RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 HIST2H2BDQ6DRA6 164 aa13.21□□□□□ -0.29
CHRNA5-201ENST00000299565 AJUBAQ96IF1 538 aa13.21□□□□□ -0.29
CHRNA5-201ENST00000299565 IGHV7-4-1A0A0J9YVY3 117 aa13.21□□□□□ -0.3
CHRNA5-201ENST00000299565 AZU1P20160 251 aa13.21□□□□□ -0.3
CHRNA5-201ENST00000299565 FLNCQ14315 2725 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 RASL10AQ92737 203 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 RBAKDNA6NC62 111 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 C10orf99Q6UWK7 81 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 PTH2Q96A98 100 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 C11orf71Q6IPW1 123 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 NRACQ8N912 160 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 SPXQ9BT56 116 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 G3V4G9 280 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 DUX3Q96PT4 197 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 VCX2Q9H322 139 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 BAALCQ8WXS3 180 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 FOXI2Q6ZQN5 318 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 PLEKHB2Q96CS7 222 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 NDUFA4O00483 81 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 TMEM190Q8WZ59 177 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 EBI3Q14213 229 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 C11orf86A6NJI1 115 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 VCYO14598 125 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 ZFAND2AQ8N6M9 145 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 NDUFS8O00217 210 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 HRNRQ86YZ3 2850 aaPredicted RBP13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 PPP1R17O96001 155 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 PHLDA1Q8WV24 401 aaPredicted RBP13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 PRM2P04554 102 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 INSL3P51460 131 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 IGHV3-16A0A0C4DH30 117 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 IGKV3OR2-268A0A0C4DH90 116 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 SUMO4Q6EEV6 95 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 UFSP1Q6NVU6 142 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 ITLN2Q8WWU7 325 aaPredicted RBP13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 DOPEY1Q5JWR5 2465 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 CRYBG3Q68DQ2 2970 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 ZFP2Q6ZN57 461 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 DLX4Q92988 240 aaPredicted RBP13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 IGHV3-38A0A0C4DH36 116 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 LYRM7Q5U5X0 104 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 USMG5Q96IX5 58 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 HIGD1BQ9P298 99 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 CD28P10747 220 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 PMVKQ15126 192 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 DYNLRB2Q8TF09 96 aa13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 ZNF625Q96I27 306 aaPredicted RBP13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 MSMBP08118 114 aa13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 F8W1H4 67 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 CNFNQ9BYD5 112 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 ZANQ9Y493 2812 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 DEFB131AP59861 70 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 TOMM6Q96B49 74 aa13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 C9JAW5 83 aa13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 Q8N1Y9 231 aa13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 GEMIN7Q9H840 131 aaKnown RBP13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 J3QQQ9 107 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 P0DMU3 169 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 LINC01587Q99440 93 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 TM2D2Q9BX73 214 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 MRPL53Q96EL3 112 aaKnown RBP13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 IGLV2-18A0A075B6J9 118 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 E9PLD3 99 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 DEFB112Q30KQ8 113 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 IGHV3-53P01767 116 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 PAPPA-AS1Q5QFB9 102 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 A8MWV9 139 aa13.07□□□□□ -0.32
CHRNA5-201ENST00000299565 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
CHRNA5-201ENST00000299565 LENEPQ9Y5L5 61 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 ERG28Q9UKR5 140 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 B4DSR2 109 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 SRSF2Q01130 221 aaKnown RBP13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
CHRNA5-201ENST00000299565 TAL2Q16559 108 aa13.05□□□□□ -0.32
CHRNA5-201ENST00000299565 A0A1B0GV72 72 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms