RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 RIPPLY3P57055 190 aa11.79□□□□□ -0.52
NCKIPSD-201ENST00000294129 UFSP1Q6NVU6 142 aa11.79□□□□□ -0.52
NCKIPSD-201ENST00000294129 Q96MF0 132 aa11.79□□□□□ -0.52
NCKIPSD-201ENST00000294129 J3QLI3 93 aa11.79□□□□□ -0.52
NCKIPSD-201ENST00000294129 OR9G4Q8NGQ1 327 aa11.79□□□□□ -0.52
NCKIPSD-201ENST00000294129 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
NCKIPSD-201ENST00000294129 C2orf66Q6UXQ4 117 aa11.78□□□□□ -0.52
NCKIPSD-201ENST00000294129 APRG1Q8IVJ8 170 aa11.78□□□□□ -0.52
NCKIPSD-201ENST00000294129 ZMAT4Q9H898 229 aa11.78□□□□□ -0.52
NCKIPSD-201ENST00000294129 Q6YL49 198 aa11.78□□□□□ -0.52
NCKIPSD-201ENST00000294129 A0A087WX48 190 aa11.77□□□□□ -0.52
NCKIPSD-201ENST00000294129 A0A0J9YX75 114 aa11.77□□□□□ -0.52
NCKIPSD-201ENST00000294129 EMP1P54849 157 aa11.77□□□□□ -0.52
NCKIPSD-201ENST00000294129 ORMDL2Q53FV1 153 aa11.77□□□□□ -0.52
NCKIPSD-201ENST00000294129 TCTEX1D4Q5JR98 221 aa11.77□□□□□ -0.53
NCKIPSD-201ENST00000294129 Q8N1Y9 231 aa11.77□□□□□ -0.53
NCKIPSD-201ENST00000294129 NACAE9PAV3 2078 aa11.77□□□□□ -0.53
NCKIPSD-201ENST00000294129 KNCNA6PVL3 124 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 K7EP34 96 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 K7EQG2 157 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 SUMO4Q6EEV6 95 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 C11orf44Q8N8P7 122 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 PRSS47A8MTI9 375 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 PRM2P04554 102 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 DEFB113Q30KQ7 82 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 MAPKAPK5-AS1Q8N8E1 139 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 C20orf78Q9BR46 151 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 ZNF256Q9Y2P7 627 aaPredicted RBP11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 JMJD1CQ15652 2540 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 ZNF56Q15929 161 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 CHTOPQ9Y3Y2 248 aaKnown RBP11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 SPCS1Q9Y6A9 102 aa11.76□□□□□ -0.53
NCKIPSD-201ENST00000294129 SIVA1O15304 175 aa11.75□□□□□ -0.53
NCKIPSD-201ENST00000294129 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
NCKIPSD-201ENST00000294129 CHAC1Q9BUX1 264 aa11.75□□□□□ -0.53
NCKIPSD-201ENST00000294129 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
NCKIPSD-201ENST00000294129 MED14OSP0DP75 135 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 FXYD2P54710 66 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 TOMM6Q96B49 74 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 ZNF580Q9UK33 172 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 TRBV7-9A0A0J9YWB2 115 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 A0A1W2PPM0 123 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 K7ERJ3 54 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 ELANEP08246 267 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 LINC00315P59091 139 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 RPL39P62891 51 aaKnown RBP11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 KIF25-AS1Q9Y6Z4 181 aa11.74□□□□□ -0.53
NCKIPSD-201ENST00000294129 F8VRH5 84 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 H7C1H1 209 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 IGHV3-16A0A0C4DH30 117 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 DEFB131AP59861 70 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 IGHV3-73A0A0B4J1V6 119 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 OR11H1Q8NG94 326 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
NCKIPSD-201ENST00000294129 NIPBLQ6KC79 2804 aaeCLIP11.72□□□□□ -0.53
NCKIPSD-201ENST00000294129 SDHAF1A6NFY7 115 aa11.72□□□□□ -0.53
NCKIPSD-201ENST00000294129 PLNP26678 52 aa11.72□□□□□ -0.53
NCKIPSD-201ENST00000294129 IGHV1OR15-1A0A075B7D0 117 aa11.71□□□□□ -0.53
NCKIPSD-201ENST00000294129 PRSS29PA6NIE9 313 aa11.71□□□□□ -0.53
NCKIPSD-201ENST00000294129 SMIM13P0DJ93 91 aa11.71□□□□□ -0.53
NCKIPSD-201ENST00000294129 SAMD5Q5TGI4 173 aa11.71□□□□□ -0.53
NCKIPSD-201ENST00000294129 FSHBP01225 129 aa11.71□□□□□ -0.54
NCKIPSD-201ENST00000294129 FABP2P12104 132 aa11.71□□□□□ -0.54
NCKIPSD-201ENST00000294129 ZNF876PQ49A33 203 aa11.71□□□□□ -0.54
NCKIPSD-201ENST00000294129 TENM4Q6N022 2769 aa11.71□□□□□ -0.54
NCKIPSD-201ENST00000294129 TMEM89A2RUT3 159 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 G3V4G9 280 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 NXPH4O95158 308 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 NEXN-AS1Q8NBZ9 246 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 NHP2Q9NX24 153 aaKnown RBP11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 A0A1W2PRX2 142 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 ITPR2Q14571 2701 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 ZFP2Q6ZN57 461 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
NCKIPSD-201ENST00000294129 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 PPP1R17O96001 155 aa11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 CD300EQ496F6 205 aaPredicted RBP11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 SYT8Q8NBV8 401 aa11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 KLHL30-AS1Q8NEE0 82 aa11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
NCKIPSD-201ENST00000294129 LGALS9O00182 355 aa11.68□□□□□ -0.54
NCKIPSD-201ENST00000294129 RPL24P83731 157 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-201ENST00000294129 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
NCKIPSD-201ENST00000294129 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
NCKIPSD-201ENST00000294129 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
NCKIPSD-201ENST00000294129 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
NCKIPSD-201ENST00000294129 TRAV12-1A0A0B4J245 112 aa11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 SCGB2A2Q13296 93 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 816.8 ms