RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 TSKUQ8WUA8 353 aa6.06□□□□□ -1.44
TFF1-201ENST00000291527 TMEM263Q8WUH6 116 aaKnown RBP6.06□□□□□ -1.44
TFF1-201ENST00000291527 C16orf74Q96GX8 76 aa6.06□□□□□ -1.44
TFF1-201ENST00000291527 PACRGQ96M98 296 aaPredicted RBP6.06□□□□□ -1.44
TFF1-201ENST00000291527 SCRT2Q9NQ03 307 aa6.06□□□□□ -1.44
TFF1-201ENST00000291527 PPP1R14DQ9NXH3 145 aa6.06□□□□□ -1.44
TFF1-201ENST00000291527 TP53TG3Q9ULZ0 132 aa6.06□□□□□ -1.44
TFF1-201ENST00000291527 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
TFF1-201ENST00000291527 A0A096LPF7 62 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 PHOX2AO14813 284 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 CCL18P55774 89 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 OR10J3Q5JRS4 329 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 Q8N1X5 172 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 TMEM256Q8N2U0 113 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 C11orf72Q8NBR9 251 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 BORCS7Q96B45 105 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 MRPL53Q96EL3 112 aaKnown RBP6.05□□□□□ -1.44
TFF1-201ENST00000291527 NDFIP1Q9BT67 221 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 MLST8Q9BVC4 326 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 RPP21Q9H633 154 aaKnown RBP6.05□□□□□ -1.44
TFF1-201ENST00000291527 GSN-AS1Q9NRJ2 163 aa6.05□□□□□ -1.44
TFF1-201ENST00000291527 RBAKDNA6NC62 111 aa6.04□□□□□ -1.44
TFF1-201ENST00000291527 PGPEP1LA6NFU8 196 aa6.04□□□□□ -1.44
TFF1-201ENST00000291527 ZNF324O75467 553 aaPredicted RBP6.04□□□□□ -1.44
TFF1-201ENST00000291527 IGLV2-8P01709 118 aa6.04□□□□□ -1.44
TFF1-201ENST00000291527 RPS20P60866 119 aaKnown RBP6.04□□□□□ -1.44
TFF1-201ENST00000291527 Q0VG73 95 aa6.04□□□□□ -1.44
TFF1-201ENST00000291527 COX8CQ7Z4L0 72 aa6.04□□□□□ -1.44
TFF1-201ENST00000291527 Q86TA4 180 aa6.04□□□□□ -1.44
TFF1-201ENST00000291527 HIST3H2BBQ8N257 126 aa6.04□□□□□ -1.44
TFF1-201ENST00000291527 SNURFLB1AK76 121 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 DIRC3C9JPN6 131 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 NPIPB6E9PJ23 425 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 IGHV3-53P01767 116 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 RAB4AP20338 218 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 LINC00315P59091 139 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 ZNF493Q6ZR52 646 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 EXOC3-AS1Q8N2X6 119 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 NUDT10Q8NFP7 164 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 NUDT11Q96G61 164 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 FAM19A4Q96LR4 140 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 MRPL18Q9H0U6 180 aaKnown RBP6.03□□□□□ -1.44
TFF1-201ENST00000291527 RNASE7Q9H1E1 156 aaKnown RBP6.03□□□□□ -1.44
TFF1-201ENST00000291527 PSG8Q9UQ74 426 aa6.03□□□□□ -1.44
TFF1-201ENST00000291527 MRPS16Q9Y3D3 137 aaKnown RBP6.03□□□□□ -1.44
TFF1-201ENST00000291527 IGKV2-40A0A087WW87 121 aaPredicted RBP6.02□□□□□ -1.45
TFF1-201ENST00000291527 C19orf71A6NCJ1 209 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 IGKV2D-40P01614 121 aaPredicted RBP6.02□□□□□ -1.45
TFF1-201ENST00000291527 DNAH10OSP0CZ25 163 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 ESDP10768 282 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 CRISP2P16562 243 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 FOXA3P55318 350 aaPredicted RBP6.02□□□□□ -1.45
TFF1-201ENST00000291527 XGP55808 180 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 GOLT1AQ6ZVE7 132 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 OR10J6PQ8NGY7 276 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 VGLL1Q99990 258 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 UPK3BQ9BT76 320 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 RPH3ALQ9UNE2 315 aa6.02□□□□□ -1.45
TFF1-201ENST00000291527 TRAV34A0A0B4J273 112 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 C7orf71A4D174 169 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 APCSP02743 223 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 RNASE4P34096 147 aaKnown RBP6.01□□□□□ -1.45
TFF1-201ENST00000291527 RAB4BP61018 213 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 GNG5P63218 68 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 HBBP68871 147 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 HAMPP81172 84 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 DAZ2Q13117 558 aaKnown RBP6.01□□□□□ -1.45
TFF1-201ENST00000291527 RIGQ13278 110 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 PRR27Q6MZM9 219 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 PRNTQ86SH4 94 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 BAGE3Q86Y29 109 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 ZFAND2AQ8N6M9 145 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 MRPL16Q9NX20 251 aaKnown RBP6.01□□□□□ -1.45
TFF1-201ENST00000291527 LENEPQ9Y5L5 61 aa6.01□□□□□ -1.45
TFF1-201ENST00000291527 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
TFF1-201ENST00000291527 TRGV1A0A0A0MS02 117 aa6□□□□□ -1.45
TFF1-201ENST00000291527 HIGD1CA8MV81 97 aa6□□□□□ -1.45
TFF1-201ENST00000291527 KLLNB2CW77 178 aa6□□□□□ -1.45
TFF1-201ENST00000291527 SPINK4O60575 86 aa6□□□□□ -1.45
TFF1-201ENST00000291527 FABP4P15090 132 aa6□□□□□ -1.45
TFF1-201ENST00000291527 LEPP41159 167 aa6□□□□□ -1.45
TFF1-201ENST00000291527 KRTAP10-1P60331 282 aa6□□□□□ -1.45
TFF1-201ENST00000291527 IQCJQ1A5X6 159 aa6□□□□□ -1.45
TFF1-201ENST00000291527 TMEM136Q6ZRR5 245 aa6□□□□□ -1.45
TFF1-201ENST00000291527 NUP35Q8NFH5 326 aa6□□□□□ -1.45
TFF1-201ENST00000291527 OR10D4PQ8NGN7 298 aa6□□□□□ -1.45
TFF1-201ENST00000291527 LINC00479Q96M42 142 aa6□□□□□ -1.45
TFF1-201ENST00000291527 HIST1H2BLQ99880 126 aa6□□□□□ -1.45
TFF1-201ENST00000291527 C20orf144Q9BQM9 153 aa6□□□□□ -1.45
TFF1-201ENST00000291527 NIT2Q9NQR4 276 aa6□□□□□ -1.45
TFF1-201ENST00000291527 TRBV7-9A0A0J9YWB2 115 aa5.99□□□□□ -1.45
TFF1-201ENST00000291527 NXPH4O95158 308 aa5.99□□□□□ -1.45
TFF1-201ENST00000291527 IGLV2-11P01706 119 aa5.99□□□□□ -1.45
TFF1-201ENST00000291527 FHL2Q14192 279 aa5.99□□□□□ -1.45
TFF1-201ENST00000291527 JOSD1Q15040 202 aaPredicted RBP5.99□□□□□ -1.45
TFF1-201ENST00000291527 OR2D3Q8NGH3 330 aa5.99□□□□□ -1.45
TFF1-201ENST00000291527 Q8TAT8 98 aa5.99□□□□□ -1.45
TFF1-201ENST00000291527 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
TFF1-201ENST00000291527 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms