AS1Q5T3Y7 98 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 WFDC11Q8NEX6 87 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 ADAMTSL5Q6ZMM2 481 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 PCP2Q8IVA1 136 aa8.69□□□□□ -1.02
PCDHGC3-201ENST00000308177 SS18Q15532 418 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 SMAD5-AS1Q9Y6J3 95 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 DOPEY1Q5JWR5 2465 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 DNAJC9-AS1A6NH13 148 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 SIVA1O15304 175 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 PAX4O43316 350 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 ANKRD39Q53RE8 183 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 DEFB121Q5J5C9 76 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 DLX4Q92988 240 aaPredicted RBP8.68□□□□□ -1.02
PCDHGC3-201ENST00000308177 TRAV25A0A0B4J276 109 aa8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 J3QQQ9 107 aa8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 GAGE6Q13070 117 aa8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 RNASE13Q5GAN3 156 aaKnown RBP8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 CITED2Q99967 270 aaPredicted RBP8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 CRIP1P50238 77 aa8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
PCDHGC3-201ENST00000308177 TRAV8-2A0A0B4J237 113 aa8.66□□□□□ -1.02
PCDHGC3-201ENST00000308177 VWC2LB2RUY7 222 aa8.66□□□□□ -1.02
PCDHGC3-201ENST00000308177 IGLV2-11P01706 119 aa8.66□□□□□ -1.02
PCDHGC3-201ENST00000308177 PKD1L2Q7Z442 2459 aa8.66□□□□□ -1.02
PCDHGC3-201ENST00000308177 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
PCDHGC3-201ENST00000308177 MDFICQ9P1T7 246 aa8.66□□□□□ -1.02
PCDHGC3-201ENST00000308177 C10orf99Q6UWK7 81 aa8.65□□□□□ -1.02
PCDHGC3-201ENST00000308177 DPH3Q96FX2 82 aa8.65□□□□□ -1.02
PCDHGC3-201ENST00000308177 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
PCDHGC3-201ENST00000308177 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
PCDHGC3-201ENST00000308177 TAL2Q16559 108 aa8.65□□□□□ -1.02
PCDHGC3-201ENST00000308177 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
PCDHGC3-201ENST00000308177 A0A1B0GV72 72 aa8.65□□□□□ -1.03
PCDHGC3-201ENST00000308177 K7EQG2 157 aa8.65□□□□□ -1.03
PCDHGC3-201ENST00000308177 EPG5Q9HCE0 2579 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 CLPSL1A2RUU4 121 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 LGALS9O00182 355 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 LEPROTO15243 131 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 JPT2Q9H910 190 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 LAMA2P24043 3122 aaKnown RBP8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 CEND1Q8N111 149 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 POLQO75417 2590 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 ATXN8Q156A1 80 aa8.64□□□□□ -1.03
PCDHGC3-201ENST00000308177 C9orf66Q5T8R8 295 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 TNRC6BQ9UPQ9 1833 aaKnown RBP8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 NPSP0C0P6 89 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 HERVK_113P63121 156 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 GATD1Q8NB37 220 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 FN1P02751 2386 aaKnown RBP8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 S100A7L2Q5SY68 101 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 SPANXA1Q9NS26 97 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 TP53TG3Q9ULZ0 132 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 Q6ZS46 218 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
PCDHGC3-201ENST00000308177 PSMB8P28062 276 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 MTORP42345 2549 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 A0A096LPF7 62 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 AVPP01185 164 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 HIST2H2BCQ6DN03 193 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 ZFAND2AQ8N6M9 145 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 ODF3Q96PU9 254 aa8.62□□□□□ -1.03
PCDHGC3-201ENST00000308177 FASNP49327 2511 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms