RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CDKN1BP46527 198 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 TMEM170BQ5T4T1 132 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 LINC01545Q5VT33 79 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 Q8N8P6 123 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 RPL39P62891 51 aaKnown RBP6.96□□□□□ -1.29
PRDM9-201ENST00000296682 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.29
PRDM9-201ENST00000296682 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.29
PRDM9-201ENST00000296682 KIR2DL4Q99706 377 aa6.96□□□□□ -1.29
PRDM9-201ENST00000296682 IGHV3-38A0A0C4DH36 116 aa6.96□□□□□ -1.3
PRDM9-201ENST00000296682 RPL35AP18077 110 aaKnown RBP6.96□□□□□ -1.3
PRDM9-201ENST00000296682 C2orf66Q6UXQ4 117 aa6.96□□□□□ -1.3
PRDM9-201ENST00000296682 PHLDA1Q8WV24 401 aaPredicted RBP6.96□□□□□ -1.3
PRDM9-201ENST00000296682 UBR5O95071 2799 aaPredicted RBP6.96□□□□□ -1.3
PRDM9-201ENST00000296682 LINC01619G3V211 115 aa6.96□□□□□ -1.3
PRDM9-201ENST00000296682 ELANEP08246 267 aa6.96□□□□□ -1.3
PRDM9-201ENST00000296682 AMMECR1LQ6DCA0 310 aa6.96□□□□□ -1.3
PRDM9-201ENST00000296682 DCANP1Q8TF63 244 aa6.96□□□□□ -1.3
PRDM9-201ENST00000296682 SMIM2Q9BVW6 85 aa6.96□□□□□ -1.3
PRDM9-201ENST00000296682 SAP30O75446 220 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 ATP5LO75964 103 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 DPM2O94777 84 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 P0DMU3 169 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 FAM231CP0DMU5 169 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 RNASE3P12724 160 aaKnown RBP6.95□□□□□ -1.3
PRDM9-201ENST00000296682 TMEM97Q5BJF2 176 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
PRDM9-201ENST00000296682 H3BUT2 72 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 PROK1P58294 105 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 CFHR3Q02985 330 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 SDHAF1A6NFY7 115 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 J3QKU1 62 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 GAGE1Q13065 139 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 SYT8Q8NBV8 401 aa6.95□□□□□ -1.3
PRDM9-201ENST00000296682 IGHV1OR15-1A0A075B7D0 117 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 RASL10AQ92737 203 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 TP53TG1Q9Y2A0 90 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 MRPS16Q9Y3D3 137 aaKnown RBP6.94□□□□□ -1.3
PRDM9-201ENST00000296682 A0A0J9YX75 114 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 DUSP14O95147 198 aaKnown RBP6.94□□□□□ -1.3
PRDM9-201ENST00000296682 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRDM9-201ENST00000296682 RAX2Q96IS3 184 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 HIST1H4GQ99525 98 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 CITED2Q99967 270 aaPredicted RBP6.94□□□□□ -1.3
PRDM9-201ENST00000296682 PEMTQ9UBM1 199 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
PRDM9-201ENST00000296682 IGHV4-4A0A075B6R2 117 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 DNAJC9-AS1A6NH13 148 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 COX8AP10176 69 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 CD28P10747 220 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 FAM19A4Q96LR4 140 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 SCRT2Q9NQ03 307 aa6.94□□□□□ -1.3
PRDM9-201ENST00000296682 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
PRDM9-201ENST00000296682 NBPF19A0A087WUL8 3843 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 IGKV3OR2-268A0A0C4DH90 116 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 SOCS3O14543 225 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 BVES-AS1Q5T3Y7 98 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 Q6ZSV7 163 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 STHQ8IWL8 128 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 OR9G4Q8NGQ1 327 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 MRPL16Q9NX20 251 aaKnown RBP6.93□□□□□ -1.3
PRDM9-201ENST00000296682 K7EMT4 169 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 LGALS9CQ6DKI2 356 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 MUC4Q99102 2169 aa6.93□□□□□ -1.3
PRDM9-201ENST00000296682 OR11H12B2RN74 326 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 K7EQG2 157 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 K7ERJ3 54 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 NRACQ8N912 160 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 OR11H2Q8NH07 326 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 CYSLTR1Q9Y271 337 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 ORMDL2Q53FV1 153 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 TENM4Q6N022 2769 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 F8P00451 2351 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 ODF1Q14990 250 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 WFDC10AQ9H1F0 79 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 LENEPQ9Y5L5 61 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 TNFRSF18Q9Y5U5 241 aa6.92□□□□□ -1.3
PRDM9-201ENST00000296682 PRSS29PA6NIE9 313 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 H7C2G1 150 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 DGAT2L7PQ6IED9 249 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 CEMP1Q6PRD7 247 aaPredicted RBP6.91□□□□□ -1.3
PRDM9-201ENST00000296682 COX11Q9Y6N1 276 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 TRGV1A0A0A0MS02 117 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 CCL24O00175 119 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 RNF152Q8N8N0 203 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 MRAP2Q96G30 205 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 A0A096LNT2 108 aa6.91□□□□□ -1.3
PRDM9-201ENST00000296682 GAGE10A6NGK3 116 aa6.9□□□□□ -1.3
PRDM9-201ENST00000296682 MTURNQ8N3F0 131 aa6.9□□□□□ -1.3
PRDM9-201ENST00000296682 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
PRDM9-201ENST00000296682 TRBV7-9A0A0J9YWB2 115 aa6.9□□□□□ -1.3
PRDM9-201ENST00000296682 A6NDN8 102 aa6.9□□□□□ -1.3
PRDM9-201ENST00000296682 CCL25O15444 150 aa6.9□□□□□ -1.3
PRDM9-201ENST00000296682 ORAOV1Q8WV07 137 aa6.9□□□□□ -1.3
PRDM9-201ENST00000296682 A0A0U1RRA0 63 aa6.9□□□□□ -1.31
PRDM9-201ENST00000296682 VCYO14598 125 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms