RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 CFC1BP0CG36 223 aa12.51□□□□□ -0.41
BRD3-201ENST00000303407 CFC1P0CG37 223 aa12.51□□□□□ -0.41
BRD3-201ENST00000303407 GDF5OSQ5U4N7 250 aa12.51□□□□□ -0.41
BRD3-201ENST00000303407 F8WEM9 126 aa12.51□□□□□ -0.41
BRD3-201ENST00000303407 Q6ZQT7 251 aa12.51□□□□□ -0.41
BRD3-201ENST00000303407 SLC25A29Q8N8R3 303 aa12.5□□□□□ -0.41
BRD3-201ENST00000303407 FREM1Q5H8C1 2179 aa12.5□□□□□ -0.41
BRD3-201ENST00000303407 A0A0J9YXV3 536 aa12.5□□□□□ -0.41
BRD3-201ENST00000303407 PRSS47A8MTI9 375 aa12.5□□□□□ -0.41
BRD3-201ENST00000303407 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
BRD3-201ENST00000303407 IGLL5B9A064 214 aa12.49□□□□□ -0.41
BRD3-201ENST00000303407 LY6LH3BQJ8 138 aa12.49□□□□□ -0.41
BRD3-201ENST00000303407 TNRC6AQ8NDV7 1962 aaKnown RBP12.49□□□□□ -0.41
BRD3-201ENST00000303407 FSTL3O95633 263 aa12.49□□□□□ -0.41
BRD3-201ENST00000303407 TTTY13Q9BZ97 58 aa12.49□□□□□ -0.41
BRD3-201ENST00000303407 EDA2RQ9HAV5 297 aa12.48□□□□□ -0.41
BRD3-201ENST00000303407 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
BRD3-201ENST00000303407 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
BRD3-201ENST00000303407 DAZ4Q86SG3 579 aaKnown RBP12.48□□□□□ -0.41
BRD3-201ENST00000303407 NKAPP1Q8N9T2 125 aa12.48□□□□□ -0.41
BRD3-201ENST00000303407 DAZ3Q9NR90 486 aaKnown RBP12.48□□□□□ -0.41
BRD3-201ENST00000303407 YPEL4Q96NS1 127 aa12.47□□□□□ -0.41
BRD3-201ENST00000303407 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
BRD3-201ENST00000303407 MLST8Q9BVC4 326 aa12.47□□□□□ -0.41
BRD3-201ENST00000303407 MDFICQ9P1T7 246 aa12.47□□□□□ -0.41
BRD3-201ENST00000303407 HERV-K104P63124 156 aa12.47□□□□□ -0.41
BRD3-201ENST00000303407 LOXL1Q08397 574 aaPredicted RBP12.47□□□□□ -0.41
BRD3-201ENST00000303407 ODF1Q14990 250 aa12.46□□□□□ -0.41
BRD3-201ENST00000303407 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.41
BRD3-201ENST00000303407 A0A0J9YX75 114 aa12.46□□□□□ -0.41
BRD3-201ENST00000303407 TNFRSF13BO14836 293 aaPredicted RBP12.46□□□□□ -0.41
BRD3-201ENST00000303407 FXYD2P54710 66 aa12.46□□□□□ -0.41
BRD3-201ENST00000303407 GYPEP15421 78 aa12.46□□□□□ -0.42
BRD3-201ENST00000303407 HIGD1BQ9P298 99 aa12.45□□□□□ -0.42
BRD3-201ENST00000303407 CRLF1O75462 422 aa12.45□□□□□ -0.42
BRD3-201ENST00000303407 WNK2Q9Y3S1 2297 aa12.45□□□□□ -0.42
BRD3-201ENST00000303407 CACNA1BQ00975 2339 aa12.45□□□□□ -0.42
BRD3-201ENST00000303407 C5orf38Q86SI9 138 aa12.44□□□□□ -0.42
BRD3-201ENST00000303407 TIMM17AQ99595 171 aa12.44□□□□□ -0.42
BRD3-201ENST00000303407 C11orf71Q6IPW1 123 aa12.44□□□□□ -0.42
BRD3-201ENST00000303407 NTN5Q8WTR8 489 aaPredicted RBP12.44□□□□□ -0.42
BRD3-201ENST00000303407 CITED1Q99966 193 aa12.44□□□□□ -0.42
BRD3-201ENST00000303407 TRAV25A0A0B4J276 109 aa12.44□□□□□ -0.42
BRD3-201ENST00000303407 E9PLD3 99 aa12.43□□□□□ -0.42
BRD3-201ENST00000303407 TAX1BP3O14907 124 aa12.43□□□□□ -0.42
BRD3-201ENST00000303407 ATP6V0E2Q8NHE4 81 aa12.43□□□□□ -0.42
BRD3-201ENST00000303407 MBD6Q96DN6 1003 aa12.43□□□□□ -0.42
BRD3-201ENST00000303407 TRBV7-3A0A075B6L6 115 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 IGLC6P0CF74 106 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 PCNX1Q96RV3 2341 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 C20orf173Q96LM9 149 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 CACNA1GO43497 2377 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 A4D1N5 150 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 IGF1P05019 195 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 C11orf86A6NJI1 115 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 IGHG4P01861 327 aa12.42□□□□□ -0.42
BRD3-201ENST00000303407 ARHGAP21Q5T5U3 1957 aa12.41□□□□□ -0.42
BRD3-201ENST00000303407 EBI3Q14213 229 aa12.41□□□□□ -0.42
BRD3-201ENST00000303407 TMEM61Q8N0U2 210 aa12.41□□□□□ -0.42
BRD3-201ENST00000303407 PIFOQ8TCI5 191 aa12.41□□□□□ -0.42
BRD3-201ENST00000303407 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
BRD3-201ENST00000303407 IFITM1P13164 125 aa12.4□□□□□ -0.42
BRD3-201ENST00000303407 MAP6D1Q9H9H5 199 aa12.4□□□□□ -0.42
BRD3-201ENST00000303407 ICOSQ9Y6W8 199 aa12.4□□□□□ -0.42
BRD3-201ENST00000303407 DNAJC9-AS1A6NH13 148 aa12.4□□□□□ -0.42
BRD3-201ENST00000303407 SH2D6Q7Z4S9 175 aa12.4□□□□□ -0.42
BRD3-201ENST00000303407 COX7B2Q8TF08 81 aa12.4□□□□□ -0.42
BRD3-201ENST00000303407 RMI2Q96E14 147 aa12.4□□□□□ -0.42
BRD3-201ENST00000303407 MYCNOSP40205 109 aa12.39□□□□□ -0.43
BRD3-201ENST00000303407 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
BRD3-201ENST00000303407 C15orf53Q8NAA6 179 aa12.39□□□□□ -0.43
BRD3-201ENST00000303407 IGKV2D-24A0A075B6R9 120 aa12.39□□□□□ -0.43
BRD3-201ENST00000303407 CRIP1P50238 77 aa12.39□□□□□ -0.43
BRD3-201ENST00000303407 OPRPNQ99935 248 aaPredicted RBP12.39□□□□□ -0.43
BRD3-201ENST00000303407 BAALC-AS2P0C853 105 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 DAND5Q8N907 189 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 TINCRA0A1B0GVN0 87 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 CDK2AP2O75956 126 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 TRAV4A0A0B4J268 109 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 SPATA12Q7Z6I5 190 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 UBL5Q9BZL1 73 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 IGLV10-54A0A075B6I4 117 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 MED12LQ86YW9 2145 aa12.38□□□□□ -0.43
BRD3-201ENST00000303407 ATP5G1P05496 136 aa12.37□□□□□ -0.43
BRD3-201ENST00000303407 Q6YL49 198 aa12.37□□□□□ -0.43
BRD3-201ENST00000303407 DSCR8Q96T75 97 aa12.37□□□□□ -0.43
BRD3-201ENST00000303407 HHLA3Q9XRX5 114 aa12.37□□□□□ -0.43
BRD3-201ENST00000303407 IGHV4-31P0DP07 118 aa12.37□□□□□ -0.43
BRD3-201ENST00000303407 ESM1Q9NQ30 184 aa12.37□□□□□ -0.43
BRD3-201ENST00000303407 SPART-AS1P0CW21 52 aa12.37□□□□□ -0.43
BRD3-201ENST00000303407 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
BRD3-201ENST00000303407 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
BRD3-201ENST00000303407 C9orf153Q5TBE3 101 aa12.36□□□□□ -0.43
BRD3-201ENST00000303407 C20orf203Q8NBC4 194 aa12.36□□□□□ -0.43
BRD3-201ENST00000303407 MRAPQ8TCY5 172 aa12.36□□□□□ -0.43
BRD3-201ENST00000303407 CACNA1HO95180 2353 aa12.36□□□□□ -0.43
BRD3-201ENST00000303407 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
BRD3-201ENST00000303407 ATG2AQ2TAZ0 1938 aa12.36□□□□□ -0.43
BRD3-201ENST00000303407 MRPL23Q16540 153 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms