RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 DEFB114Q30KQ6 69 aa6.85□□□□□ -1.31
CLRN1-201ENST00000295911 ZNF418Q8TF45 676 aaPredicted RBP6.85□□□□□ -1.31
CLRN1-201ENST00000295911 SPAG8Q99932 426 aaPredicted RBP6.85□□□□□ -1.31
CLRN1-201ENST00000295911 ZMAT5Q9UDW3 170 aaKnown RBP6.85□□□□□ -1.31
CLRN1-201ENST00000295911 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
CLRN1-201ENST00000295911 MXRA5Q9NR99 2828 aa6.85□□□□□ -1.31
CLRN1-201ENST00000295911 SVEP1Q4LDE5 3571 aa6.85□□□□□ -1.31
CLRN1-201ENST00000295911 TRAV12-2A0A075B6T6 113 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 H3BMM0 161 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 BATFQ16520 125 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 TMEM61Q8N0U2 210 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 Q8N1Y9 231 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 C18orf15Q96N68 181 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 ESM1Q9NQ30 184 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 TSSC4Q9Y5U2 329 aaPredicted RBP6.84□□□□□ -1.31
CLRN1-201ENST00000295911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
CLRN1-201ENST00000295911 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
CLRN1-201ENST00000295911 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.32
CLRN1-201ENST00000295911 CCL24O00175 119 aa6.84□□□□□ -1.32
CLRN1-201ENST00000295911 TCAPO15273 167 aa6.84□□□□□ -1.32
CLRN1-201ENST00000295911 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.32
CLRN1-201ENST00000295911 LINC00315P59091 139 aa6.84□□□□□ -1.32
CLRN1-201ENST00000295911 FHL3Q13643 280 aa6.84□□□□□ -1.32
CLRN1-201ENST00000295911 C12orf54Q6X4T0 127 aa6.84□□□□□ -1.32
CLRN1-201ENST00000295911 TOMM6Q96B49 74 aa6.84□□□□□ -1.32
CLRN1-201ENST00000295911 RAX2Q96IS3 184 aa6.84□□□□□ -1.32
CLRN1-201ENST00000295911 CBY3A6NI87 242 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 KNCNA6PVL3 124 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 F5H697 171 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 VCYO14598 125 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 DLEU1O43261 78 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 SPRY2O43597 315 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 ODF1Q14990 250 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 PIK3CD-AS1Q5SR53 167 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 RPL39LQ96EH5 51 aaKnown RBP6.83□□□□□ -1.32
CLRN1-201ENST00000295911 DUX3Q96PT4 197 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 JMJD8Q96S16 334 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 LINC00467Q9BRT7 94 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 CSTL1Q9H114 145 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 MAP6D1Q9H9H5 199 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 MDFICQ9P1T7 246 aa6.83□□□□□ -1.32
CLRN1-201ENST00000295911 SORL1Q92673 2214 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 TRAV12-1A0A0B4J245 112 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 TRBV6-5A0A0K0K1A5 114 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 SIVA1O15304 175 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 DPM2O94777 84 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 NDUFA7O95182 113 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 IGKCP01834 107 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 CD28P10747 220 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 CD300EQ496F6 205 aaPredicted RBP6.82□□□□□ -1.32
CLRN1-201ENST00000295911 SUMO4Q6EEV6 95 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 LINC01006Q8NI28 216 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 PTH2Q96A98 100 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 SCGB3A1Q96QR1 104 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 DKK2Q9UBU2 259 aa6.82□□□□□ -1.32
CLRN1-201ENST00000295911 A0A087WWL8 130 aa6.81□□□□□ -1.32
CLRN1-201ENST00000295911 A0A087WX48 190 aa6.81□□□□□ -1.32
CLRN1-201ENST00000295911 PLNP26678 52 aa6.81□□□□□ -1.32
CLRN1-201ENST00000295911 HINT1P49773 126 aaPredicted RBP6.81□□□□□ -1.32
CLRN1-201ENST00000295911 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
CLRN1-201ENST00000295911 HILS1P60008 231 aa6.81□□□□□ -1.32
CLRN1-201ENST00000295911 ZNF876PQ49A33 203 aa6.81□□□□□ -1.32
CLRN1-201ENST00000295911 LINC00469Q8N7U9 141 aa6.81□□□□□ -1.32
CLRN1-201ENST00000295911 KIR2DL4Q99706 377 aa6.81□□□□□ -1.32
CLRN1-201ENST00000295911 ZNF256Q9Y2P7 627 aaPredicted RBP6.81□□□□□ -1.32
CLRN1-201ENST00000295911 PDZD2O15018 2839 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 H7C1H1 209 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 CRYGDP07320 174 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 ZNF415Q09FC8 603 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 ERASQ7Z444 233 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 TRPT1Q86TN4 253 aaKnown RBP6.8□□□□□ -1.32
CLRN1-201ENST00000295911 BOD1L2Q8IYS8 172 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 STPG4Q8N801 248 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 CITED2Q99967 270 aaPredicted RBP6.8□□□□□ -1.32
CLRN1-201ENST00000295911 JPT2Q9H910 190 aa6.8□□□□□ -1.32
CLRN1-201ENST00000295911 CSMD2Q7Z408 3487 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 A0A1W2PRX2 142 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 A8MWV9 139 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 M0QY20 66 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 M0R2P5 195 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 INSP01308 110 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 ZNF56Q15929 161 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 FAM74A4Q5TZK3 123 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 C2orf66Q6UXQ4 117 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 SPXQ9BT56 116 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 HHLA3Q9XRX5 114 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 CYSLTR1Q9Y271 337 aa6.79□□□□□ -1.32
CLRN1-201ENST00000295911 RBMY1BA6NDE4 496 aaKnown RBP6.78□□□□□ -1.32
CLRN1-201ENST00000295911 RBMY1EA6NEQ0 496 aaKnown RBP6.78□□□□□ -1.32
CLRN1-201ENST00000295911 SDHAF1A6NFY7 115 aa6.78□□□□□ -1.32
CLRN1-201ENST00000295911 OR11H12B2RN74 326 aa6.78□□□□□ -1.32
CLRN1-201ENST00000295911 F8VRH5 84 aa6.78□□□□□ -1.32
CLRN1-201ENST00000295911 RBMY1DP0C7P1 496 aaKnown RBP6.78□□□□□ -1.32
CLRN1-201ENST00000295911 FGF6P10767 208 aa6.78□□□□□ -1.32
CLRN1-201ENST00000295911 RHOHQ15669 191 aa6.78□□□□□ -1.32
CLRN1-201ENST00000295911 MPV17L2Q567V2 206 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms